Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018503 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 3.9e-88 328.2 173 100.0
CSS0004948 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 8.6e-88 327.0 173 99.4
Dinv33186 Davidia involucrata HOM05D006579 ORTHO05D007783 4.0e-77 291.6 173 86.7
Hma1.2p1_1372F.1_g278650 Hydrangea macrophylla HOM05D006579 ORTHO05D007783 2.9e-75 285.4 173 85.0
Ciclev10021552m.g Citrus clementina HOM05D006579 ORTHO05D007783 1.1e-74 283.5 173 84.4
Rhsim01G0001200 Rhododendron simsii HOM05D006579 ORTHO05D007783 1.4e-74 283.1 173 85.0
Sabra14G0081200 Salix brachista HOM05D006579 ORTHO05D007783 2.7e-73 278.9 174 84.5
CAN.G179.22 Capsicum annuum HOM05D006579 ORTHO05D007783 3.0e-72 275.4 173 82.7
Nitab4.5_0001628g0050 Nicotiana tabacum HOM05D006579 ORTHO05D007783 3.0e-72 275.4 173 81.5
Solyc01g068580.4 Solanum lycopersicum HOM05D006579 ORTHO05D007783 5.1e-72 274.6 173 82.1
Sopen01g030530 Solanum pennellii HOM05D006579 ORTHO05D007783 5.1e-72 274.6 173 82.1
Potri.014G110200 Populus trichocarpa HOM05D006579 ORTHO05D007783 6.6e-72 274.2 174 83.3
Peaxi162Scf00309g00059 Petunia axillaris HOM05D006579 ORTHO05D007783 1.1e-71 273.5 173 81.5
Thecc.01G328000 Theobroma cacao HOM05D006579 ORTHO05D007783 1.5e-71 273.1 173 82.1
Nitab4.5_0002103g0080 Nicotiana tabacum HOM05D006579 ORTHO05D007783 9.6e-71 270.4 173 80.3
ClCG01G007260 Citrullus lanatus HOM05D006579 ORTHO05D007783 1.3e-70 270.0 173 80.3
Manes.14G164500 Manihot esculenta HOM05D006579 ORTHO05D007783 1.6e-70 269.6 173 81.5
Gohir.D11G111000 Gossypium hirsutum HOM05D006579 ORTHO05D007783 2.8e-70 268.9 173 80.3
GSVIVG01028219001 Vitis vinifera HOM05D006579 ORTHO05D007783 2.8e-70 268.9 173 79.2
DCAR_018237 Daucus carota HOM05D006579 ORTHO05D007783 3.6e-70 268.5 171 81.9
Gorai.007G118800 Gossypium raimondii HOM05D006579 ORTHO05D007783 4.8e-70 268.1 173 80.3
MD17G1285900 Malus domestica HOM05D006579 ORTHO05D007783 4.8e-70 268.1 173 79.8
Phvul.007G207700 Phaseolus vulgaris HOM05D006579 ORTHO05D007783 4.8e-70 268.1 175 81.1
Cc06_g22680 Coffea canephora HOM05D006579 ORTHO05D007783 1.1e-69 266.9 173 79.2
MELO3C005183.2 Cucumis melo HOM05D006579 ORTHO05D007783 1.4e-69 266.5 173 79.2
Prupe.3G000500 Prunus persica HOM05D006579 ORTHO05D007783 1.4e-69 266.5 173 78.6
Glyma.02G006400 Glycine max HOM05D006579 ORTHO05D007783 1.8e-69 266.2 175 80.6
Cfa004929 Carpinus fangiana HOM05D006579 ORTHO05D007783 2.4e-69 265.8 173 78.0
Duzib138G1509 Durio zibethinus HOM05D006579 ORTHO05D007783 2.4e-69 265.8 173 80.3
Lj5g0006855 Lotus japonicus HOM05D006579 ORTHO05D007783 3.1e-69 265.4 176 80.7
Nn8g39570 Nelumbo nucifera HOM05D006579 ORTHO05D007783 4.0e-69 265.0 174 79.9
Oeu038082.1 Olea europaea HOM05D006579 ORTHO05D007783 5.3e-69 264.6 173 78.6
Atru.chr5.832 Acer truncatum HOM05D006579 ORTHO05D007783 6.9e-69 264.2 174 79.9
Aqoxy2G02395 Aquilegia oxysepala HOM05D006579 ORTHO05D007783 6.9e-69 264.2 174 79.3
arahy.Tifrunner.gnm1.ann1.3317JQ Arachis hypogaea HOM05D006579 ORTHO05D007783 6.9e-69 264.2 175 80.6
CsaV3_5G018690 Cucumis sativus L. HOM05D006579 ORTHO05D007783 6.9e-69 264.2 173 78.6
Sed0009510 Sechium edule HOM05D006579 ORTHO05D007783 6.9e-69 264.2 173 79.2
Glyma.10G140000 Glycine max HOM05D006579 ORTHO05D007783 9.0e-69 263.8 175 80.0
