Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018519 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 4.8e-124 448.0 248 100.0
CSS0006596 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 2.2e-121 439.1 250 98.0
Actinidia23607 Actinidia chinensis HOM05D006710 ORTHO05D008353 5.2e-102 374.8 252 77.8
Actinidia05724 Actinidia chinensis HOM05D006710 ORTHO05D008353 6.8e-102 374.4 254 80.7
vmacro05032 Vaccinium macrocarpon HOM05D006710 ORTHO05D008353 3.7e-100 368.6 224 82.6
Dinv40255 Davidia involucrata HOM05D006710 ORTHO05D008353 1.1e-99 367.1 249 76.3
QL03p004347 Quercus lobata HOM05D006710 ORTHO05D008353 6.6e-97 357.8 247 76.5
Rhsim07G0179500 Rhododendron simsii HOM05D006710 ORTHO05D008353 7.2e-96 354.4 255 72.9
Potri.013G026500 Populus trichocarpa HOM05D006710 ORTHO05D008353 4.0e-94 348.6 252 71.8
Manes.09G163400 Manihot esculenta HOM05D006710 ORTHO05D008353 1.5e-93 346.7 250 73.6
Sabra13G0027300 Salix brachista HOM05D006710 ORTHO05D008353 7.5e-93 344.4 251 71.3
TWI56G0551 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 4.9e-92 341.7 247 72.5
Cfa006542 Carpinus fangiana HOM05D006710 ORTHO05D008353 8.3e-92 340.9 211 81.5
CiPaw.08G166900 Carya illinoinensis HOM05D006710 ORTHO05D008353 8.3e-92 340.9 253 71.5
Cpa.g.sc48.8 Carica papaya HOM05D006710 ORTHO05D008353 1.4e-91 340.1 213 80.3
Haze_04239 Corylus avellana HOM05D006710 ORTHO05D008353 1.8e-91 339.7 212 80.7
Duzib177G0772 Durio zibethinus HOM05D006710 ORTHO05D008353 4.5e-90 335.1 217 77.4
Thecc.05G308800 Theobroma cacao HOM05D006710 ORTHO05D008353 4.5e-90 335.1 247 68.8
Lj9A681T40 Lonicera japonica HOM05D006710 ORTHO05D008353 5.9e-90 334.7 248 70.2
AUR62005111 Chenopodium quinoa HOM05D006710 ORTHO05D008353 7.8e-90 334.3 217 74.2
TWI12G0766 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 1.0e-89 334.0 247 70.0
Gohir.D11G272800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 2.9e-89 332.4 247 69.6
Gorai.007G294100 Gossypium raimondii HOM05D006710 ORTHO05D008353 2.9e-89 332.4 247 69.6
PGR031G3544 Punica granatum HOM05D006710 ORTHO05D008353 3.8e-89 332.0 214 79.9
Ciclev10002268m.g Citrus clementina HOM05D006710 ORTHO05D008353 8.6e-89 330.9 223 75.3
AUR62000864 Chenopodium quinoa HOM05D006710 ORTHO05D008353 4.3e-88 328.6 217 73.3
Nn4g26145 Nelumbo nucifera HOM05D006710 ORTHO05D008353 5.6e-88 328.2 255 69.0
CsaV3_2G004900 Cucumis sativus L. HOM05D006710 ORTHO05D008353 9.5e-88 327.4 210 76.2
COL.COLO4_13519 Corchorus olitorius HOM05D000735 ORTHO05D000838 2.8e-87 325.9 232 70.7
FAN05G4089 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.8e-86 323.2 213 76.5
RcHm_v2.0_Chr3g0454051 Rosa chinensis HOM05D006710 ORTHO05D008353 3.1e-86 322.4 253 68.8
