Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018526 Camellia sinensis var. sinensis HOM05D004959 ORTHO05D005961 2.3e-132 475.7 263 100.0
Actinidia07601 Actinidia chinensis HOM05D004959 ORTHO05D005961 7.4e-91 337.8 235 79.6
vmacro15931 Vaccinium macrocarpon HOM05D004959 ORTHO05D005961 2.8e-90 335.9 235 73.2
Rhsim02G0134800 Rhododendron simsii HOM05D004959 ORTHO05D005961 4.8e-90 335.1 235 72.8
Rhsim01G0101500 Rhododendron simsii HOM05D004959 ORTHO05D005961 7.0e-89 331.3 237 72.2
Dinv06304 Davidia involucrata HOM05D004959 ORTHO05D005961 1.4e-84 317.0 235 68.1
Dinv04263 Davidia involucrata HOM05D004959 ORTHO05D005961 3.0e-84 315.8 235 67.7
Hma1.2p1_0137F.1_g062550 Hydrangea macrophylla HOM05D004959 ORTHO05D005961 3.6e-77 292.4 235 62.1
Cfa000659 Carpinus fangiana HOM05D004959 ORTHO05D005961 3.1e-73 279.3 237 61.2
Sabra18G0102400 Salix brachista HOM05D004959 ORTHO05D005961 6.5e-71 271.6 238 58.0
Potri.018G118800 Populus trichocarpa HOM05D004959 ORTHO05D005961 5.5e-70 268.5 238 58.0
Lsat_1_v5_gn_8_33541 Lactuca sativa HOM05D004959 ORTHO05D005961 3.6e-69 265.8 237 56.1
Cc04_g10880 Coffea canephora HOM05D004959 ORTHO05D005961 1.4e-68 263.8 237 58.6
Manes.16G050600 Manihot esculenta HOM05D004959 ORTHO05D005961 1.8e-68 263.5 238 63.4
QL04p014466 Quercus lobata HOM05D004959 ORTHO05D005961 6.8e-68 261.5 237 57.0
QL04p014830 Quercus lobata HOM05D004959 ORTHO05D005961 6.8e-68 261.5 237 57.0
TWI63G1138 Tripterygium wilfordii HOM05D004959 ORTHO05D005961 4.4e-67 258.8 237 57.8
MBI07_g42017_MAGBIO Magnolia biondii HOM05D004959 ORTHO05D005961 9.8e-67 257.7 235 56.2
Nn3g21093 Nelumbo nucifera HOM05D004959 ORTHO05D005961 1.7e-66 256.9 235 63.8
Aqoxy3G03508 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 1.4e-65 253.8 235 54.0
GSVIVG01032944001 Vitis vinifera HOM05D004959 ORTHO05D005961 1.4e-65 253.8 238 56.3
CiPaw.10G061900 Carya illinoinensis HOM05D004959 ORTHO05D005961 3.1e-65 252.7 237 55.7
EL10Ac2g04300 Beta vulgaris HOM05D004959 ORTHO05D005961 4.1e-65 252.3 235 53.6
Lj3A850G96 Lonicera japonica HOM05D004959 ORTHO05D005961 4.1e-65 252.3 247 55.1
HanXRQChr12g0366411 Helianthus annuus HOM05D004959 ORTHO05D005961 1.6e-64 250.4 238 52.9
Aqoxy7G01840 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 2.0e-64 250.0 235 52.3
Aqoxy5G03195 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 2.7e-64 249.6 235 52.3
PSO017G0156 Papaver somniferum HOM05D004959 ORTHO05D005961 3.5e-64 249.2 235 54.9
Solyc02g064590.2 Solanum lycopersicum HOM05D004959 ORTHO05D005961 3.5e-64 249.2 228 54.4
Solyc02g064620.2 Solanum lycopersicum HOM05D004959 ORTHO05D005961 3.5e-64 249.2 228 54.4
