Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018543 Camellia sinensis var. sinensis HOM05D004192 ORTHO05D004917 0.0e+00 1518.1 750 100.0
CSS0020257 Camellia sinensis var. sinensis HOM05D004192 ORTHO05D004917 0.0e+00 1458.7 731 98.9
Dinv31284 Davidia involucrata HOM05D004192 ORTHO05D004917 0.0e+00 1246.9 731 84.8
Rhsim03G0109700 Rhododendron simsii HOM05D004192 ORTHO05D004917 0.0e+00 1189.1 797 76.7
CANSAT56G0904 Cannabis sativa HOM05D004192 ORTHO05D004917 0.0e+00 1170.2 726 79.5
TWI38G0502 Tripterygium wilfordii HOM05D004192 ORTHO05D004917 0.0e+00 1169.5 731 79.9
Thecc.10G097700 Theobroma cacao HOM05D004192 ORTHO05D004917 0.0e+00 1166.8 731 78.8
FAN10G1549 Fragaria x ananassa HOM05D004192 ORTHO05D004917 0.0e+00 1160.6 731 79.1
Cc02_g10300 Coffea canephora HOM05D004192 ORTHO05D004917 0.0e+00 1156.4 731 77.7
FvH4_7g06400 Fragaria vesca HOM05D004192 ORTHO05D004917 0.0e+00 1156.4 731 78.8
PGR044G0968 Punica granatum HOM05D004192 ORTHO05D004917 0.0e+00 1152.5 734 78.2
COL.COLO4_34171 Corchorus olitorius HOM05D004192 ORTHO05D004917 0.0e+00 1152.1 734 77.7
Manes.10G054700 Manihot esculenta HOM05D004192 ORTHO05D004917 0.0e+00 1151.7 731 78.8
Eucgr.J01026 Eucalyptus grandis HOM05D004192 ORTHO05D004917 0.0e+00 1151.0 727 78.3
Duzib114G0707 Durio zibethinus HOM05D004192 ORTHO05D004917 0.0e+00 1145.6 732 78.4
Prupe.2G090700 Prunus persica HOM05D004192 ORTHO05D004917 0.0e+00 1145.6 731 78.2
FAN06G5118 Fragaria x ananassa HOM05D004192 ORTHO05D004917 0.0e+00 1143.6 759 76.0
FAN01G1656 Fragaria x ananassa HOM05D004192 ORTHO05D004917 0.0e+00 1143.3 731 78.0
Gorai.008G097500 Gossypium raimondii HOM05D004192 ORTHO05D004917 0.0e+00 1133.2 727 76.2
ClCG08G008030 Citrullus lanatus HOM05D004192 ORTHO05D004917 0.0e+00 1130.2 733 76.4
Gohir.A12G088900 Gossypium hirsutum HOM05D004192 ORTHO05D004917 0.0e+00 1130.2 727 76.2
CiPaw.13G035500 Carya illinoinensis HOM05D004192 ORTHO05D004917 0.0e+00 1127.9 727 76.8
Nn6g35085 Nelumbo nucifera HOM05D004192 ORTHO05D004917 0.0e+00 1127.1 731 77.0
Gohir.D12G087300 Gossypium hirsutum HOM05D004192 ORTHO05D004917 0.0e+00 1125.9 727 75.8
RcHm_v2.0_Chr1g0334491 Rosa chinensis HOM05D004192 ORTHO05D004917 0.0e+00 1119.4 731 76.5
CsaV3_2G032910 Cucumis sativus L. HOM05D004192 ORTHO05D004917 0.0e+00 1119.0 736 75.4
MELO3C019875.2 Cucumis melo HOM05D004192 ORTHO05D004917 0.0e+00 1116.7 736 75.8
Atru.chr12.952 Acer truncatum HOM05D004192 ORTHO05D004917 0.0e+00 1116.3 706 78.9
Potri.010G233600 Populus trichocarpa HOM05D004192 ORTHO05D004917 0.0e+00 1115.5 727 75.9
Hund22302 Selenicereus undatus HOM05D004192 ORTHO05D004917 0.0e+00 1115.5 727 76.2
TAR623G0905 Trochodendron aralioides HOM05D004192 ORTHO05D004917 0.0e+00 1115.1 732 76.0
MSTRG.8112 Avicennia marina HOM05D004192 ORTHO05D004917 0.0e+00 1114.8 727 76.5
CAN.G135.58 Capsicum annuum HOM05D004192 ORTHO05D004917 0.0e+00 1114.8 727 75.9
