Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018566 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 5.7e-40 167.2 86 100.0
CSS0017994 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 2.5e-35 151.8 90 91.1
Cfa005113 Carpinus fangiana HOM05D007135 ORTHO05D008880 2.6e-29 131.7 86 81.4
TWI75G0424 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 7.7e-29 130.2 90 80.0
Thecc.02G074900 Theobroma cacao HOM05D007135 ORTHO05D008880 1.3e-28 129.4 87 77.0
Potri.009G124700 Populus trichocarpa HOM05D007135 ORTHO05D008880 2.2e-28 128.6 88 76.1
COL.COLO4_26047 Corchorus olitorius HOM05D007135 ORTHO05D008880 3.8e-28 127.9 88 76.1
Haze_02238 Corylus avellana HOM05D007135 ORTHO05D008880 3.8e-28 127.9 85 80.0
PGR142G3962 Punica granatum HOM05D007135 ORTHO05D008880 1.5e-27 125.9 92 73.9
Duzib132G0527 Durio zibethinus HOM05D007135 ORTHO05D008880 2.5e-27 125.2 87 75.9
Prupe.8G083700 Prunus persica HOM05D007135 ORTHO05D008880 2.5e-27 125.2 98 66.3
Potri.004G163100 Populus trichocarpa HOM05D007135 ORTHO05D008880 4.2e-27 124.4 92 71.7
CANSAT11G0395 Cannabis sativa HOM05D007135 ORTHO05D008880 7.2e-27 123.6 99 66.7
Cpa.g.sc150.16 Carica papaya HOM05D007135 ORTHO05D008880 7.2e-27 123.6 85 75.3
MELO3C013419.2 Cucumis melo HOM05D007135 ORTHO05D008880 7.2e-27 123.6 89 74.2
FAN27G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 7.2e-27 123.6 89 71.9
RcHm_v2.0_Chr6g0267951 Rosa chinensis HOM05D007135 ORTHO05D008880 7.2e-27 123.6 93 68.8
MD10G1062900 Malus domestica HOM05D007135 ORTHO05D008880 1.2e-26 122.9 98 66.3
QL11p046458 Quercus lobata HOM05D007135 ORTHO05D008880 1.2e-26 122.9 92 71.7
Duzib248G1605 Durio zibethinus HOM05D007135 ORTHO05D008880 1.6e-26 122.5 87 75.9
FAN15G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 1.6e-26 122.5 89 70.8
Solyc01g110400.2 Solanum lycopersicum HOM05D007135 ORTHO05D008880 1.6e-26 122.5 89 75.3
Sopen01g052550 Solanum pennellii HOM05D007135 ORTHO05D008880 1.6e-26 122.5 89 75.3
DCAR_003685 Daucus carota HOM05D007135 ORTHO05D008880 2.7e-26 121.7 94 73.4
Manes.04G083200 Manihot esculenta HOM05D007135 ORTHO05D008880 2.7e-26 121.7 85 75.3
FvH4_2g10470 Fragaria vesca HOM05D007135 ORTHO05D008880 3.6e-26 121.3 89 70.8
FAN24G2677 Fragaria x ananassa HOM05D007135 ORTHO05D008880 3.6e-26 121.3 89 70.8
SalBow6G3736 Salvia bowleyana HOM05D007135 ORTHO05D008880 4.7e-26 120.9 90 72.2
Migut.B00173 Erythranthe guttata HOM05D007135 ORTHO05D008880 6.1e-26 120.6 91 69.2
Manes.11G081700 Manihot esculenta HOM05D007135 ORTHO05D008880 6.1e-26 120.6 86 72.1
Aqoxy2G03368 Aquilegia oxysepala HOM05D007135 ORTHO05D008880 8.0e-26 120.2 88 68.2
Nn5g29239 Nelumbo nucifera HOM05D007135 ORTHO05D008880 8.0e-26 120.2 86 72.1
Sed0017056 Sechium edule HOM05D007135 ORTHO05D008880 1.8e-25 119.0 85 74.1
Gorai.005G250000 Gossypium raimondii HOM05D007135 ORTHO05D008880 2.3e-25 118.6 90 73.3
Ciclev10029699m.g Citrus clementina HOM05D007135 ORTHO05D008880 3.0e-25 118.2 84 73.8
Gohir.D02G222000 Gossypium hirsutum HOM05D007135 ORTHO05D008880 4.0e-25 117.9 90 71.1
Gorai.002G149200 Gossypium raimondii HOM05D007135 ORTHO05D008880 4.0e-25 117.9 90 71.1
Atru.chr5.3145 Acer truncatum HOM05D007135 ORTHO05D008880 8.8e-25 116.7 89 69.7