Cpa.g.sc30.122 Carica papaya HOM05D004959 ORTHO05D005961 4.5e-64 248.8 237 57.4
Sopen02g014720 Solanum pennellii HOM05D004959 ORTHO05D005961 5.9e-64 248.4 228 54.4
PGSC0003DMG400003329 Solanum tuberosum HOM05D004959 ORTHO05D005961 1.0e-63 247.7 228 54.4
CAN.G370.71 Capsicum annuum HOM05D004959 ORTHO05D005961 1.3e-63 247.3 238 52.5
Thecc.02G004800 Theobroma cacao HOM05D004959 ORTHO05D005961 6.6e-63 245.0 237 54.0
PSO478G1937 Papaver somniferum HOM05D004959 ORTHO05D005961 9.5e-62 241.1 235 53.2
PGR142G3977 Punica granatum HOM05D004959 ORTHO05D005961 2.1e-61 240.0 241 60.6
ECA233G2209 Erigeron canadensis HOM05D004959 ORTHO05D005961 2.8e-61 239.6 239 50.2
Eucgr.I01567 Eucalyptus grandis HOM05D004959 ORTHO05D005961 2.8e-61 239.6 239 53.1
Nitab4.5_0000036g0080 Nicotiana tabacum HOM05D004959 ORTHO05D005961 2.8e-61 239.6 238 53.8
Prupe.3G104300 Prunus persica HOM05D004959 ORTHO05D005961 4.7e-61 238.8 242 50.4
Sc10g0002790 Simmondsia chinensis HOM05D004959 ORTHO05D005961 1.0e-60 237.7 235 53.2
CsaV3_5G015760 Cucumis sativus L. HOM05D004959 ORTHO05D005961 6.8e-60 235.0 236 52.1
Gohir.D12G047700 Gossypium hirsutum HOM05D004959 ORTHO05D005961 8.9e-60 234.6 237 51.9
DCAR_026905 Daucus carota HOM05D004959 ORTHO05D005961 9.8e-59 231.1 235 52.3
CANSAT25G2352 Cannabis sativa HOM05D004959 ORTHO05D005961 3.7e-58 229.2 237 52.7
LjContig00564g0005645 Lotus japonicus HOM05D004959 ORTHO05D005961 3.7e-58 229.2 237 51.9
ClCG09G011850 Citrullus lanatus HOM05D004959 ORTHO05D005961 8.3e-58 228.0 236 50.4
ATR0037G053 Amborella trichopoda HOM05D004959 ORTHO05D005961 1.1e-57 227.6 235 50.6
RcHm_v2.0_Chr4g0396011 Rosa chinensis HOM05D004959 ORTHO05D005961 1.8e-57 226.9 236 49.6
Sed0018634 Sechium edule HOM05D004959 ORTHO05D005961 1.8e-57 226.9 236 50.4
COL.COLO4_18025 Corchorus olitorius HOM05D004959 ORTHO05D005961 2.4e-57 226.5 237 51.1
Lalb_Chr19g0135221 Lupinus albus HOM05D004959 ORTHO05D005961 4.1e-57 225.7 236 50.4
LjContig00564g0002415 Lotus japonicus HOM05D004959 ORTHO05D005961 5.4e-57 225.3 237 51.5
Medtr4g078330 Medicago truncatula HOM05D004959 ORTHO05D005961 9.2e-57 224.6 276 48.2
MELO3C026444.2 Cucumis melo HOM05D004959 ORTHO05D005961 1.2e-56 224.2 236 50.0
Peaxi162Scf00449g00321 Petunia axillaris HOM05D004959 ORTHO05D005961 1.2e-56 224.2 238 49.6
Gohir.A12G049000 Gossypium hirsutum HOM05D004959 ORTHO05D005961 2.0e-56 223.4 270 46.7
Migut.E00705 Erythranthe guttata HOM05D004959 ORTHO05D005961 2.7e-56 223.0 235 50.6
Glyma.19G032700 Glycine max HOM05D004959 ORTHO05D005961 2.7e-56 223.0 265 49.4