DCAR_019044 Daucus carota HOM05D004192 ORTHO05D004917 0.0e+00 1114.4 727 77.3
MD07G1072600 Malus domestica HOM05D004192 ORTHO05D004917 0.0e+00 1113.2 731 76.7
Sed0024945 Sechium edule HOM05D004192 ORTHO05D004917 0.0e+00 1112.8 733 75.4
Peaxi162Scf00398g00058 Petunia axillaris HOM05D004192 ORTHO05D004917 0.0e+00 1110.9 744 75.5
Duzib128G0631 Durio zibethinus HOM05D004192 ORTHO05D004917 0.0e+00 1110.5 731 76.2
ECA233G2766 Erigeron canadensis HOM05D004192 ORTHO05D004917 0.0e+00 1110.5 733 74.9
FAN03G2327 Fragaria x ananassa HOM05D004192 ORTHO05D004917 0.0e+00 1105.9 731 76.1
Nn2g13965 Nelumbo nucifera HOM05D004192 ORTHO05D004917 0.0e+00 1104.7 731 75.0
MD02G1244600 Malus domestica HOM05D004192 ORTHO05D004917 0.0e+00 1104.4 733 75.7
Lsat_1_v5_gn_8_23081 Lactuca sativa HOM05D004192 ORTHO05D004917 0.0e+00 1102.8 734 74.4
Lj2C27G6 Lonicera japonica HOM05D004192 ORTHO05D004917 0.0e+00 1100.9 801 71.5
Sc20g0001360 Simmondsia chinensis HOM05D004192 ORTHO05D004917 0.0e+00 1100.5 728 75.5
Lj3A933G36 Lonicera japonica HOM05D004192 ORTHO05D004917 0.0e+00 1099.7 735 75.6
PSO339G1524 Papaver somniferum HOM05D004192 ORTHO05D004917 0.0e+00 1099.3 729 74.6
Migut.F01661 Erythranthe guttata HOM05D004192 ORTHO05D004917 0.0e+00 1099.0 727 74.8
PSO384G3766 Papaver somniferum HOM05D004192 ORTHO05D004917 0.0e+00 1098.6 729 74.6
EL10Ac4g08605 Beta vulgaris HOM05D004192 ORTHO05D004917 0.0e+00 1097.4 728 74.3
Potri.008G026900 Populus trichocarpa HOM05D004192 ORTHO05D004917 0.0e+00 1097.0 722 75.2
Gohir.D01G118800 Gossypium hirsutum HOM05D004192 ORTHO05D004917 0.0e+00 1095.1 732 75.1
Gohir.A01G129200 Gossypium hirsutum HOM05D004192 ORTHO05D004917 0.0e+00 1094.7 732 75.1
Gorai.002G144900 Gossypium raimondii HOM05D004192 ORTHO05D004917 0.0e+00 1093.2 732 75.0
HanXRQChr08g0218151 Helianthus annuus HOM05D004192 ORTHO05D004917 0.0e+00 1091.3 732 73.5
Phvul.007G105800 Phaseolus vulgaris HOM05D004192 ORTHO05D004917 0.0e+00 1091.3 731 73.9
Sed0026233 Sechium edule HOM05D004192 ORTHO05D004917 0.0e+00 1086.2 746 73.3
Sabra08G0018400 Salix brachista HOM05D004192 ORTHO05D004917 0.0e+00 1085.9 722 74.8
Sopen11g003530 Solanum pennellii HOM05D004192 ORTHO05D004917 0.0e+00 1085.9 727 73.7
Solyc11g007670.3 Solanum lycopersicum HOM05D004192 ORTHO05D004917 0.0e+00 1082.4 727 73.6
Aqoxy1G00968 Aquilegia oxysepala HOM05D004192 ORTHO05D004917 0.0e+00 1080.5 728 73.9
Lalb_Chr02g0151281 Lupinus albus HOM05D004192 ORTHO05D004917 0.0e+00 1080.5 731 73.5
Glyma.10G201300 Glycine max HOM05D004192 ORTHO05D004917 0.0e+00 1078.5 734 72.8
HanXRQChr12g0368431 Helianthus annuus HOM05D004192 ORTHO05D004917 0.0e+00 1077.4 736 73.4
THA.LOC104816452 Tarenaya hassleriana HOM05D004192 ORTHO05D004917 1.0e-311 1073.2 736 73.2
VMungo0720G1942 Vigna mungo HOM05D004192 ORTHO05D004917 1.0e-311 1073.2 732 72.5