EL10Ac4g09302 Beta vulgaris HOM05D006710 ORTHO05D008353 5.2e-86 321.6 215 74.0
Prupe.6G330500 Prunus persica HOM05D006710 ORTHO05D008353 5.2e-86 321.6 220 73.6
CAN.G809.16 Capsicum annuum HOM05D006710 ORTHO05D008353 1.2e-85 320.5 214 77.1
Nitab4.5_0010747g0020 Nicotiana tabacum HOM05D006710 ORTHO05D008353 1.5e-85 320.1 247 70.0
Peaxi162Scf00071g00728 Petunia axillaris HOM05D006710 ORTHO05D008353 1.5e-85 320.1 210 78.1
MD04G1209500 Malus domestica HOM05D006710 ORTHO05D008353 2.0e-85 319.7 247 66.0
Atru.chr2.492 Acer truncatum HOM05D006710 ORTHO05D008353 2.6e-85 319.3 249 70.3
Nitab4.5_0000424g0030 Nicotiana tabacum HOM05D006710 ORTHO05D008353 4.4e-85 318.5 241 71.0
arahy.Tifrunner.gnm1.ann1.ACRB0G Arachis hypogaea HOM05D006710 ORTHO05D008353 5.8e-85 318.2 212 75.9
arahy.Tifrunner.gnm1.ann1.KZLY5F Arachis hypogaea HOM05D006710 ORTHO05D008353 1.3e-84 317.0 212 75.5
Eucgr.H04455 Eucalyptus grandis HOM05D006710 ORTHO05D008353 1.7e-84 316.6 249 67.5
Gohir.A13G173100 Gossypium hirsutum HOM05D006710 ORTHO05D008353 1.7e-84 316.6 218 72.5
Gorai.013G204100 Gossypium raimondii HOM05D006710 ORTHO05D008353 1.7e-84 316.6 212 73.1
MSTRG.20477 Avicennia marina HOM05D006710 ORTHO05D008353 2.2e-84 316.2 215 72.6
PGSC0003DMG400026653 Solanum tuberosum HOM05D006710 ORTHO05D008353 2.2e-84 316.2 212 76.9
Sopen08g012960 Solanum pennellii HOM05D006710 ORTHO05D008353 3.7e-84 315.5 212 76.4
Gohir.D13G178900 Gossypium hirsutum HOM05D006710 ORTHO05D008353 6.4e-84 314.7 212 72.6
Solyc08g043180.3 Solanum lycopersicum HOM05D006710 ORTHO05D008353 1.1e-83 313.9 212 76.4
FAN14G5365 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.4e-83 313.5 263 64.6
MD12G1224100 Malus domestica HOM05D006710 ORTHO05D008353 1.9e-83 313.2 214 73.4
CANSAT54G0344 Cannabis sativa HOM05D006710 ORTHO05D008353 4.1e-83 312.0 257 63.8
HanXRQChr09g0258761 Helianthus annuus HOM05D006710 ORTHO05D008353 4.1e-83 312.0 217 73.7
THA.LOC104802809 Tarenaya hassleriana HOM05D006710 ORTHO05D008353 7.0e-83 311.2 213 72.3
Glyma.10G157000 Glycine max HOM05D006710 ORTHO05D008353 9.2e-83 310.8 212 73.6
Lalb_Chr15g0077091 Lupinus albus HOM05D006710 ORTHO05D008353 9.2e-83 310.8 210 73.8
CARHR185990 Cardamine hirsuta HOM05D006710 ORTHO05D008353 1.2e-82 310.5 219 71.2
Thhalv10004765m.g Eutrema salsugineum HOM05D006710 ORTHO05D008353 1.6e-82 310.1 212 71.7
AL6G39620 Arabidopsis lyrata HOM05D006710 ORTHO05D008353 2.7e-82 309.3 217 70.0
Aqoxy2G03215 Aquilegia oxysepala HOM05D006710 ORTHO05D008353 7.8e-82 307.8 247 68.0
AT5G27390 Arabidopsis thaliana HOM05D006710 ORTHO05D008353 1.3e-81 307.0 217 70.0
Sp2g20620 Schrenkiella parvula HOM05D006710 ORTHO05D008353 1.7e-81 306.6 213 71.8
