Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018510 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 5.0e-199 697.6 352 100.0
Dinv35820 Davidia involucrata HOM05D008196 ORTHO05D010261 4.1e-129 465.3 347 68.6
Hma1.2p1_0547F.1_g176400 Hydrangea macrophylla HOM05D008196 ORTHO05D010261 4.3e-110 402.1 338 61.8
Dinv37347 Davidia involucrata HOM05D008196 ORTHO05D010261 1.6e-104 383.6 310 65.5
Actinidia31311 Actinidia chinensis HOM05D008196 ORTHO05D010261 2.3e-103 379.8 343 62.1
GSVIVG01033695001 Vitis vinifera HOM05D008196 ORTHO05D010261 3.7e-93 345.9 343 55.4
RhsimUnG0004600 Rhododendron simsii HOM05D008196 ORTHO05D010261 1.1e-92 344.4 350 58.6
RhsimUnG0068000 Rhododendron simsii HOM05D008196 ORTHO05D010261 1.5e-91 340.5 349 58.2
Cfa016460 Carpinus fangiana HOM05D008196 ORTHO05D010261 7.1e-89 331.6 341 53.4
TAR636G2455 Trochodendron aralioides HOM05D008196 ORTHO05D010261 2.7e-88 329.7 367 53.7
Haze_19461 Corylus avellana HOM05D008196 ORTHO05D010261 1.0e-82 311.2 366 49.2
Atru.chr8.1725_Atru.chr8.1735 Acer truncatum HOM05D008196 ORTHO05D010261 6.5e-82 308.5 341 52.8
vmacro08799 Vaccinium macrocarpon HOM05D008196 ORTHO05D010261 3.0e-79 299.7 341 52.8
Nn6g35204 Nelumbo nucifera HOM05D008196 ORTHO05D010261 4.8e-77 292.4 375 47.2
TAR633G2803 Trochodendron aralioides HOM05D008196 ORTHO05D010261 8.5e-74 281.6 360 49.7
CiPaw.10G001900 Carya illinoinensis HOM05D008196 ORTHO05D010261 1.4e-73 280.8 341 47.5
TWI74G1102 Tripterygium wilfordii HOM05D008196 ORTHO05D010261 5.1e-71 272.3 324 45.7
Ca_08867_v3 Cicer arietinum L. HOM05D008196 ORTHO05D010261 2.6e-67 260.0 344 46.2
CSS0016699 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 1.1e-65 254.6 136 97.1
Glyma.03G186700 Glycine max HOM05D008196 ORTHO05D010261 1.6e-64 250.8 347 45.2
Ca_08927_v3 Cicer arietinum L. HOM05D008196 ORTHO05D010261 2.1e-64 250.4 344 45.3
Glyma.19G186800 Glycine max HOM05D008196 ORTHO05D010261 3.9e-63 246.1 344 45.1
Lalb_Chr21g0315171 Lupinus albus HOM05D008196 ORTHO05D010261 6.7e-63 245.4 343 44.6
Phvul.001G181700 Phaseolus vulgaris HOM05D008196 ORTHO05D010261 1.5e-62 244.2 321 46.4
Psat3g040360 Pisum sativum HOM05D008196 ORTHO05D010261 9.7e-62 241.5 334 44.9
Lj1g0021041 Lotus japonicus HOM05D008196 ORTHO05D010261 9.1e-60 235.0 330 43.6
Medtr7g102410 Medicago truncatula HOM05D008196 ORTHO05D010261 4.5e-59 232.6 335 45.1
Aqoxy1G01072 Aquilegia oxysepala HOM05D008196 ORTHO05D010261 1.3e-58 231.1 351 42.5
VMungo1383G2144 Vigna mungo HOM05D008196 ORTHO05D010261 1.7e-58 230.7 347 43.5
Duzib106G1531 Durio zibethinus HOM05D008196 ORTHO05D010261 5.5e-57 225.7 290 46.2
arahy.Tifrunner.gnm1.ann1.A0NJYH Arachis hypogaea HOM05D008196 ORTHO05D010261 9.4e-57 224.9 333 41.4
TPR.G8704 Trifolium pratense HOM05D008196 ORTHO05D010261 3.0e-55 219.9 335 41.8
