Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018588 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 3.8e-64 248.1 129 100.0
Dinv39980 Davidia involucrata HOM05D006100 ORTHO05D007539 2.8e-30 135.6 135 63.0
Actinidia19182 Actinidia chinensis HOM05D006100 ORTHO05D007539 6.8e-29 131.0 142 57.0
Duzib147G1001 Durio zibethinus HOM05D006100 ORTHO05D007539 2.6e-28 129.0 132 58.3
Haze_15098 Corylus avellana HOM05D006100 ORTHO05D007539 5.7e-28 127.9 127 56.7
QL06p045927 Quercus lobata HOM05D006100 ORTHO05D007539 1.3e-27 126.7 135 55.6
Thecc.01G036600 Theobroma cacao HOM05D006100 ORTHO05D007539 3.1e-26 122.1 134 58.2
COL.COLO4_22086 Corchorus olitorius HOM05D006100 ORTHO05D007539 1.0e-24 117.1 134 55.2
TWI09G0021 Tripterygium wilfordii HOM05D006100 ORTHO05D007539 1.5e-23 113.2 124 54.0
THA.LOC104821276 Tarenaya hassleriana HOM05D006100 ORTHO05D007539 1.9e-23 112.8 134 51.5
Prupe.7G153900 Prunus persica HOM05D006100 ORTHO05D007539 7.3e-23 110.9 133 51.9
MD15G1262900 Malus domestica HOM05D006100 ORTHO05D007539 9.5e-23 110.5 140 49.3
Atru.chr3.567 Acer truncatum HOM05D006100 ORTHO05D007539 2.8e-22 109.0 130 50.0
Gohir.A11G184500 Gossypium hirsutum HOM05D006100 ORTHO05D007539 4.7e-22 108.2 103 60.2
FvH4_1g13390 Fragaria vesca HOM05D006100 ORTHO05D007539 1.0e-21 107.1 119 48.7
FAN19G3207 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.0e-21 107.1 119 48.7
Ciclev10026748m.g Citrus clementina HOM05D006100 ORTHO05D007539 1.4e-21 106.7 141 51.1
FAN28G1903 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.8e-21 106.3 119 47.9
RcHm_v2.0_Chr2g0101751 Rosa chinensis HOM05D006100 ORTHO05D007539 2.3e-21 105.9 131 46.6
Sed0016253 Sechium edule HOM05D006100 ORTHO05D007539 2.3e-21 105.9 132 50.0
Aqoxy6G01099 Aquilegia oxysepala HOM05D006100 ORTHO05D007539 3.0e-21 105.5 128 46.9
Rhsim08G0115500 Rhododendron simsii HOM05D006100 ORTHO05D007539 3.0e-21 105.5 139 51.8
MD02G1148600 Malus domestica HOM05D006100 ORTHO05D007539 8.9e-21 104.0 132 50.8
CiPaw.01G037400 Carya illinoinensis HOM05D006100 ORTHO05D007539 5.7e-20 101.3 110 52.7
Duzib264G0645 Durio zibethinus HOM05D006100 ORTHO05D007539 5.7e-20 101.3 90 61.1
FAN19G2702 Fragaria x ananassa HOM05D006100 ORTHO05D007539 7.5e-20 100.9 131 48.1
CiPaw.02G017200 Carya illinoinensis HOM05D006100 ORTHO05D007539 9.8e-20 100.5 92 63.0
Nitab4.5_0003233g0010 Nicotiana tabacum HOM05D006100 ORTHO05D007539 9.8e-20 100.5 136 47.1
AL8G44670 Arabidopsis lyrata HOM05D006100 ORTHO05D007539 1.3e-19 100.1 126 49.2
Cfa004303 Carpinus fangiana HOM05D006100 ORTHO05D007539 1.7e-19 99.8 135 48.1
FvH4_1g13380 Fragaria vesca HOM05D006100 ORTHO05D007539 2.9e-19 99.0 131 48.1
FAN26G0501 Fragaria x ananassa HOM05D006100 ORTHO05D007539 2.9e-19 99.0 127 47.2
Gohir.A10G094900 Gossypium hirsutum HOM05D006100 ORTHO05D007539 4.9e-19 98.2 131 47.3
RcHm_v2.0_Chr2g0101741 Rosa chinensis HOM05D006100 ORTHO05D007539 6.4e-19 97.8 131 45.0
MD02G1148700 Malus domestica HOM05D006100 ORTHO05D007539 8.3e-19 97.4 135 45.9
CSS0029658 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 1.4e-18 96.7 113 58.4
Lj2g0016254 Lotus japonicus HOM05D006100 ORTHO05D007539 1.8e-18 96.3 132 48.5
AT5G66780 Arabidopsis thaliana HOM05D006100 ORTHO05D007539 3.2e-18 95.5 126 47.6