SGA_v2.0_scaffold62G21320 Striga asiatica HOM05D004192 ORTHO05D004917 4.6e-311 1070.8 744 71.6
Psat6g175320 Pisum sativum HOM05D004192 ORTHO05D004917 3.3e-309 1064.7 734 72.9
arahy.Tifrunner.gnm1.ann1.CA0PQ2 Arachis hypogaea HOM05D004192 ORTHO05D004917 1.6e-308 1062.4 733 73.9
Ca_10484_v3 Cicer arietinum L. HOM05D004192 ORTHO05D004917 1.4e-304 1049.3 730 72.3
Lj5g0013826 Lotus japonicus HOM05D004192 ORTHO05D004917 7.1e-304 1047.0 733 72.2
AL3G21970 Arabidopsis lyrata HOM05D004192 ORTHO05D004917 2.3e-302 1042.0 731 71.0
Sabra10G0181200 Salix brachista HOM05D004192 ORTHO05D004917 1.1e-301 1039.6 809 66.6
TPR.G2517 Trifolium pratense HOM05D004192 ORTHO05D004917 1.5e-301 1039.3 777 69.1
Thhalv10020062m.g Eutrema salsugineum HOM05D004192 ORTHO05D004917 1.9e-301 1038.9 727 71.4
Carub.0003s0979 Capsella rubella HOM05D004192 ORTHO05D004917 2.5e-301 1038.5 727 70.7
AT3G10550 Arabidopsis thaliana HOM05D004192 ORTHO05D004917 5.6e-301 1037.3 731 70.2
Ah.04g163610 Amaranthus hybridus HOM05D004192 ORTHO05D004917 7.3e-301 1036.9 761 68.6
HanXRQChr14g0456301 Helianthus annuus HOM05D004192 ORTHO05D004917 9.6e-301 1036.6 745 70.6
Sp3g08830 Schrenkiella parvula HOM05D004192 ORTHO05D004917 3.6e-300 1034.6 731 70.6
Lalb_Chr21g0313171 Lupinus albus HOM05D004192 ORTHO05D004917 6.2e-300 1033.9 731 71.4
GSVIVG01034690001 Vitis vinifera HOM05D004192 ORTHO05D004917 8.1e-300 1033.5 634 80.4
Thhalv10012689m.g Eutrema salsugineum HOM05D004192 ORTHO05D004917 2.4e-299 1031.9 732 70.9
THA.LOC104823194 Tarenaya hassleriana HOM05D004192 ORTHO05D004917 3.1e-299 1031.6 733 70.9
Nitab4.5_0000593g0020 Nicotiana tabacum HOM05D004192 ORTHO05D004917 9.0e-299 1030.0 734 71.0
Haze_02630 Corylus avellana HOM05D004192 ORTHO05D004917 2.6e-298 1028.5 786 68.1
CDE06G2538 Ceratophyllum demersum HOM05D004192 ORTHO05D004917 6.4e-297 1023.8 726 71.5
Glyma.20G189100 Glycine max HOM05D004192 ORTHO05D004917 2.4e-296 1021.9 747 69.3
AL6G14190 Arabidopsis lyrata HOM05D004192 ORTHO05D004917 2.1e-295 1018.8 731 69.8
ATR0820G117 Amborella trichopoda HOM05D004192 ORTHO05D004917 7.9e-295 1016.9 730 69.9
BcaB04g21235 Brassica carinata HOM05D004192 ORTHO05D004917 3.9e-294 1014.6 724 70.4
AT5G04540 Arabidopsis thaliana HOM05D004192 ORTHO05D004917 3.1e-291 1005.0 731 68.4
Aa31LG3G3400 Aethionema arabicum HOM05D004192 ORTHO05D004917 1.2e-290 1003.0 737 68.5
BcaNung05805 Brassica carinata HOM05D004192 ORTHO05D004917 1.5e-290 1002.7 731 68.9
BolC1t05384H Brassica oleracea HOM05D004192 ORTHO05D004917 1.5e-290 1002.7 731 68.9
BolC9t59967H Brassica oleracea HOM05D004192 ORTHO05D004917 6.4e-289 997.3 732 68.6
Sp6g38220 Schrenkiella parvula HOM05D004192 ORTHO05D004917 1.1e-288 996.5 732 68.7
Carub.0006s0348 Capsella rubella HOM05D004192 ORTHO05D004917 3.2e-288 995.0 731 68.7
PGSC0003DMG402027320 Solanum tuberosum HOM05D004192 ORTHO05D004917 6.0e-287 990.7 742 67.7
