Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018615 Camellia sinensis var. sinensis HOM05D000445 ORTHO05D000314 6.5e-24 113.2 57 100.0
Nitab4.5_0009685g0030 Nicotiana tabacum HOM05D003033 ORTHO05D003475 1.2e-09 65.9 54 64.8
Nitab4.5_0000496g0040 Nicotiana tabacum HOM05D000580 ORTHO05D001785 5.0e-08 60.5 33 81.8
Nitab4.5_0001761g0320 Nicotiana tabacum HOM05D000445 ORTHO05D000314 5.0e-08 60.5 33 81.8
CAN.G1648.15 Capsicum annuum HOM05D000445 ORTHO05D000314 6.5e-08 60.1 32 84.4
CAN.G210.9 Capsicum annuum HOM05D000445 ORTHO05D000314 6.5e-08 60.1 32 84.4
CAN.G8.28 Capsicum annuum HOM05D000445 ORTHO05D000314 6.5e-08 60.1 33 81.8
Gohir.A04G039060 Gossypium hirsutum HOM05D000445 ORTHO05D000314 6.5e-08 60.1 32 84.4
Hma1.2p1_0192F.1_g083690 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 6.5e-08 60.1 32 84.4
Nitab4.5_0005100g0090 Nicotiana tabacum HOM05D000445 ORTHO05D000314 6.5e-08 60.1 32 84.4
Peaxi162Scf00147g00312 Petunia axillaris HOM05D000445 ORTHO05D010350 6.5e-08 60.1 32 84.4
Solyc00g500037.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 6.5e-08 60.1 32 84.4
Solyc00g500046.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 6.5e-08 60.1 32 84.4
Solyc00g500081.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 6.5e-08 60.1 32 84.4
Solyc00g500128.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 6.5e-08 60.1 32 84.4
Solyc00g500198.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 6.5e-08 60.1 32 84.4
Solyc00g500327.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 6.5e-08 60.1 32 84.4
Solyc03g078010.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 6.5e-08 60.1 32 84.4
PGSC0003DMG400015060 Solanum tuberosum HOM05D000445 ORTHO05D000314 6.5e-08 60.1 32 84.4
arahy.Tifrunner.gnm1.ann1.QI67VD Arachis hypogaea HOM05D000445 ORTHO05D000314 1.4e-07 58.9 32 84.4
arahy.Tifrunner.gnm1.ann1.U896IL Arachis hypogaea HOM05D000445 ORTHO05D000314 1.4e-07 58.9 32 84.4
arahy.Tifrunner.gnm1.ann1.Z1U5RE Arachis hypogaea HOM05D000445 ORTHO05D000314 1.4e-07 58.9 32 84.4
Nitab4.5_0003101g0070 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.9e-07 58.5 32 81.2
PGR111G0085 Punica granatum HOM05D000445 ORTHO05D000314 1.9e-07 58.5 32 81.2
PGR111G0100 Punica granatum HOM05D000445 ORTHO05D000314 1.9e-07 58.5 32 81.2
unitig_91.g26489 Utricularia gibba HOM05D000445 ORTHO05D000314 1.9e-07 58.5 32 81.2
unitig_91.g26515 Utricularia gibba HOM05D000445 ORTHO05D000314 1.9e-07 58.5 32 81.2
unitig_91.g26530 Utricularia gibba HOM05D000445 ORTHO05D000314 1.9e-07 58.5 32 81.2
Lalb_Chr01g0014991 Lupinus albus HOM05D000445 ORTHO05D000314 2.5e-07 58.2 32 81.2
RcHm_v2.0_CPg0501801 Rosa chinensis HOM05D000445 ORTHO05D000314 2.5e-07 58.2 32 81.2
RcHm_v2.0_CPg0502611 Rosa chinensis HOM05D000445 ORTHO05D000314 2.5e-07 58.2 32 81.2
arahy.Tifrunner.gnm1.ann1.FTZ997 Arachis hypogaea HOM05D000445 ORTHO05D000314 4.2e-07 57.4 32 81.2
ATR0258G003 Amborella trichopoda HOM05D000445 ORTHO05D000314 5.5e-07 57.0 32 78.1
Lsat_1_v5_gn_3_13441 Lactuca sativa HOM05D000445 ORTHO05D000314 5.5e-07 57.0 32 81.2
Lsat_1_v5_gn_8_26500 Lactuca sativa HOM05D000445 ORTHO05D000314 5.5e-07 57.0 32 81.2
Lsat_1_v5_gn_9_85820 Lactuca sativa HOM05D000445 ORTHO05D000314 5.5e-07 57.0 32 81.2
HanXRQChr00c0165g0572211 Helianthus annuus HOM05D000445 ORTHO05D000314 7.2e-07 56.6 32 81.2