arahy.Tifrunner.gnm1.ann1.PXX6WP Arachis hypogaea HOM05D008196 ORTHO05D010261 7.5e-54 215.3 343 38.8
PSO063G4707 Papaver somniferum HOM05D008196 ORTHO05D010261 3.5e-51 206.5 355 39.4
Gohir.D04G108000 Gossypium hirsutum HOM05D008196 ORTHO05D010261 2.2e-50 203.8 345 40.6
Gohir.A04G069600 Gossypium hirsutum HOM05D008196 ORTHO05D010261 8.5e-50 201.8 350 40.3
Gorai.009G412100 Gossypium raimondii HOM05D008196 ORTHO05D010261 5.5e-49 199.1 350 40.0
HanXRQChr13g0400671 Helianthus annuus HOM05D008196 ORTHO05D010261 3.6e-48 196.4 333 38.1
Nn3g19096 Nelumbo nucifera HOM05D008196 ORTHO05D010261 4.4e-46 189.5 357 40.6
QL07p041760 Quercus lobata HOM05D008196 ORTHO05D010261 2.4e-44 183.7 159 60.4
CDE06G1684 Ceratophyllum demersum HOM05D008196 ORTHO05D010261 4.5e-43 179.5 190 50.0
CDE03G0205 Ceratophyllum demersum HOM05D008196 ORTHO05D010261 1.3e-42 177.9 189 49.2
Thecc.05G073000 Theobroma cacao HOM05D008196 ORTHO05D010261 2.2e-42 177.2 343 37.6
COL.COLO4_26896 Corchorus olitorius HOM05D008196 ORTHO05D011585 8.8e-39 165.2 338 35.8
PSO339G1434 Papaver somniferum HOM05D008196 ORTHO05D010261 1.7e-37 161.0 323 36.8
CSS0006202 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 3.3e-33 146.7 75 98.7
QL07p041763 Quercus lobata HOM05D008196 ORTHO05D010261 1.3e-29 134.8 183 45.9
Manes.09G049502 Manihot esculenta HOM05D008196 ORTHO05D010261 3.9e-26 123.2 103 54.4
CANSAT80G2595 Cannabis sativa HOM05D008196 ORTHO05D010261 9.5e-25 118.6 340 31.2
Pp3c2_36970 Physcomitrium patens HOM05D008196 ORTHO05D010261 1.0e-23 115.2 179 37.4
Pp3c2_36980 Physcomitrium patens HOM05D008196 ORTHO05D010261 1.0e-23 115.2 179 37.4
HPP92_014786 Vanilla planifolia HOM05D008196 ORTHO05D010261 7.5e-22 109.0 318 29.9
SMO367G1035 Selaginella moellendorffii HOM05D008196 ORTHO05D010261 2.2e-21 107.5 175 40.0
Pp3c1_4500 Physcomitrium patens HOM05D008196 ORTHO05D010261 4.9e-21 106.3 181 37.6
CSS0003728 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 8.3e-21 105.5 50 98.0
AagrBONN_evm.TU.Sc2ySwM_344.3461 Anthoceros agrestis HOM05D008196 ORTHO05D010261 2.3e-18 97.4 207 34.3
SEGI_22377 Sequoiadendron giganteum HOM05D008196 ORTHO05D010261 2.1e-16 90.9 258 30.2
Mapoly0028s0074 Marchantia polymorpha HOM05D008196 ORTHO05D010261 2.8e-16 90.5 199 34.2
ClCG10G019830 Citrullus lanatus HOM05D022817 ORTHO05D010261 6.2e-16 89.4 335 30.4
PGR142G2786 Punica granatum HOM05D008196 ORTHO05D010261 8.9e-15 85.5 325 26.5
Sed0000391 Sechium edule HOM05D022817 ORTHO05D010261 3.4e-14 83.6 119 48.7
Sed0013835 Sechium edule HOM05D022817 ORTHO05D010261 5.8e-14 82.8 339 29.5
ECA233G4339 Erigeron canadensis HOM05D005316 ORTHO05D006495 9.8e-14 82.0 84 54.8
MELO3C009385.2 Cucumis melo HOM05D022817 ORTHO05D010261 2.9e-13 80.5 119 47.9
CsaV3_3G036270 Cucumis sativus L. HOM05D022817 ORTHO05D010261 2.9e-13 80.5 119 47.9