Thhalv10000391m.g Eutrema salsugineum HOM05D007135 ORTHO05D008880 1.2e-24 116.3 96 67.7
AL4G10430 Arabidopsis lyrata HOM05D007135 ORTHO05D008880 1.5e-24 115.9 93 68.8
CARHR112160 Cardamine hirsuta HOM05D007135 ORTHO05D008880 1.5e-24 115.9 96 67.7
Gohir.A03G200700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 2.0e-24 115.5 90 71.1
Rhsim05G0068200 Rhododendron simsii HOM05D007135 ORTHO05D008880 2.0e-24 115.5 77 81.8
ClCG02G004560 Citrullus lanatus HOM05D007135 ORTHO05D008880 2.6e-24 115.2 89 69.7
AT2G21290 Arabidopsis thaliana HOM05D007135 ORTHO05D008880 3.3e-24 114.8 96 66.7
MBI05_g16268_MAGBIO Magnolia biondii HOM05D007135 ORTHO05D008880 4.4e-24 114.4 86 69.8
CAN.G170.101 Capsicum annuum HOM05D007135 ORTHO05D008880 5.7e-24 114.0 84 71.4
Aa31LG7G15200 Aethionema arabicum HOM05D007135 ORTHO05D008880 7.5e-24 113.6 91 68.1
Sp4g00480 Schrenkiella parvula HOM05D007135 ORTHO05D008880 9.7e-24 113.2 96 65.6
Carub.0004s0033 Capsella rubella HOM05D007135 ORTHO05D008880 1.3e-23 112.8 96 66.7
Cc02_g16900 Coffea canephora HOM05D007135 ORTHO05D008880 1.3e-23 112.8 97 63.9
Gohir.A13G090900 Gossypium hirsutum HOM05D007135 ORTHO05D008880 1.3e-23 112.8 89 68.5
PSO541G1924 Papaver somniferum HOM05D007135 ORTHO05D008880 1.7e-23 112.5 85 68.2
unitig_60.g25867 Utricularia gibba HOM05D007135 ORTHO05D008880 2.2e-23 112.1 61 86.9
BcaC02g08801 Brassica carinata HOM05D007135 ORTHO05D008880 2.8e-23 111.7 91 65.9
BolC4t26651H Brassica oleracea HOM05D007135 ORTHO05D008880 2.8e-23 111.7 91 65.9
BcaB08g34980 Brassica carinata HOM05D007135 ORTHO05D008880 3.7e-23 111.3 85 70.6
Lalb_Chr23g0265121 Lupinus albus HOM05D007135 ORTHO05D008880 3.7e-23 111.3 85 69.4
Lalb_Chr23g0265141 Lupinus albus HOM05D007135 ORTHO05D008880 3.7e-23 111.3 85 69.4
Psat5g003840 Pisum sativum HOM05D007135 ORTHO05D008880 3.7e-23 111.3 84 71.4
MD05G1055600 Malus domestica HOM05D007135 ORTHO05D008880 4.8e-23 110.9 98 61.2
PSO675G0190 Papaver somniferum HOM05D007135 ORTHO05D008880 4.8e-23 110.9 83 69.9
Phvul.009G002700 Phaseolus vulgaris HOM05D007135 ORTHO05D008880 4.8e-23 110.9 85 70.6
Gohir.D13G096700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 8.3e-23 110.2 85 68.2
C04p50530 Brassica napus HOM05D007135 ORTHO05D008880 1.1e-22 109.8 91 64.8
Ca_15331_v3 Cicer arietinum L. HOM05D007135 ORTHO05D008880 1.1e-22 109.8 85 68.2
ATR0149G014 Amborella trichopoda HOM05D007135 ORTHO05D008880 1.4e-22 109.4 81 67.9
Medtr3g117570 Medicago truncatula HOM05D007135 ORTHO05D008880 1.4e-22 109.4 85 67.1
A09p58330 Brassica napus HOM05D007135 ORTHO05D008880 1.8e-22 109.0 88 65.9
Lj1g0005652 Lotus japonicus HOM05D007135 ORTHO05D008880 3.1e-22 108.2 84 71.4
C08p41660 Brassica napus HOM05D007135 ORTHO05D008880 5.3e-22 107.5 91 62.6
TPR.G32169 Trifolium pratense HOM05D007135 ORTHO05D008880 5.3e-22 107.5 84 67.9
EL10Ac9g21635 Beta vulgaris HOM05D007135 ORTHO05D008880 7.0e-22 107.1 92 60.9
BolC8t51729H Brassica oleracea HOM05D007135 ORTHO05D008880 7.0e-22 107.1 88 67.0
Dinv26818 Davidia involucrata HOM05D000193 ORTHO05D000402 9.1e-22 106.7 76 77.6
TWI79G1445 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 1.2e-21 106.3 77 77.9
BraA09t41224Z Brassica rapa HOM05D007135 ORTHO05D008880 1.6e-21 105.9 88 65.9
