Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018513 Camellia sinensis var. sinensis HOM05D012178 ORTHO05D014302 6.2e-89 330.9 180 100.0
CSS0039967 Camellia sinensis var. sinensis HOM05D012178 ORTHO05D014302 3.9e-83 311.6 180 95.6
Dinv25233 Davidia involucrata HOM05D012178 ORTHO05D014302 5.9e-23 111.7 180 48.9
Actinidia14794 Actinidia chinensis HOM05D012178 ORTHO05D014302 1.0e-19 100.9 180 45.6
Aqoxy4G02644 Aquilegia oxysepala HOM05D012178 ORTHO05D014302 3.9e-14 82.4 170 37.1
COL.COLO4_16995 Corchorus olitorius HOM05D012178 ORTHO05D014302 3.3e-13 79.3 174 36.8
MBI04_g20346_MAGBIO Magnolia biondii HOM05D012178 ORTHO05D014302 1.2e-10 70.9 141 41.1
Eucgr.E00266 Eucalyptus grandis HOM05D012178 ORTHO05D014302 7.5e-10 68.2 182 36.8
Potri.001G140400 Populus trichocarpa HOM05D012178 ORTHO05D014302 7.5e-10 68.2 177 37.9
Thecc.03G305400 Theobroma cacao HOM05D012178 ORTHO05D014302 6.4e-09 65.1 108 43.5
Actinidia14604 Actinidia chinensis HOM05D000778 ORTHO05D000601 9.2e-08 61.2 174 32.2
Duzib168G0519 Durio zibethinus HOM05D000778 ORTHO05D000601 1.6e-07 60.5 150 35.3
HanXRQChr13g0402941 Helianthus annuus HOM05D000778 ORTHO05D000601 1.6e-07 60.5 132 36.4
QL07p026771 Quercus lobata HOM05D000778 ORTHO05D000601 2.7e-07 59.7 113 39.8
Rhsim02G0200700 Rhododendron simsii HOM05D000778 ORTHO05D000601 2.7e-07 59.7 173 33.5
BcaC01g05696 Brassica carinata HOM05D000778 ORTHO05D000601 3.5e-07 59.3 116 38.8
BolC3t14711H Brassica oleracea HOM05D000778 ORTHO05D000601 3.5e-07 59.3 116 38.8
MBI04_g29346_MAGBIO Magnolia biondii HOM05D000778 ORTHO05D000601 3.5e-07 59.3 140 37.9
Lalb_Chr22g0361471 Lupinus albus HOM05D000778 ORTHO05D000601 4.6e-07 58.9 186 30.1
arahy.Tifrunner.gnm1.ann1.D0K4TI Arachis hypogaea HOM05D000778 ORTHO05D000601 6.0e-07 58.5 155 34.8
Ca_13028_v3 Cicer arietinum L. HOM05D000778 ORTHO05D000601 6.0e-07 58.5 127 37.0
TAR626G0265 Trochodendron aralioides HOM05D000778 ORTHO05D000601 6.0e-07 58.5 176 33.5
BcaB01g03873 Brassica carinata HOM05D000778 ORTHO05D000601 7.8e-07 58.2 145 36.6
C03p23090 Brassica napus HOM05D000778 ORTHO05D000601 7.8e-07 58.2 116 37.9
Phvul.007G125750 Phaseolus vulgaris HOM05D005428 ORTHO05D006876 7.8e-07 58.2 122 38.5
TAR626G1583 Trochodendron aralioides HOM05D000778 ORTHO05D000601 7.8e-07 58.2 176 33.5
Actinidia13235 Actinidia chinensis HOM05D000778 ORTHO05D000601 1.0e-06 57.8 173 31.8
arahy.Tifrunner.gnm1.ann1.XG0Z4E Arachis hypogaea HOM05D000778 ORTHO05D000601 1.0e-06 57.8 121 38.0
Cfa020080 Carpinus fangiana HOM05D000778 ORTHO05D000601 1.0e-06 57.8 98 43.9
HanXRQChr02g0052901 Helianthus annuus HOM05D000778 ORTHO05D000601 1.0e-06 57.8 103 39.8
MBI01_g36595_MAGBIO Magnolia biondii HOM05D000778 ORTHO05D000601 1.0e-06 57.8 141 36.9
Nitab4.5_0000109g0300 Nicotiana tabacum HOM05D000778 ORTHO05D000601 1.0e-06 57.8 169 33.1