A10p31560 Brassica napus HOM05D004192 ORTHO05D004917 1.8e-286 989.2 733 67.9
BraA10t45202Z Brassica rapa HOM05D004192 ORTHO05D004917 1.8e-286 989.2 733 67.9
C02p01980 Brassica napus HOM05D004192 ORTHO05D004917 8.7e-286 986.9 733 68.2
BolC2t06155H Brassica oleracea HOM05D004192 ORTHO05D004917 1.6e-284 982.6 733 68.5
BraA02t04817Z Brassica rapa HOM05D004192 ORTHO05D004917 2.1e-284 982.2 733 68.3
BraA01t04242Z Brassica rapa HOM05D004192 ORTHO05D004917 1.7e-281 972.6 704 69.3
HPP92_001744 Vanilla planifolia HOM05D004192 ORTHO05D004917 5.1e-278 961.1 727 67.3
ECA238G3394 Erigeron canadensis HOM05D004192 ORTHO05D004917 1.0e-270 936.8 732 65.0
C09p72230 Brassica napus HOM05D004192 ORTHO05D004917 4.1e-267 924.9 673 69.4
AUR62041537 Chenopodium quinoa HOM05D004192 ORTHO05D004917 5.9e-266 921.0 604 75.5
BcaC06g32164 Brassica carinata HOM05D004192 ORTHO05D004917 4.2e-264 914.8 632 71.5
AUR62041535 Chenopodium quinoa HOM05D004192 ORTHO05D004917 4.2e-264 914.8 603 75.1
Aa31LG11G5410 Aethionema arabicum HOM05D004192 ORTHO05D004917 2.2e-257 892.5 730 64.0
CiPaw.14G028000 Carya illinoinensis HOM05D004192 ORTHO05D004917 6.7e-254 880.9 532 81.0
SEGI_16113 Sequoiadendron giganteum HOM05D004192 ORTHO05D004917 2.2e-252 875.9 731 61.1
Actinidia18569 Actinidia chinensis HOM05D004192 ORTHO05D004917 1.0e-241 840.5 567 76.0
Lsat_1_v5_gn_2_102840 Lactuca sativa HOM05D004192 ORTHO05D004917 4.4e-229 798.5 718 60.9
Medtr1g492590 Medicago truncatula HOM05D004192 ORTHO05D004917 1.0e-225 787.3 547 72.8
AagrBONN_evm.TU.Sc2ySwM_368.2559 Anthoceros agrestis HOM05D004192 ORTHO05D004917 3.3e-216 755.7 761 53.7
Pp3c22_15020 Physcomitrium patens HOM05D004192 ORTHO05D004917 1.5e-200 703.7 759 49.7
unitig_736.g22321 Utricularia gibba HOM05D004192 ORTHO05D004917 1.5e-200 703.7 731 54.2
Pp3c18_20050 Physcomitrium patens HOM05D004192 ORTHO05D004917 1.4e-198 697.2 762 50.0
Nitab4.5_0003408g0020 Nicotiana tabacum HOM05D004192 ORTHO05D004917 7.8e-194 681.4 761 50.7
Mapoly0087s0031 Marchantia polymorpha HOM05D004192 ORTHO05D004917 6.9e-190 668.3 752 47.6
Hma1.2p1_0492F.1_g164750 Hydrangea macrophylla HOM05D004192 ORTHO05D004917 3.2e-179 632.9 391 81.1
vmacro07217 Vaccinium macrocarpon HOM05D004192 ORTHO05D004917 7.4e-176 621.7 496 67.9
MBI17_g20218_MAGBIO Magnolia biondii HOM05D004192 ORTHO05D004917 2.1e-175 620.2 457 68.3
SHI21315 Sapria himalayana HOM05D004192 ORTHO05D004917 8.4e-172 608.2 470 66.8
CARHR208730 Cardamine hirsuta HOM05D004192 ORTHO05D004917 1.0e-164 584.7 471 63.7
CARHR085080 Cardamine hirsuta HOM05D004192 ORTHO05D004917 1.6e-159 567.4 348 80.2
SMO367G0225 Selaginella moellendorffii HOM05D004192 ORTHO05D004917 6.3e-143 512.3 736 42.8
A01p41680 Brassica napus HOM05D004192 ORTHO05D004917 4.7e-138 496.1 328 76.2
Os08g0556700 Oryza sativa ssp. japonica HOM05D004192 ORTHO05D004917 5.2e-137 492.7 430 61.4