Hund16860 Selenicereus undatus HOM05D008012 ORTHO05D010154 1.9e-12 77.8 203 31.0
ATR0665G245 Amborella trichopoda HOM05D008012 ORTHO05D010154 1.7e-10 71.2 184 28.3
EL10Ac1g01062 Beta vulgaris HOM05D008012 ORTHO05D010154 1.7e-10 71.2 213 26.3
DCAR_027433 Daucus carota HOM05D008196 ORTHO05D010261 5.1e-10 69.7 48 64.6
DCAR_031984 Daucus carota HOM05D008196 ORTHO05D010261 5.1e-10 69.7 48 64.6
SEGI_09514 Sequoiadendron giganteum HOM05D008012 ORTHO05D010154 1.1e-09 68.6 101 33.7
Sc07g0004750 Simmondsia chinensis HOM05D008196 ORTHO05D010261 1.1e-09 68.6 161 33.5
Aqoxy5G01307 Aquilegia oxysepala HOM05D008012 ORTHO05D010154 5.6e-09 66.2 180 30.6
CDE04G1170 Ceratophyllum demersum HOM05D008012 ORTHO05D010154 7.3e-09 65.9 189 24.9
Glyma.04G091500 Glycine max HOM05D008012 ORTHO05D010154 2.1e-08 64.3 201 26.9
Cpa.g.sc21.9 Carica papaya HOM05D008012 ORTHO05D010154 3.6e-08 63.5 198 26.3
Ciclev10002397m.g Citrus clementina HOM05D008012 ORTHO05D010154 6.2e-08 62.8 192 27.1
Lalb_Chr11g0065041 Lupinus albus HOM05D008012 ORTHO05D010154 8.1e-08 62.4 195 27.2
GSVIVG01009167001 Vitis vinifera HOM05D008012 ORTHO05D010154 1.1e-07 62.0 91 30.8
Cfa021114 Carpinus fangiana HOM05D008196 ORTHO05D010261 1.8e-07 61.2 137 38.7
Lsat_1_v5_gn_6_28640 Lactuca sativa HOM05D003842 ORTHO05D004436 3.1e-07 60.5 179 33.0
MBI19_g13125_MAGBIO Magnolia biondii HOM05D003060 ORTHO05D001716 3.1e-07 60.5 158 26.6
AUR62019041 Chenopodium quinoa HOM05D008012 ORTHO05D010154 4.0e-07 60.1 182 29.7
Eucgr.K02433 Eucalyptus grandis HOM05D008196 ORTHO05D010261 5.2e-07 59.7 83 43.4
MBI02_g32605_MAGBIO Magnolia biondii HOM05D008012 ORTHO05D010154 5.2e-07 59.7 229 24.9
TAR636G0574 Trochodendron aralioides HOM05D003060 ORTHO05D001716 8.9e-07 58.9 91 33.0
Atru.chr2.14 Acer truncatum HOM05D003060 ORTHO05D001716 1.2e-06 58.5 90 35.6
Psat5g046360 Pisum sativum HOM05D008012 ORTHO05D010154 1.2e-06 58.5 192 28.1
CDE08G1209 Ceratophyllum demersum HOM05D003060 ORTHO05D001716 2.0e-06 57.8 130 30.0
Phvul.009G144400 Phaseolus vulgaris HOM05D008012 ORTHO05D010154 5.8e-06 56.2 195 26.7
unitig_749.g13558 Utricularia gibba HOM05D003060 ORTHO05D001716 5.8e-06 56.2 75 33.3
Aqoxy2G03022 Aquilegia oxysepala HOM05D003060 ORTHO05D001716 7.6e-06 55.8 95 26.3
arahy.Tifrunner.gnm1.ann1.LGT5H6 Arachis hypogaea HOM05D003060 ORTHO05D001716 7.6e-06 55.8 91 31.9
arahy.Tifrunner.gnm1.ann1.U2HTAJ Arachis hypogaea HOM05D003060 ORTHO05D001716 7.6e-06 55.8 91 31.9
Peaxi162Scf00037g00924 Petunia axillaris HOM05D003060 ORTHO05D001716 7.6e-06 55.8 91 30.8
Ciclev10000070m.g Citrus clementina HOM05D003060 ORTHO05D001716 9.9e-06 55.5 90 34.4
COL.COLO4_05531 Corchorus olitorius HOM05D003060 ORTHO05D001716 9.9e-06 55.5 90 33.3
Peaxi162Scf00689g10024 Petunia axillaris HOM05D000855 ORTHO05D008469 9.9e-06 55.5 92 35.9


User provided reference genes

Program Settings