Nitab4.5_0008266g0010 Nicotiana tabacum HOM05D000778 ORTHO05D000601 1.0e-06 57.8 169 33.1
RcHm_v2.0_Chr6g0297971 Rosa chinensis HOM05D000778 ORTHO05D000601 1.0e-06 57.8 177 32.8
SalBow5G4642 Salvia bowleyana HOM05D000778 ORTHO05D000601 1.0e-06 57.8 139 37.4
Sed0001287 Sechium edule HOM05D000778 ORTHO05D000601 1.0e-06 57.8 143 35.0
VMungo0720G1760 Vigna mungo HOM05D000778 ORTHO05D000601 1.0e-06 57.8 122 38.5
Aa31LG5G21020 Aethionema arabicum HOM05D000778 ORTHO05D000601 1.3e-06 57.4 172 35.5
Cfa013147 Carpinus fangiana HOM05D000778 ORTHO05D000601 1.3e-06 57.4 134 39.6
QL02p021758 Quercus lobata HOM05D000778 ORTHO05D000601 1.3e-06 57.4 136 39.0
vmacro05178 Vaccinium macrocarpon HOM05D000778 ORTHO05D000601 1.3e-06 57.4 185 32.4
Atru.chr7.2424 Acer truncatum HOM05D000778 ORTHO05D000601 1.7e-06 57.0 173 34.1
Actinidia22345 Actinidia chinensis HOM05D000778 ORTHO05D000601 1.7e-06 57.0 166 33.1
A03p19800 Brassica napus HOM05D000778 ORTHO05D000601 1.7e-06 57.0 127 37.8
Aa31LG8G9570 Aethionema arabicum HOM05D000778 ORTHO05D000601 2.3e-06 56.6 117 34.2
BraA03t11232Z Brassica rapa HOM05D000778 ORTHO05D000601 2.3e-06 56.6 127 37.8
Gohir.A06G098218 Gossypium hirsutum HOM05D000778 ORTHO05D000601 2.3e-06 56.6 140 36.4
Gohir.D06G100200 Gossypium hirsutum HOM05D000778 ORTHO05D000601 2.3e-06 56.6 140 35.7
Gorai.010G115100 Gossypium raimondii HOM05D000778 ORTHO05D000601 2.3e-06 56.6 140 35.7
SEGI_22476 Sequoiadendron giganteum HOM05D000778 ORTHO05D000601 2.3e-06 56.6 159 30.2
TWI32G1045 Tripterygium wilfordii HOM05D000778 ORTHO05D000601 2.3e-06 56.6 147 36.7
TAR636G1713 Trochodendron aralioides HOM05D000778 ORTHO05D000601 2.3e-06 56.6 164 33.5
ATR0697G012 Amborella trichopoda HOM05D000778 ORTHO05D000601 3.0e-06 56.2 89 41.6
ATR1120G030 Amborella trichopoda HOM05D000778 ORTHO05D000601 3.0e-06 56.2 148 35.8
arahy.Tifrunner.gnm1.ann1.K99CPJ Arachis hypogaea HOM05D000778 ORTHO05D000601 3.0e-06 56.2 128 35.9
BcaC02g11700 Brassica carinata HOM05D000778 ORTHO05D000601 3.0e-06 56.2 97 42.3
C04p12180 Brassica napus HOM05D000778 ORTHO05D000601 3.0e-06 56.2 97 42.3
CSS0021475 Camellia sinensis var. sinensis HOM05D000778 ORTHO05D000601 3.0e-06 56.2 173 31.8
CANSAT25G2802 Cannabis sativa HOM05D000778 ORTHO05D000601 3.0e-06 56.2 177 32.8
Eucgr.C01741 Eucalyptus grandis HOM05D000778 ORTHO05D000601 3.0e-06 56.2 139 33.1
Sed0021020 Sechium edule HOM05D000778 ORTHO05D000601 3.0e-06 56.2 154 33.1
arahy.Tifrunner.gnm1.ann1.PAET17 Arachis hypogaea HOM05D000778 ORTHO05D000601 3.9e-06 55.8 119 35.3
ClCG05G016890 Citrullus lanatus HOM05D000778 ORTHO05D000601 3.9e-06 55.8 143 34.3
CsaV3_3G046420 Cucumis sativus L. HOM05D000778 ORTHO05D000601 3.9e-06 55.8 151 33.8
Oeu043030.1 Olea europaea HOM05D000778 ORTHO05D000601 3.9e-06 55.8 177 29.9
Oeu044681.1 Olea europaea HOM05D000778 ORTHO05D000601 3.9e-06 55.8 173 32.4
Hund14988 Selenicereus undatus HOM05D000778 ORTHO05D000601 3.9e-06 55.8 135 34.8