CARHR085070 Cardamine hirsuta HOM05D004192 ORTHO05D004917 3.6e-130 469.9 387 61.2
AL3G45840 Arabidopsis lyrata HOM05D004192 ORTHO05D004917 8.5e-124 448.7 367 65.1
Oeu026557.1 Olea europaea HOM05D004192 ORTHO05D004917 1.1e-115 421.8 579 45.4
Ciclev10031728m.g Citrus clementina HOM05D004192 ORTHO05D004917 2.6e-112 410.6 260 78.1
Zm00001eb039660 Zea mays HOM05D004192 ORTHO05D004917 1.3e-103 381.7 351 58.1
MBI17_g20211_MAGBIO Magnolia biondii HOM05D004192 ORTHO05D004917 1.9e-102 377.9 248 74.6
HanXRQChr14g0456291 Helianthus annuus HOM05D004192 ORTHO05D004917 1.1e-99 368.6 293 63.5
Oeu026556.1 Olea europaea HOM05D004192 ORTHO05D004917 9.2e-94 349.0 250 71.6
Hma1.2p1_0492F.1_g164740 Hydrangea macrophylla HOM05D004192 ORTHO05D004917 2.1e-85 321.2 189 82.5
Cpa.g.sc942.1 Carica papaya HOM05D004192 ORTHO05D004917 3.0e-76 290.8 188 74.5
vmacro07216 Vaccinium macrocarpon HOM05D004192 ORTHO05D004917 1.6e-74 285.0 224 68.3
Medtr1g092570 Medicago truncatula HOM05D004192 ORTHO05D004917 5.3e-73 280.0 194 72.7
arahy.Tifrunner.gnm1.ann1.VIL3TT Arachis hypogaea HOM05D004192 ORTHO05D004917 8.4e-71 272.7 181 75.7
SHI21312 Sapria himalayana HOM05D004192 ORTHO05D004917 5.1e-68 263.5 190 67.4
Psat0s4326g0040 Pisum sativum HOM05D004192 ORTHO05D004917 3.3e-67 260.8 178 72.5
Zm00001eb215930 Zea mays HOM05D004192 ORTHO05D004917 5.6e-67 260.0 186 67.2
Cpa.g.c33984 Carica papaya HOM05D004192 ORTHO05D004917 6.4e-63 246.5 159 80.5
QL04p040652 Quercus lobata HOM05D004192 ORTHO05D004917 7.1e-54 216.5 269 49.4
Psat0s3097g0040 Pisum sativum HOM05D004192 ORTHO05D004917 6.7e-52 209.9 130 80.0
Cfa026029 Carpinus fangiana HOM05D004192 ORTHO05D004917 1.0e-47 196.1 600 29.0
Actinidia18568 Actinidia chinensis HOM05D004192 ORTHO05D004917 3.1e-41 174.5 109 78.9
BcaB02g10205 Brassica carinata HOM05D004192 ORTHO05D004917 1.2e-32 146.0 125 61.6
TAR371G0071 Trochodendron aralioides HOM05D004192 ORTHO05D004917 3.8e-31 141.0 128 60.9
SHI21313 Sapria himalayana HOM05D004192 ORTHO05D004917 6.5e-31 140.2 72 97.2
Oeu021819.1 Olea europaea HOM05D004192 ORTHO05D004917 4.7e-21 107.5 78 74.4
Rhsim01G0150300 Rhododendron simsii HOM05D004192 ORTHO05D004917 4.5e-16 90.9 98 53.1
AL4G18520 Arabidopsis lyrata HOM05D003414 ORTHO05D003913 4.1e-09 67.8 35 82.9
AL4G19510 Arabidopsis lyrata HOM05D002764 ORTHO05D002960 4.1e-09 67.8 35 82.9
AL5G23210 Arabidopsis lyrata HOM05D063572 ORTHO05D002960 4.1e-09 67.8 35 82.9
Oeu032726.1 Olea europaea HOM05D004192 ORTHO05D004917 2.7e-08 65.1 85 55.3
Rhsim01G0135300 Rhododendron simsii HOM05D000781 ORTHO05D000643 2.9e-07 61.6 49 69.4
TAR633G0581 Trochodendron aralioides HOM05D004192 ORTHO05D004917 2.9e-07 61.6 60 53.3
AL6G39020 Arabidopsis lyrata HOM05D003414 ORTHO05D003913 3.2e-06 58.2 35 74.3


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