Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018590 Camellia sinensis var. sinensis HOM05D009481 ORTHO05D011450 3.3e-25 117.5 55 100.0
CSS0010273 Camellia sinensis var. sinensis HOM05D009481 ORTHO05D011450 7.9e-19 96.3 53 73.6
Migut.I00838 Erythranthe guttata HOM05D009481 ORTHO05D011450 1.9e-17 91.7 55 69.1
Hma1.2p1_0682F.1_g202580 Hydrangea macrophylla HOM05D009481 ORTHO05D011450 1.9e-17 91.7 51 74.5
PSO782G4431 Papaver somniferum HOM05D009481 ORTHO05D011450 2.8e-16 87.8 52 69.2
Hma1.2p1_0018F.1_g013080 Hydrangea macrophylla HOM05D009481 ORTHO05D011450 8.2e-16 86.3 51 74.5
Mapoly0083s0095 Marchantia polymorpha HOM05D009481 ORTHO05D011450 1.8e-15 85.1 53 66.0
Phvul.003G176000 Phaseolus vulgaris HOM05D009481 ORTHO05D011450 5.3e-15 83.6 50 72.0
Thecc.09G116600 Theobroma cacao HOM05D009481 ORTHO05D011450 4.5e-14 80.5 48 70.8
Os01g0178300 Oryza sativa ssp. japonica HOM05D009481 ORTHO05D011450 7.6e-14 79.7 48 70.8
GSVIVG01015452001 Vitis vinifera HOM05D009481 ORTHO05D011450 7.6e-14 79.7 45 71.1
Manes.16G064250 Manihot esculenta HOM05D009481 ORTHO05D011450 3.2e-12 74.3 53 64.2
Os05g0178300 Oryza sativa ssp. japonica HOM05D009481 ORTHO05D011450 2.1e-11 71.6 50 64.0
CiPaw.04G167400 Carya illinoinensis HOM05D009481 ORTHO05D011450 4.6e-11 70.5 40 72.5
Dinv36594 Davidia involucrata HOM05D002035 ORTHO05D002032 1.5e-09 65.5 38 65.8
Glyma.13G361300 Glycine max HOM05D009481 ORTHO05D011450 1.9e-09 65.1 51 56.9
Eucgr.F02575 Eucalyptus grandis HOM05D009481 ORTHO05D011450 4.3e-09 63.9 48 58.3
Sed0026684 Sechium edule HOM05D009481 ORTHO05D011450 5.7e-09 63.5 51 58.8
Glyma.15G012600 Glycine max HOM05D009481 ORTHO05D011450 9.7e-09 62.8 39 64.1
Os02g0208500 Oryza sativa ssp. japonica HOM05D009481 ORTHO05D011450 6.3e-08 60.1 47 61.7
Lalb_Chr22g0351151 Lupinus albus HOM05D009481 ORTHO05D011450 1.8e-07 58.5 51 60.8
Thecc.06G081800 Theobroma cacao HOM05D009481 ORTHO05D011450 6.9e-07 56.6 43 58.1
Os06g0143100 Oryza sativa ssp. japonica HOM05D009481 ORTHO05D011450 2.0e-06 55.1 33 63.6
CiPaw.02G152700 Carya illinoinensis HOM05D009481 ORTHO05D011450 5.9e-06 53.5 52 53.8


User provided reference genes

Program Settings