SGA_v2.0_scaffold64G21928 Striga asiatica HOM05D000778 ORTHO05D000601 3.9e-06 55.8 169 33.7
TPR.G27196 Trifolium pratense HOM05D000778 ORTHO05D000601 3.9e-06 55.8 121 35.5
MSTRG.11618 Avicennia marina HOM05D000778 ORTHO05D000601 5.0e-06 55.5 126 37.3
MSTRG.26585 Avicennia marina HOM05D000778 ORTHO05D000601 5.0e-06 55.5 82 42.7
EL10Ac5g11820 Beta vulgaris HOM05D000778 ORTHO05D000601 5.0e-06 55.5 135 34.1
CANSAT64G0079 Cannabis sativa HOM05D000778 ORTHO05D000601 5.0e-06 55.5 104 40.4
CAN.G1230.7 Capsicum annuum HOM05D000778 ORTHO05D000601 5.0e-06 55.5 169 33.7
HanXRQChr13g0398691 Helianthus annuus HOM05D000778 ORTHO05D000601 5.0e-06 55.5 84 44.0
Lj5g0007725 Lotus japonicus HOM05D000778 ORTHO05D000601 5.0e-06 55.5 146 33.6
Nn2g12061 Nelumbo nucifera HOM05D000778 ORTHO05D000601 5.0e-06 55.5 168 33.3
Potri.006G200400 Populus trichocarpa HOM05D000778 ORTHO05D000601 5.0e-06 55.5 113 38.1
Sp7g30090 Schrenkiella parvula HOM05D000778 ORTHO05D000601 5.0e-06 55.5 72 48.6
Sopen06g024510 Solanum pennellii HOM05D000778 ORTHO05D000601 5.0e-06 55.5 175 34.3
TAR362G1294 Trochodendron aralioides HOM05D000778 ORTHO05D000601 5.0e-06 55.5 106 39.6
MSTRG.10417 Avicennia marina HOM05D000778 ORTHO05D000601 6.6e-06 55.1 117 37.6
CiPaw.07G223100 Carya illinoinensis HOM05D000778 ORTHO05D000601 6.6e-06 55.1 153 33.3
MELO3C003697.2 Cucumis melo HOM05D000778 ORTHO05D000601 6.6e-06 55.1 143 33.6
Duzib212G0041 Durio zibethinus HOM05D000778 ORTHO05D000601 6.6e-06 55.1 138 33.3
Phvul.001G197800 Phaseolus vulgaris HOM05D000778 ORTHO05D000601 6.6e-06 55.1 129 36.4
PGR042G1878 Punica granatum HOM05D012178 ORTHO05D014302 6.6e-06 55.1 173 34.1
QL06p015791 Quercus lobata HOM05D000778 ORTHO05D000601 6.6e-06 55.1 160 32.5
QL93p0113_0005 Quercus lobata HOM05D000778 ORTHO05D000601 6.6e-06 55.1 160 32.5
Rhsim07G0157700 Rhododendron simsii HOM05D000778 ORTHO05D000601 6.6e-06 55.1 158 34.2
SalBow4G1516 Salvia bowleyana HOM05D000778 ORTHO05D000601 6.6e-06 55.1 161 34.8
VMungo1383G2391 Vigna mungo HOM05D000778 ORTHO05D000601 6.6e-06 55.1 189 33.3
GSVIVG01035857001 Vitis vinifera HOM05D000778 ORTHO05D000601 6.6e-06 55.1 170 33.5
Actinidia37771 Actinidia chinensis HOM05D000778 ORTHO05D000601 8.6e-06 54.7 84 45.2
CANSAT78G0933 Cannabis sativa HOM05D000778 ORTHO05D000601 8.6e-06 54.7 119 38.7
CiPaw.09G023300 Carya illinoinensis HOM05D000778 ORTHO05D000601 8.6e-06 54.7 134 34.3
Thhalv10016634m.g Eutrema salsugineum HOM05D000778 ORTHO05D000601 8.6e-06 54.7 131 37.4
Lalb_Chr25g0287891 Lupinus albus HOM05D000778 ORTHO05D000601 8.6e-06 54.7 84 45.2
PGR031G1988 Punica granatum HOM05D000778 ORTHO05D000601 8.6e-06 54.7 125 33.6
THA.LOC104803839 Tarenaya hassleriana HOM05D000778 ORTHO05D000601 8.6e-06 54.7 140 39.3


User provided reference genes

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