QL09p037462 Quercus lobata HOM05D006579 ORTHO05D007783 9.0e-69 263.8 172 77.9
COL.COLO4_23096 Corchorus olitorius HOM05D006579 ORTHO05D007783 1.2e-68 263.5 173 79.8
arahy.Tifrunner.gnm1.ann1.E1WP71 Arachis hypogaea HOM05D006579 ORTHO05D007783 1.5e-68 263.1 175 80.0
CANSAT25G2874 Cannabis sativa HOM05D006579 ORTHO05D007783 1.5e-68 263.1 174 79.3
VMungo0720G0607 Vigna mungo HOM05D006579 ORTHO05D007783 4.5e-68 261.5 175 79.4
Gohir.A11G106100 Gossypium hirsutum HOM05D006579 ORTHO05D007783 5.8e-68 261.2 173 79.2
Lalb_Chr06g0167181 Lupinus albus HOM05D006579 ORTHO05D007783 7.6e-68 260.8 175 79.4
Ca_10226_v3 Cicer arietinum L. HOM05D006579 ORTHO05D007783 9.9e-68 260.4 173 78.0
SalBow3G0048 Salvia bowleyana HOM05D006579 ORTHO05D007783 9.9e-68 260.4 173 76.9
Lalb_Chr21g0309921 Lupinus albus HOM05D006579 ORTHO05D007783 2.9e-67 258.8 175 78.9
MBI15_g35678_MAGBIO Magnolia biondii HOM05D006579 ORTHO05D007783 4.9e-67 258.1 175 80.0
HanXRQChr01g0017841 Helianthus annuus HOM05D006579 ORTHO05D007783 1.4e-66 256.5 182 74.2
CiPaw.07G127500 Carya illinoinensis HOM05D006579 ORTHO05D007783 1.9e-66 256.1 173 76.9
Eucgr.A00989 Eucalyptus grandis HOM05D006579 ORTHO05D007783 1.9e-66 256.1 168 77.4
TAR362G0572 Trochodendron aralioides HOM05D006579 ORTHO05D007783 2.4e-66 255.8 174 78.2
TPR.G3075 Trifolium pratense HOM05D006579 ORTHO05D007783 9.3e-66 253.8 174 76.4
TWI23G0058 Tripterygium wilfordii HOM05D006579 ORTHO05D007783 9.3e-66 253.8 173 77.5
ATR0796G267 Amborella trichopoda HOM05D006579 ORTHO05D007783 2.7e-65 252.3 174 77.0
Psat6g157680 Pisum sativum HOM05D006579 ORTHO05D007783 2.7e-65 252.3 174 75.9
Hund07814 Selenicereus undatus HOM05D006579 ORTHO05D007783 3.5e-65 251.9 173 76.3
PGSC0003DMG400000840 Solanum tuberosum HOM05D006579 ORTHO05D007783 3.5e-65 251.9 211 66.8
PGR042G1939 Punica granatum HOM05D006579 ORTHO05D007783 4.6e-65 251.5 173 72.8
THA.LOC104825921 Tarenaya hassleriana HOM05D006579 ORTHO05D007783 6.0e-65 251.1 177 76.8
RcHm_v2.0_Chr3g0485501 Rosa chinensis HOM05D006579 ORTHO05D007783 1.3e-64 250.0 173 73.4
CARHR001640 Cardamine hirsuta HOM05D006579 ORTHO05D007783 2.3e-64 249.2 178 74.2
EL10Ac9g20927 Beta vulgaris HOM05D006579 ORTHO05D007783 3.0e-64 248.8 173 74.6
PSO210G5405 Papaver somniferum HOM05D006579 ORTHO05D007783 3.0e-64 248.8 174 73.6
PSO761G0510 Papaver somniferum HOM05D006579 ORTHO05D007783 3.0e-64 248.8 174 73.6
Carub.0001s0137 Capsella rubella HOM05D006579 ORTHO05D007783 6.7e-64 247.7 178 74.2
Medtr1g085470 Medicago truncatula HOM05D006579 ORTHO05D007783 8.7e-64 247.3 174 74.7
Thhalv10008452m.g Eutrema salsugineum HOM05D006579 ORTHO05D007783 1.9e-63 246.1 176 73.3
Aa31LG1G10170 Aethionema arabicum HOM05D006579 ORTHO05D007783 2.5e-63 245.7 173 73.4
AL1G11660 Arabidopsis lyrata HOM05D006579 ORTHO05D007783 2.5e-63 245.7 178 74.2
AT1G02330 Arabidopsis thaliana HOM05D006579 ORTHO05D007783 3.3e-63 245.4 179 73.2
BcaC05g24612 Brassica carinata HOM05D006579 ORTHO05D007783 4.3e-63 245.0 176 73.3
C05p01100 Brassica napus HOM05D006579 ORTHO05D007783 4.3e-63 245.0 176 73.3
ECA248G0873 Erigeron canadensis HOM05D006579 ORTHO05D007783 4.3e-63 245.0 180 72.8
FvH4_1g26040 Fragaria vesca HOM05D006579 ORTHO05D007783 7.4e-63 244.2 174 73.0