HanXRQChr00c0349g0573981 Helianthus annuus HOM05D000445 ORTHO05D000314 7.2e-07 56.6 32 81.2
HanXRQChr00c0394g0574511 Helianthus annuus HOM05D000445 ORTHO05D000314 7.2e-07 56.6 32 81.2
HanXRQChr00c0451g0574821 Helianthus annuus HOM05D000445 ORTHO05D000314 7.2e-07 56.6 32 81.2
HanXRQChr00c0524g0575411 Helianthus annuus HOM05D000445 ORTHO05D000314 7.2e-07 56.6 32 81.2
HanXRQChr01g0020161 Helianthus annuus HOM05D000445 ORTHO05D000314 7.2e-07 56.6 32 81.2
HanXRQChr04g0127431 Helianthus annuus HOM05D000445 ORTHO05D000314 7.2e-07 56.6 32 81.2
HanXRQChr05g0152501 Helianthus annuus HOM05D000445 ORTHO05D000314 7.2e-07 56.6 32 81.2
HanXRQChr11g0321171 Helianthus annuus HOM05D000445 ORTHO05D000314 7.2e-07 56.6 32 81.2
HanXRQChr11g0327091 Helianthus annuus HOM05D000445 ORTHO05D000314 7.2e-07 56.6 32 81.2
HanXRQChr12g0369911 Helianthus annuus HOM05D000445 ORTHO05D000314 7.2e-07 56.6 32 81.2
HanXRQChr13g0416601 Helianthus annuus HOM05D000445 ORTHO05D000314 7.2e-07 56.6 32 81.2
HanXRQCPg0580251 Helianthus annuus HOM05D000445 ORTHO05D000314 7.2e-07 56.6 32 81.2
HanXRQCPg0580471 Helianthus annuus HOM05D000445 ORTHO05D000314 7.2e-07 56.6 32 81.2
SGA_v2.0_scaffold2596G54158 Striga asiatica HOM05D000445 ORTHO05D000314 7.2e-07 56.6 27 92.6
CAN.G1738.15 Capsicum annuum HOM05D000445 ORTHO05D000314 9.4e-07 56.2 32 78.1
HanXRQChr00c0454g0574911 Helianthus annuus HOM05D000445 ORTHO05D000314 9.4e-07 56.2 27 92.6
SalBow1G2507 Salvia bowleyana HOM05D000445 ORTHO05D000314 9.4e-07 56.2 32 81.2
Nn269s46007 Nelumbo nucifera HOM05D000445 ORTHO05D000314 1.2e-06 55.8 32 81.2
Nn3g16153 Nelumbo nucifera HOM05D000445 ORTHO05D000314 1.2e-06 55.8 32 81.2
Nitab4.5_0007104g0070 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.2e-06 55.8 32 81.2
PSO548G0004 Papaver somniferum HOM05D000445 ORTHO05D000314 1.2e-06 55.8 32 81.2
PSO548G0115 Papaver somniferum HOM05D000445 ORTHO05D000314 1.2e-06 55.8 32 81.2
TAR383G0379 Trochodendron aralioides HOM05D000445 ORTHO05D000314 1.2e-06 55.8 32 81.2
CAN.G1298.13 Capsicum annuum HOM05D000445 ORTHO05D000314 1.6e-06 55.5 32 78.1
Nitab4.5_0020349g0020 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.6e-06 55.5 29 86.2
HanXRQChr11g0336111 Helianthus annuus HOM05D000445 ORTHO05D000314 2.1e-06 55.1 32 78.1
HanXRQChr11g0336131 Helianthus annuus HOM05D000445 ORTHO05D000314 2.1e-06 55.1 32 78.1
Lj2C1238G15 Lonicera japonica HOM05D000445 ORTHO05D000314 2.1e-06 55.1 32 78.1
Lj2C1239G59 Lonicera japonica HOM05D000445 ORTHO05D000314 2.1e-06 55.1 32 78.1
Lju5009C0G1 Lonicera japonica HOM05D000445 ORTHO05D000314 2.1e-06 55.1 32 78.1
LjContig00318g0009654 Lotus japonicus HOM05D000445 ORTHO05D000314 2.1e-06 55.1 32 75.0
LjContig00318g0022366 Lotus japonicus HOM05D000445 ORTHO05D000314 2.1e-06 55.1 32 75.0
LjContig00319g0026737 Lotus japonicus HOM05D000445 ORTHO05D000314 2.1e-06 55.1 32 75.0
Thhalv10001808m.g Eutrema salsugineum HOM05D000445 ORTHO05D000314 2.7e-06 54.7 32 81.2
Potri.013G143400 Populus trichocarpa HOM05D000445 ORTHO05D000314 3.6e-06 54.3 32 78.1
RcHm_v2.0_Chr2g0118451 Rosa chinensis HOM05D000445 ORTHO05D000314 4.7e-06 53.9 32 78.1
VMungo0942G0001 Vigna mungo HOM05D000445 ORTHO05D000314 6.1e-06 53.5 32 71.9
VMungo0976G0001 Vigna mungo HOM05D000445 ORTHO05D000314 6.1e-06 53.5 32 71.9


User provided reference genes

Program Settings