FAN23G1739 Fragaria x ananassa HOM05D006100 ORTHO05D007539 3.2e-18 95.5 134 47.0
VMungo1215G0978 Vigna mungo HOM05D006100 ORTHO05D007539 3.2e-18 95.5 133 45.9
Carub.0008s2773 Capsella rubella HOM05D006100 ORTHO05D007539 5.4e-18 94.7 95 56.8
Eucgr.I02450 Eucalyptus grandis HOM05D006100 ORTHO05D007539 5.4e-18 94.7 87 64.4
FAN23G0264 Fragaria x ananassa HOM05D006100 ORTHO05D007539 5.4e-18 94.7 86 59.3
MD15G1262800 Malus domestica HOM05D006100 ORTHO05D007539 5.4e-18 94.7 71 69.0
Lsat_1_v5_gn_4_148381 Lactuca sativa HOM05D006100 ORTHO05D007539 7.0e-18 94.4 96 56.2
Lalb_Chr09g0322441 Lupinus albus HOM05D006100 ORTHO05D007539 1.2e-17 93.6 91 58.2
BcaB07g29655 Brassica carinata HOM05D006100 ORTHO05D007539 2.7e-17 92.4 124 46.8
Phvul.002G029900 Phaseolus vulgaris HOM05D006100 ORTHO05D007539 2.7e-17 92.4 132 45.5
arahy.Tifrunner.gnm1.ann1.L1JEHI Arachis hypogaea HOM05D006100 ORTHO05D007539 3.5e-17 92.0 91 56.0
Sp2g29900 Schrenkiella parvula HOM05D006100 ORTHO05D007539 3.5e-17 92.0 125 45.6
PSO675G2321 Papaver somniferum HOM05D006100 ORTHO05D007539 4.6e-17 91.7 149 47.7
ClCG01G019510 Citrullus lanatus HOM05D006100 ORTHO05D007539 7.8e-17 90.9 135 45.9
CARHR280920 Cardamine hirsuta HOM05D006100 ORTHO05D007539 1.0e-16 90.5 124 46.8
FAN26G1330 Fragaria x ananassa HOM05D006100 ORTHO05D007539 3.0e-16 89.0 66 66.7
Solyc02g062770.2 Solanum lycopersicum HOM05D006100 ORTHO05D007539 3.0e-16 89.0 134 44.8
HanXRQChr11g0324821 Helianthus annuus HOM05D006100 ORTHO05D007539 3.9e-16 88.6 102 50.0
BolC7t43033H Brassica oleracea HOM05D006100 ORTHO05D007539 5.0e-16 88.2 124 46.0
PSO541G1538 Papaver somniferum HOM05D006100 ORTHO05D007539 5.0e-16 88.2 151 45.7
arahy.Tifrunner.gnm1.ann1.IKK69W Arachis hypogaea HOM05D006100 ORTHO05D007539 6.6e-16 87.8 94 56.4
BcaC06g34744 Brassica carinata HOM05D006100 ORTHO05D007539 6.6e-16 87.8 124 46.0
C07p25000 Brassica napus HOM05D006100 ORTHO05D007539 6.6e-16 87.8 124 46.0
Glyma.11G067900 Glycine max HOM05D006100 ORTHO05D007539 8.6e-16 87.4 128 47.7
Psat2g159960 Pisum sativum HOM05D006100 ORTHO05D007539 8.6e-16 87.4 95 54.7
Medtr5g020060 Medicago truncatula HOM05D006100 ORTHO05D007539 1.1e-15 87.0 134 41.8
Nitab4.5_0000136g0440 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.5e-15 86.7 166 38.6
Peaxi162Scf00515g00519 Petunia axillaris HOM05D006100 ORTHO05D007539 1.5e-15 86.7 131 45.0
Sopen02g013800 Solanum pennellii HOM05D006100 ORTHO05D007539 1.5e-15 86.7 132 44.7
ECA232G0790 Erigeron canadensis HOM05D006100 ORTHO05D007539 1.9e-15 86.3 114 48.2
vmacro17841 Vaccinium macrocarpon HOM05D006100 ORTHO05D007539 1.9e-15 86.3 114 50.9
Oeu009416.1 Olea europaea HOM05D006100 ORTHO05D007539 3.3e-15 85.5 139 43.9
PGR102G3048 Punica granatum HOM05D006100 ORTHO05D007539 5.6e-15 84.7 89 51.7
PGR119G0418 Punica granatum HOM05D006100 ORTHO05D007539 5.6e-15 84.7 89 57.3
CsaV3_6G046200 Cucumis sativus L. HOM05D006100 ORTHO05D007539 9.5e-15 84.0 135 44.4
BcaB02g09991 Brassica carinata HOM05D006100 ORTHO05D007539 1.6e-14 83.2 130 43.8
Thhalv10005154m.g Eutrema salsugineum HOM05D006100 ORTHO05D007539 1.6e-14 83.2 126 45.2
BcaC03g18400 Brassica carinata HOM05D006100 ORTHO05D007539 2.8e-14 82.4 71 60.6
Gohir.D10G093000 Gossypium hirsutum HOM05D006100 ORTHO05D007539 2.8e-14 82.4 131 42.7
