Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018520 Camellia sinensis var. sinensis HOM05D012088 ORTHO05D014145 7.8e-52 206.8 103 100.0
CSS0007838 Camellia sinensis var. sinensis HOM05D012088 ORTHO05D014145 3.8e-14 81.6 58 72.4
CSS0002516 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D014145 1.6e-12 76.3 53 77.4
CSS0024470 Camellia sinensis var. sinensis HOM05D012088 ORTHO05D014145 1.6e-12 76.3 55 74.5
CSS0034897 Camellia sinensis var. sinensis HOM05D012088 ORTHO05D014145 1.6e-12 76.3 63 68.3
CSS0024000 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D000230 2.7e-12 75.5 53 77.4
CSS0037793 Camellia sinensis var. sinensis HOM05D001092 ORTHO05D000923 1.3e-11 73.2 54 75.9
CSS0000457 Camellia sinensis var. sinensis HOM05D012088 ORTHO05D014145 1.7e-11 72.8 57 70.2
CSS0000571 Camellia sinensis var. sinensis HOM05D004954 ORTHO05D014145 9.6e-10 67.0 57 70.2
CSS0029324 Camellia sinensis var. sinensis HOM05D001092 ORTHO05D000923 2.1e-09 65.9 54 68.5
vmacro08678 Vaccinium macrocarpon HOM05D000129 ORTHO05D000997 2.1e-09 65.9 36 75.0
CiPaw.10G140500 Carya illinoinensis HOM05D000129 ORTHO05D000997 2.4e-08 62.4 36 72.2
CSS0010447 Camellia sinensis var. sinensis HOM05D000740 ORTHO05D014145 5.3e-08 61.2 64 60.9
Eucgr.K03180 Eucalyptus grandis HOM05D000129 ORTHO05D000997 9.0e-08 60.5 35 71.4
Zm00001eb355420 Zea mays HOM05D000129 ORTHO05D000997 1.2e-07 60.1 35 71.4
CSS0012027 Camellia sinensis var. sinensis HOM05D004755 ORTHO05D014145 1.5e-07 59.7 58 62.1
CiPaw.09G186000 Carya illinoinensis HOM05D000129 ORTHO05D000997 1.5e-07 59.7 36 69.4
Gohir.A01G218800 Gossypium hirsutum HOM05D000129 ORTHO05D000997 1.5e-07 59.7 35 68.6
Dinv35671 Davidia involucrata HOM05D000129 ORTHO05D000997 2.0e-07 59.3 36 66.7
Duzib128G0220 Durio zibethinus HOM05D000129 ORTHO05D000997 2.0e-07 59.3 35 68.6
Duzib093G0528 Durio zibethinus HOM05D000129 ORTHO05D000997 2.6e-07 58.9 35 68.6
QL07p046020 Quercus lobata HOM05D000129 ORTHO05D000997 2.6e-07 58.9 35 71.4
Thecc.05G048500 Theobroma cacao HOM05D000129 ORTHO05D000997 2.6e-07 58.9 35 68.6
TAR633G0930 Trochodendron aralioides HOM05D000041 ORTHO05D000061 2.6e-07 58.9 35 71.4
COL.COLO4_08718 Corchorus olitorius HOM05D000129 ORTHO05D000997 7.6e-07 57.4 35 68.6
Gorai.002G252900 Gossypium raimondii HOM05D000129 ORTHO05D000997 7.6e-07 57.4 35 65.7
Prupe.6G246300 Prunus persica HOM05D000129 ORTHO05D000997 7.6e-07 57.4 35 71.4
Duzib106G0045 Durio zibethinus HOM05D000129 ORTHO05D000997 9.9e-07 57.0 35 62.9
Nn2g10552 Nelumbo nucifera HOM05D000129 ORTHO05D000997 9.9e-07 57.0 35 65.7
FvH4_6g14760 Fragaria vesca HOM05D000129 ORTHO05D000997 1.3e-06 56.6 35 65.7
FAN05G2820 Fragaria x ananassa HOM05D000129 ORTHO05D000997 1.3e-06 56.6 35 65.7
FAN09G0653 Fragaria x ananassa HOM05D000129 ORTHO05D000997 1.3e-06 56.6 35 65.7
FAN14G4022 Fragaria x ananassa HOM05D000129 ORTHO05D000997 1.3e-06 56.6 35 65.7
Lalb_Chr06g0171151 Lupinus albus HOM05D000129 ORTHO05D000997 1.3e-06 56.6 36 66.7
PGR004G2321 Punica granatum HOM05D000129 ORTHO05D000997 1.3e-06 56.6 35 65.7
TAR623G0625 Trochodendron aralioides HOM05D000129 ORTHO05D000997 1.3e-06 56.6 35 65.7
FAN02G3768 Fragaria x ananassa HOM05D000129 ORTHO05D000997 1.7e-06 56.2 35 65.7
Gohir.D01G207800 Gossypium hirsutum HOM05D000129 ORTHO05D000997 1.7e-06 56.2 35 62.9
DCAR_014950 Daucus carota HOM05D000129 ORTHO05D000997 2.2e-06 55.8 40 57.5
Atru.chr8.2501 Acer truncatum HOM05D000129 ORTHO05D000997 2.9e-06 55.5 34 67.6
PSO384G4332 Papaver somniferum HOM05D000129 ORTHO05D000997 2.9e-06 55.5 35 62.9
Aqoxy2G01942 Aquilegia oxysepala HOM05D000129 ORTHO05D000997 3.8e-06 55.1 35 60.0
MD12G1132100 Malus domestica HOM05D000129 ORTHO05D000997 3.8e-06 55.1 35 68.6
PSO339G5425 Papaver somniferum HOM05D000129 ORTHO05D000997 3.8e-06 55.1 35 62.9
CSS0004530 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D014145 4.9e-06 54.7 47 68.1
Oeu040993.2 Olea europaea HOM05D000129 ORTHO05D000997 4.9e-06 54.7 42 57.1
Cpa.g.sc114.18 Carica papaya HOM05D000129 ORTHO05D000997 6.4e-06 54.3 35 62.9
Nn2g12831 Nelumbo nucifera HOM05D000129 ORTHO05D000997 6.4e-06 54.3 35 62.9
Oeu040991.1 Olea europaea HOM05D000129 ORTHO05D000997 6.4e-06 54.3 42 57.1
Psat0s765g0200 Pisum sativum HOM05D002906 ORTHO05D003211 6.4e-06 54.3 46 71.7
Lsat_1_v5_gn_5_167061 Lactuca sativa HOM05D000129 ORTHO05D000997 8.4e-06 53.9 35 65.7
RcHm_v2.0_Chr3g0467981 Rosa chinensis HOM05D000129 ORTHO05D000997 8.4e-06 53.9 35 60.0
HPP92_015534 Vanilla planifolia HOM05D000129 ORTHO05D000997 8.4e-06 53.9 34 67.6
HPP92_015566 Vanilla planifolia HOM05D000129 ORTHO05D000997 8.4e-06 53.9 34 67.6


User provided reference genes

Program Settings