MBI19_g27535_MAGBIO Magnolia biondii HOM05D006710 ORTHO05D008353 8.6e-81 304.3 216 70.4
Carub.0006s2515 Capsella rubella HOM05D006710 ORTHO05D008353 2.5e-80 302.8 217 68.7
SalBow8G3090 Salvia bowleyana HOM05D006710 ORTHO05D008353 2.5e-80 302.8 179 81.0
Sed0009429 Sechium edule HOM05D006710 ORTHO05D008353 3.3e-80 302.4 259 62.5
ECA232G0378 Erigeron canadensis HOM05D006710 ORTHO05D008353 4.3e-80 302.0 224 68.3
unitig_0.g2209 Utricularia gibba HOM05D006710 ORTHO05D008353 4.3e-80 302.0 211 70.6
VMungo0720G2835 Vigna mungo HOM05D006710 ORTHO05D008353 4.3e-80 302.0 216 71.8
Migut.B01148 Erythranthe guttata HOM05D006710 ORTHO05D008353 5.6e-80 301.6 178 82.6
Phvul.007G182300 Phaseolus vulgaris HOM05D006710 ORTHO05D008353 5.6e-80 301.6 212 70.8
Hund07043 Selenicereus undatus HOM05D006710 ORTHO05D008353 1.2e-79 300.4 212 71.2
FAN09G4503 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.6e-79 300.1 289 59.5
Lalb_Chr02g0148381 Lupinus albus HOM05D006710 ORTHO05D008353 2.1e-79 299.7 211 72.5
Ah.06g190140 Amaranthus hybridus HOM05D006710 ORTHO05D008353 3.6e-79 298.9 209 72.2
BcaNung04366 Brassica carinata HOM05D006710 ORTHO05D008353 1.1e-78 297.4 212 69.3
CDE08G1170 Ceratophyllum demersum HOM05D006710 ORTHO05D008353 1.1e-78 297.4 218 67.9
BcaNung02465 Brassica carinata HOM05D006710 ORTHO05D008353 1.4e-78 297.0 210 69.5
ClCG02G016080 Citrullus lanatus HOM05D006710 ORTHO05D008353 8.9e-78 294.3 219 68.9
Ca_10089_v3 Cicer arietinum L. HOM05D006710 ORTHO05D008353 4.4e-77 292.0 222 65.8
Lj5g0024082 Lotus japonicus HOM05D006710 ORTHO05D008353 3.7e-76 288.9 219 66.7
Sc09g0003360 Simmondsia chinensis HOM05D006710 ORTHO05D006029 3.7e-76 288.9 162 84.0
FAN14G4294 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.1e-75 287.3 259 63.7
Gohir.A11G262800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 5.4e-75 285.0 186 75.8
Os05g0401300 Oryza sativa ssp. japonica HOM05D006710 ORTHO05D008353 7.0e-75 284.6 227 62.6
A06p37590 Brassica napus HOM05D006710 ORTHO05D008353 3.5e-74 282.3 221 66.5
ATR0626G338 Amborella trichopoda HOM05D006710 ORTHO05D008353 2.3e-73 279.6 181 75.7
C07p40720 Brassica napus HOM05D006710 ORTHO05D008353 3.0e-73 279.3 223 65.5
BolC7t44600H Brassica oleracea HOM05D006710 ORTHO05D008353 3.0e-73 279.3 223 65.5
Zm00001eb346790 Zea mays HOM05D006710 ORTHO05D008353 3.9e-73 278.9 186 69.4
PSO170G1405 Papaver somniferum HOM05D006710 ORTHO05D008353 2.5e-72 276.2 219 61.6
PSO407G0185 Papaver somniferum HOM05D006710 ORTHO05D008353 3.3e-72 275.8 219 61.6
HPP92_013667 Vanilla planifolia HOM05D006710 ORTHO05D008353 1.1e-70 270.8 206 67.0