MSTRG.2759 Avicennia marina HOM05D006100 ORTHO05D007539 4.7e-14 81.6 136 41.9
Oeu041448.1 Olea europaea HOM05D006100 ORTHO05D007539 6.2e-14 81.3 139 42.4
A07p17150 Brassica napus HOM05D006100 ORTHO05D007539 8.0e-14 80.9 127 46.5
BraA07t29442Z Brassica rapa HOM05D006100 ORTHO05D007539 8.0e-14 80.9 127 46.5
CAN.G358.97 Capsicum annuum HOM05D006100 ORTHO05D007539 1.1e-13 80.5 136 44.9
Nitab4.5_0000434g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.1e-13 80.5 132 47.7
Aa31LG1G15340 Aethionema arabicum HOM05D006100 ORTHO05D007539 1.4e-13 80.1 71 62.0
C02p64790 Brassica napus HOM05D006100 ORTHO05D007539 1.8e-13 79.7 65 63.1
BolC2t12540H Brassica oleracea HOM05D006100 ORTHO05D007539 1.8e-13 79.7 65 63.1
A02p44400 Brassica napus HOM05D006100 ORTHO05D007539 2.3e-13 79.3 94 52.1
BraA02t09357Z Brassica rapa HOM05D006100 ORTHO05D007539 2.3e-13 79.3 94 52.1
TAR376G0804 Trochodendron aralioides HOM05D001794 ORTHO05D004177 3.1e-13 79.0 110 45.5
FAN28G0382 Fragaria x ananassa HOM05D006100 ORTHO05D007539 4.0e-13 78.6 62 62.9
Nitab4.5_0001385g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 4.0e-13 78.6 133 46.6
Peaxi162Scf00008g03716 Petunia axillaris HOM05D006100 ORTHO05D007539 4.0e-13 78.6 124 39.5
Nn5g29589 Nelumbo nucifera HOM05D006100 ORTHO05D007539 6.8e-13 77.8 131 41.2
CANSAT01G1084 Cannabis sativa HOM05D006100 ORTHO05D007539 8.9e-13 77.4 108 49.1
Glyma.16G140500 Glycine max HOM05D006100 ORTHO05D007539 1.5e-12 76.6 123 43.9
GSVIVG01018974001 Vitis vinifera HOM05D006100 ORTHO05D007539 4.4e-12 75.1 127 43.3
Os03g0723400 Oryza sativa ssp. japonica HOM05D006100 ORTHO05D007539 1.7e-11 73.2 73 53.4
Cpa.g.sc6.110 Carica papaya HOM05D006100 ORTHO05D007539 2.9e-11 72.4 134 41.8
PGSC0003DMG400015478 Solanum tuberosum HOM05D006100 ORTHO05D007539 4.9e-11 71.6 130 43.1
Prupe.7G153800 Prunus persica HOM05D006100 ORTHO05D007539 1.1e-10 70.5 140 40.7
Migut.H00995 Erythranthe guttata HOM05D006100 ORTHO05D007539 3.2e-10 68.9 131 41.2
MELO3C007824.2 Cucumis melo HOM05D006100 ORTHO05D007539 7.0e-10 67.8 89 44.9
Lj4g0020328 Lotus japonicus HOM05D006100 ORTHO05D007539 9.2e-10 67.4 122 42.6
TPR.G34229 Trifolium pratense HOM05D006100 ORTHO05D007539 3.5e-09 65.5 109 42.2
Manes.01G135000 Manihot esculenta HOM05D006100 ORTHO05D007539 7.8e-09 64.3 101 43.6
SGA_v2.0_scaffold276G46633 Striga asiatica HOM05D006100 ORTHO05D007539 7.8e-09 64.3 150 42.0
DCAR_025920 Daucus carota HOM05D006100 ORTHO05D007539 2.3e-08 62.8 63 58.7
Sopen02g030020 Solanum pennellii HOM05D006100 ORTHO05D007539 2.3e-08 62.8 125 41.6
HanXRQChr16g0530351 Helianthus annuus HOM05D006100 ORTHO05D007539 2.5e-07 59.3 93 40.9
AUR62007561 Chenopodium quinoa HOM05D006100 ORTHO05D007539 1.2e-06 57.0 141 38.3
Gorai.011G102200 Gossypium raimondii HOM05D006100 ORTHO05D007539 2.1e-06 56.2 99 39.4
unitig_899.g14492 Utricularia gibba HOM05D006100 ORTHO05D007539 2.1e-06 56.2 104 42.3
AUR62004046 Chenopodium quinoa HOM05D006100 ORTHO05D007539 3.6e-06 55.5 137 38.0
MBI16_g38642_MAGBIO Magnolia biondii HOM05D006100 ORTHO05D007539 3.6e-06 55.5 86 45.3
unitig_21.g20955 Utricularia gibba HOM05D003234 ORTHO05D003635 3.6e-06 55.5 91 41.8
Oeu033643.1 Olea europaea HOM05D006100 ORTHO05D007539 8.1e-06 54.3 57 52.6


User provided reference genes

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