AUR62010386 Chenopodium quinoa HOM05D007135 ORTHO05D008880 1.6e-21 105.9 92 57.6
AUR62016832 Chenopodium quinoa HOM05D007135 ORTHO05D008880 1.6e-21 105.9 92 57.6
Os09g0528100 Oryza sativa ssp. japonica HOM05D007135 ORTHO05D008880 3.5e-21 104.8 60 83.3
Sc08g0000910 Simmondsia chinensis HOM05D007135 ORTHO05D008880 3.5e-21 104.8 95 58.9
A04p16070 Brassica napus HOM05D007135 ORTHO05D008880 4.5e-21 104.4 93 62.4
BraA04t17247Z Brassica rapa HOM05D007135 ORTHO05D008880 4.5e-21 104.4 93 62.4
vmacro17421 Vaccinium macrocarpon HOM05D007135 ORTHO05D008880 1.3e-20 102.8 75 73.3
Actinidia02247 Actinidia chinensis HOM05D007135 ORTHO05D008880 1.7e-20 102.4 99 59.6
SHI05613 Sapria himalayana HOM05D007135 ORTHO05D008880 2.2e-20 102.1 64 75.0
GSVIVG01024170001 Vitis vinifera HOM05D007135 ORTHO05D008880 2.2e-20 102.1 72 75.0
TAR381G0296 Trochodendron aralioides HOM05D007135 ORTHO05D008880 2.9e-20 101.7 75 73.3
CiPaw.05G073400 Carya illinoinensis HOM05D007135 ORTHO05D008880 6.5e-20 100.5 72 75.0
Ah.01g018800 Amaranthus hybridus HOM05D007135 ORTHO05D008880 8.5e-20 100.1 88 60.2
BcaC07g41158 Brassica carinata HOM05D007135 ORTHO05D008880 1.1e-19 99.8 92 62.0
ECA234G2991 Erigeron canadensis HOM05D007135 ORTHO05D008880 1.1e-19 99.8 79 69.6
Nitab4.5_0005932g0010 Nicotiana tabacum HOM05D007135 ORTHO05D008880 1.1e-19 99.8 78 71.8
Nitab4.5_0005266g0060 Nicotiana tabacum HOM05D007135 ORTHO05D008880 1.9e-19 99.0 85 67.1
Sabra09G0095700 Salix brachista HOM05D007135 ORTHO05D008880 2.7e-18 95.1 73 68.5
Sabra04G0109400 Salix brachista HOM05D007135 ORTHO05D008880 2.3e-17 92.0 77 64.9
Peaxi162Scf00016g00015 Petunia axillaris HOM05D007135 ORTHO05D008880 7.5e-16 87.0 60 76.7
CsaV3_7G000400 Cucumis sativus L. HOM05D007135 ORTHO05D008880 9.8e-16 86.7 74 66.2
Glyma.04G007900 Glycine max HOM05D007135 ORTHO05D008880 1.3e-15 86.3 75 62.7
HanXRQChr10g0294181 Helianthus annuus HOM05D007135 ORTHO05D008880 1.7e-15 85.9 76 61.8
THA.LOC104824791 Tarenaya hassleriana HOM05D007135 ORTHO05D008880 2.2e-15 85.5 81 61.7
Glyma.06G007700 Glycine max HOM05D007135 ORTHO05D008880 3.7e-15 84.7 72 65.3
Lsat_1_v5_gn_4_67341 Lactuca sativa HOM05D007135 ORTHO05D008880 4.8e-15 84.3 80 60.0
Duzib052G0169 Durio zibethinus HOM05D007135 ORTHO05D008880 8.3e-15 83.6 71 67.6
Haze_15927 Corylus avellana HOM05D018783 ORTHO05D008880 3.1e-14 81.6 51 82.4
FAN20G0703 Fragaria x ananassa HOM05D007135 ORTHO05D008880 4.1e-14 81.3 52 75.0
Haze_08383 Corylus avellana HOM05D007135 ORTHO05D008880 5.4e-14 80.9 50 86.0
HPP92_008881 Vanilla planifolia HOM05D007135 ORTHO05D008880 1.0e-12 76.6 41 82.9
Zm00001eb103340 Zea mays HOM05D007135 ORTHO05D008880 1.9e-11 72.4 52 65.4
RhsimUnG0003900 Rhododendron simsii HOM05D004431 ORTHO05D005053 1.5e-08 62.8 43 79.1
RhsimUnG0067300 Rhododendron simsii HOM05D004431 ORTHO05D005053 1.5e-08 62.8 43 79.1
Sopen05g031230 Solanum pennellii HOM05D007113 ORTHO05D008859 5.4e-06 54.3 78 42.3
Mapoly0090s0033 Marchantia polymorpha HOM05D007135 ORTHO05D008880 7.0e-06 53.9 73 42.5
Solyc05g052710.3 Solanum lycopersicum HOM05D007113 ORTHO05D008859 9.2e-06 53.5 78 41.0


User provided reference genes

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