Psat6g148920 Pisum sativum HOM05D006710 ORTHO05D008353 1.4e-70 270.4 220 61.8
Medtr1g082430 Medicago truncatula HOM05D006710 ORTHO05D008353 3.1e-70 269.2 220 61.4
SGA_v2.0_scaffold244G44356 Striga asiatica HOM05D006710 ORTHO05D008353 2.2e-68 263.1 217 61.8
Lsat_1_v5_gn_8_116001 Lactuca sativa HOM05D006710 ORTHO05D008353 2.9e-68 262.7 191 69.6
Aa31LG11G9170 Aethionema arabicum HOM05D006710 ORTHO05D008353 2.7e-66 256.1 238 59.7
GSVIVG01000003001 Vitis vinifera HOM05D006710 ORTHO05D008353 3.5e-66 255.8 145 85.5
SEGI_09082 Sequoiadendron giganteum HOM05D006710 ORTHO05D008353 5.1e-65 251.9 185 63.2
TAR362G0522 Trochodendron aralioides HOM05D006710 ORTHO05D008353 4.3e-64 248.8 145 84.1
BraA06t26678Z Brassica rapa HOM05D006710 ORTHO05D008353 3.6e-63 245.7 200 65.0
CDE02G4396 Ceratophyllum demersum HOM05D000137 ORTHO05D000503 8.4e-60 234.6 175 68.0
Glyma.20G231700 Glycine max HOM05D006710 ORTHO05D008353 9.9e-53 211.1 134 76.9
MELO3C004308.2 Cucumis melo HOM05D006710 ORTHO05D008353 2.3e-49 199.9 141 72.3
TPR.G327 Trifolium pratense HOM05D006710 ORTHO05D008353 3.0e-49 199.5 164 61.6
FAN05G4701 Fragaria x ananassa HOM05D006710 ORTHO05D008353 8.7e-49 198.0 237 51.9
AagrBONN_evm.TU.Sc2ySwM_368.548 Anthoceros agrestis HOM05D006710 ORTHO05D008353 1.6e-47 193.7 186 51.6
Mapoly0057s0090 Marchantia polymorpha HOM05D006710 ORTHO05D008353 1.9e-43 180.3 173 49.7
SMO356G0400 Selaginella moellendorffii HOM05D006710 ORTHO05D008353 6.0e-42 175.3 200 46.0
FvH4_6g05310 Fragaria vesca HOM05D006710 ORTHO05D008353 1.3e-41 174.1 161 61.5
Cc02_g32660 Coffea canephora HOM05D006710 ORTHO05D008353 8.7e-41 171.4 113 80.5
Pp3c11_21800 Physcomitrium patens HOM05D006710 ORTHO05D008353 8.7e-41 171.4 179 47.5
Cc02_g32640 Coffea canephora HOM05D006710 ORTHO05D008353 4.3e-40 169.1 95 85.3
DCAR_022246 Daucus carota HOM05D006710 ORTHO05D008353 4.9e-36 155.6 114 71.1
FAN02G1407 Fragaria x ananassa HOM05D006710 ORTHO05D008353 3.1e-30 136.3 134 59.0
EL10Ac7g17500 Beta vulgaris HOM05D006710 ORTHO05D008353 1.4e-27 127.5 96 64.6
Thecc.05G311300 Theobroma cacao HOM05D000126 ORTHO05D008353 5.1e-25 119.0 68 82.4
CBR_g32459 Chara braunii HOM05D000019 ORTHO05D000353 7.4e-16 88.6 177 30.5
MCO13G061 Micromonas commoda HOM05D006710 ORTHO05D008353 6.9e-14 82.0 132 32.6
PRCOL_00002748 Prasinoderma coloniale HOM05D006710 ORTHO05D008353 2.7e-10 70.1 139 33.1
Cre13.g564050 Chlamydomonas reinhardtii HOM05D006710 ORTHO05D008353 2.3e-09 67.0 139 28.8
Dinv22904 Davidia involucrata HOM05D006710 ORTHO05D008353 8.2e-07 58.5 62 45.2
HPP92_013649 Vanilla planifolia HOM05D006710 ORTHO05D008353 4.1e-06 56.2 35 74.3


User provided reference genes

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