FAN19G0998 Fragaria x ananassa HOM05D006579 ORTHO05D007783 7.4e-63 244.2 174 73.0
Sp1g01410 Schrenkiella parvula HOM05D006579 ORTHO05D007783 9.6e-63 243.8 177 72.3
BolC5t28891H Brassica oleracea HOM05D006579 ORTHO05D007783 1.6e-62 243.0 176 72.7
FAN28G1483 Fragaria x ananassa HOM05D006579 ORTHO05D007783 2.1e-62 242.7 174 73.0
BraA10t42384Z Brassica rapa HOM05D006579 ORTHO05D007783 4.8e-62 241.5 176 72.2
Migut.D00005 Erythranthe guttata HOM05D006579 ORTHO05D007783 6.9e-61 237.7 178 71.9
FAN23G1885 Fragaria x ananassa HOM05D006579 ORTHO05D007783 9.0e-61 237.3 178 71.3
FAN23G2819 Fragaria x ananassa HOM05D006579 ORTHO05D007783 9.0e-61 237.3 178 71.3
MSTRG.18055 Avicennia marina HOM05D006579 ORTHO05D007783 1.7e-59 233.0 171 73.1
AUR62037602 Chenopodium quinoa HOM05D006579 ORTHO05D007783 3.8e-59 231.9 173 70.5
Cpa.g.sc57.48 Carica papaya HOM05D006579 ORTHO05D007783 1.4e-58 229.9 174 73.6
HPP92_026046 Vanilla planifolia HOM05D006579 ORTHO05D007783 1.9e-58 229.6 174 72.4
FAN26G1368 Fragaria x ananassa HOM05D006579 ORTHO05D007783 2.5e-58 229.2 203 62.6
Lsat_1_v5_gn_1_78561 Lactuca sativa HOM05D006579 ORTHO05D007783 3.5e-57 225.3 169 71.6
vmacro02350 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 3.0e-56 222.2 133 86.5
Sc12g0008270 Simmondsia chinensis HOM05D006579 ORTHO05D007783 6.7e-56 221.1 173 68.2
Mapoly0012s0210 Marchantia polymorpha HOM05D006579 ORTHO05D007783 8.2e-54 214.2 182 69.2
SGA_v2.0_scaffold417G51243 Striga asiatica HOM05D006579 ORTHO05D007783 8.2e-54 214.2 204 61.8
Pp3c6_17910 Physcomitrium patens HOM05D006579 ORTHO05D007783 6.9e-53 211.1 177 67.8
Actinidia21333 Actinidia chinensis HOM05D006579 ORTHO05D007783 9.0e-53 210.7 158 72.8
Os03g0374100 Oryza sativa ssp. japonica HOM05D006579 ORTHO05D007783 5.8e-52 208.0 179 63.7
Zm00001eb018120 Zea mays HOM05D006579 ORTHO05D007783 2.3e-48 196.1 180 62.2
Lju2566A1G36 Lonicera japonica HOM05D006579 ORTHO05D007783 1.5e-47 193.4 158 68.4
Pp3c5_5390 Physcomitrium patens HOM05D006579 ORTHO05D007783 1.5e-47 193.4 179 64.2
AagrBONN_evm.TU.Sc2ySwM_117.1030 Anthoceros agrestis HOM05D006579 ORTHO05D007783 2.5e-47 192.6 179 63.1
Ah.01g015750 Amaranthus hybridus HOM05D006579 ORTHO05D007783 3.4e-44 182.2 298 42.6
HanXRQChr09g0263751 Helianthus annuus HOM05D006579 ORTHO05D007783 4.5e-44 181.8 181 59.1
SHI19775 Sapria himalayana HOM05D006579 ORTHO05D007783 6.7e-40 167.9 179 56.4
SEGI_25815 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 6.7e-40 167.9 132 70.5
unitig_747.g21528 Utricularia gibba HOM05D006579 ORTHO05D007783 1.1e-37 160.6 175 57.7
CBR_g3462 Chara braunii HOM05D006579 ORTHO05D007783 2.9e-35 152.5 123 63.4
Cc00_g21250 Coffea canephora HOM05D006579 ORTHO05D007783 3.5e-28 129.0 77 84.4
HPP92_013492 Vanilla planifolia HOM05D006579 ORTHO05D007783 2.7e-17 92.8 66 74.2
SMO367G0899 Selaginella moellendorffii HOM05D006579 ORTHO05D007783 9.8e-15 84.3 66 68.2
MCO04G420 Micromonas commoda HOM05D006579 ORTHO05D007783 3.5e-12 75.9 108 42.6
Lju2566A1T41 Lonicera japonica HOM05D006579 ORTHO05D007783 5.9e-12 75.1 42 83.3
Haze_05169 Corylus avellana HOM05D006579 ORTHO05D007783 6.1e-09 65.1 42 71.4
BcaB03g13515 Brassica carinata HOM05D006579 ORTHO05D007783 8.8e-08 61.2 72 52.8


User provided reference genes

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