AUR62012329 Chenopodium quinoa HOM05D004959 ORTHO05D005961 3.5e-56 222.6 235 48.1
FAN17G1136 Fragaria x ananassa HOM05D004959 ORTHO05D005961 3.5e-56 222.6 257 47.1
Gorai.008G050400 Gossypium raimondii HOM05D004959 ORTHO05D005961 4.6e-56 222.2 270 47.0
Ca_18944_v3 Cicer arietinum L. HOM05D004959 ORTHO05D005961 7.8e-56 221.5 237 50.2
CDE04G0396 Ceratophyllum demersum HOM05D004959 ORTHO05D005961 1.0e-55 221.1 235 48.1
Psat7g167160 Pisum sativum HOM05D004959 ORTHO05D005961 1.0e-55 221.1 237 50.2
AUR62022971 Chenopodium quinoa HOM05D004959 ORTHO05D005961 1.3e-55 220.7 235 47.2
VMungo0464G0163 Vigna mungo HOM05D004959 ORTHO05D005961 1.3e-55 220.7 265 49.1
FAN22G0965 Fragaria x ananassa HOM05D004959 ORTHO05D005961 3.9e-55 219.2 244 48.0
Phvul.004G026300 Phaseolus vulgaris HOM05D004959 ORTHO05D005961 3.9e-55 219.2 265 49.1
HPP92_024644 Vanilla planifolia HOM05D004959 ORTHO05D005961 8.6e-55 218.0 242 47.5
FAN12G3376 Fragaria x ananassa HOM05D004959 ORTHO05D005961 1.5e-54 217.2 244 47.1
Atru.chr8.667 Acer truncatum HOM05D004959 ORTHO05D005961 1.9e-54 216.9 175 61.7
Lj3g0004583 Lotus japonicus HOM05D004959 ORTHO05D005961 1.9e-54 216.9 237 57.8
Migut.E00612 Erythranthe guttata HOM05D004959 ORTHO05D005961 2.5e-54 216.5 235 54.5
FvH4_4g05080 Fragaria vesca HOM05D004959 ORTHO05D005961 4.3e-54 215.7 244 46.7
Carub.0007s2107 Capsella rubella HOM05D004959 ORTHO05D005961 7.3e-54 214.9 244 45.1
Ah.09g226960 Amaranthus hybridus HOM05D004959 ORTHO05D005961 1.2e-53 214.2 226 49.6
SGA_v2.0_scaffold99G29470 Striga asiatica HOM05D004959 ORTHO05D005961 1.6e-53 213.8 241 50.6
BcaNung06192 Brassica carinata HOM05D004959 ORTHO05D005961 2.1e-53 213.4 244 52.9
Nitab4.5_0010326g0010 Nicotiana tabacum HOM05D004959 ORTHO05D005961 2.1e-53 213.4 212 53.3
AL7G33790 Arabidopsis lyrata HOM05D004959 ORTHO05D005961 2.8e-53 213.0 244 45.9
SGA_v2.0_scaffold36G14263 Striga asiatica HOM05D004959 ORTHO05D005961 4.7e-53 212.2 235 49.8
MD13G1224700 Malus domestica HOM05D004959 ORTHO05D005961 8.0e-53 211.5 235 48.1
PSO478G4754 Papaver somniferum HOM05D004959 ORTHO05D005961 8.0e-53 211.5 176 59.1
AT4G20060 Arabidopsis thaliana HOM05D004959 ORTHO05D005961 1.4e-52 210.7 244 46.3
Sp7g18520 Schrenkiella parvula HOM05D004959 ORTHO05D005961 3.1e-52 209.5 238 44.5
Thhalv10024260m.g Eutrema salsugineum HOM05D004959 ORTHO05D005961 4.0e-52 209.1 244 45.9
CARHR226870 Cardamine hirsuta HOM05D004959 ORTHO05D005961 1.2e-51 207.6 244 43.4
BraA01t01128Z Brassica rapa HOM05D004959 ORTHO05D005961 1.5e-51 207.2 238 44.5
LjContig00564g0005363 Lotus japonicus HOM05D004959 ORTHO05D005961 4.1e-49 199.1 175 58.9
Aa31LG6G2470 Aethionema arabicum HOM05D004959 ORTHO05D005961 7.0e-49 198.4 246 48.0
BolC1t01373H Brassica oleracea HOM05D004959 ORTHO05D005961 7.0e-49 198.4 244 43.4
Oeu021359.1 Olea europaea HOM05D004959 ORTHO05D005961 7.0e-49 198.4 236 46.2
C01p14060 Brassica napus HOM05D004959 ORTHO05D005961 1.7e-47 193.7 244 42.6
SHI28139 Sapria himalayana HOM05D004959 ORTHO05D005961 3.9e-47 192.6 175 54.3
Phvul.005G124450 Phaseolus vulgaris HOM05D004959 ORTHO05D005961 6.6e-47 191.8 169 60.4
arahy.Tifrunner.gnm1.ann1.WXF40H Arachis hypogaea HOM05D004959 ORTHO05D005961 1.9e-46 190.3 245 46.1
A01p11860 Brassica napus HOM05D004959 ORTHO05D005961 4.3e-46 189.1 244 48.8
arahy.Tifrunner.gnm1.ann1.C6XSUD Arachis hypogaea HOM05D004959 ORTHO05D005961 1.2e-45 187.6 245 45.7
unitig_46.g18488 Utricularia gibba HOM05D004959 ORTHO05D005961 1.6e-45 187.2 233 45.1
MD16G1229900 Malus domestica HOM05D004959 ORTHO05D005961 2.8e-45 186.4 242 43.4
TPR.G23000 Trifolium pratense HOM05D004959 ORTHO05D005961 2.8e-45 186.4 167 58.7
HanXRQChr04g0121291 Helianthus annuus HOM05D004959 ORTHO05D005961 8.1e-45 184.9 188 56.9
SEGI_31831 Sequoiadendron giganteum HOM05D004959 ORTHO05D005961 3.4e-43 179.5 237 41.8
BcaNung06193 Brassica carinata HOM05D004959 ORTHO05D005961 1.7e-42 177.2 187 49.2
BcaB03g11657 Brassica carinata HOM05D004959 ORTHO05D005961 5.6e-38 162.2 193 45.1
Pp3c21_2460 Physcomitrium patens HOM05D004959 ORTHO05D005961 5.2e-36 155.6 232 35.8
Mapoly0306s0002 Marchantia polymorpha HOM05D004959 ORTHO05D005961 2.4e-33 146.7 265 32.5
Zm00001eb126950 Zea mays HOM05D004959 ORTHO05D005961 1.2e-32 144.4 236 34.7
AagrBONN_evm.TU.Sc2ySwM_228.5373 Anthoceros agrestis HOM05D004959 ORTHO05D005961 1.0e-31 141.4 236 35.6
Duzib248G0683 Durio zibethinus HOM05D004959 ORTHO05D005961 3.6e-29 132.9 153 47.7
Os01g0188200 Oryza sativa ssp. japonica HOM05D004959 ORTHO05D005961 6.4e-26 122.1 254 31.9
SMO111G0127 Selaginella moellendorffii HOM05D004959 ORTHO05D005961 6.4e-26 122.1 227 33.0
CBR_g16049 Chara braunii HOM05D004959 ORTHO05D005961 2.7e-24 116.7 268 30.6
Haze_06165 Corylus avellana HOM05D004959 ORTHO05D005961 6.2e-21 105.5 138 45.7
Ca_14573_v3 Cicer arietinum L. HOM05D004959 ORTHO05D005961 1.3e-18 97.8 123 46.3
Ca_14572_v3 Cicer arietinum L. HOM05D004959 ORTHO05D005961 1.9e-17 94.0 125 44.8
Psat2g088000 Pisum sativum HOM05D004959 ORTHO05D005961 5.6e-14 82.4 96 47.9
Ca_14567_v3 Cicer arietinum L. HOM05D004959 ORTHO05D005961 3.4e-11 73.2 91 45.1
TAR622G1187 Trochodendron aralioides HOM05D004959 ORTHO05D005961 1.5e-06 57.8 92 44.6


User provided reference genes

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