Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018490 Camellia sinensis var. sinensis HOM05D007348 ORTHO05D009257 2.3e-70 268.9 140 100.0
Dinv37151 Davidia involucrata HOM05D007348 ORTHO05D009257 6.8e-51 204.1 143 78.3
Actinidia11269 Actinidia chinensis HOM05D007348 ORTHO05D009257 1.9e-45 186.0 141 73.8
Potri.006G087701 Populus trichocarpa HOM05D007348 ORTHO05D009257 2.4e-43 179.1 141 70.2
CiPaw.09G195200 Carya illinoinensis HOM05D007348 ORTHO05D009257 3.1e-43 178.7 143 68.5
CANSAT35G0511 Cannabis sativa HOM05D007348 ORTHO05D009257 4.0e-43 178.3 140 69.3
Cc06_g02390 Coffea canephora HOM05D007348 ORTHO05D009257 5.2e-43 177.9 144 69.4
Cfa017345 Carpinus fangiana HOM05D007348 ORTHO05D009257 8.9e-43 177.2 142 67.6
vmacro20175 Vaccinium macrocarpon HOM05D007348 ORTHO05D009257 8.9e-43 177.2 143 72.0
TAR636G0176 Trochodendron aralioides HOM05D007348 ORTHO05D009257 2.0e-42 176.0 142 71.8
TWI77G0545 Tripterygium wilfordii HOM05D007348 ORTHO05D009257 4.4e-42 174.9 140 69.3
TAR636G2125 Trochodendron aralioides HOM05D007348 ORTHO05D009257 4.4e-42 174.9 142 71.8
QL07p048913 Quercus lobata HOM05D007348 ORTHO05D009257 7.6e-42 174.1 140 68.6
COL.COLO4_14769 Corchorus olitorius HOM05D007348 ORTHO05D009257 1.7e-41 172.9 141 70.9
GSVIVG01034135001 Vitis vinifera HOM05D007348 ORTHO05D009257 6.4e-41 171.0 140 68.6
Sabra06G0067000 Salix brachista HOM05D007348 ORTHO05D009257 8.4e-41 170.6 141 68.1
LjContig00141g0000939 Lotus japonicus HOM05D007348 ORTHO05D009257 1.4e-40 169.9 94 89.4
Prupe.6G258300 Prunus persica HOM05D007348 ORTHO05D009257 1.4e-40 169.9 139 68.3
Ciclev10013090m.g Citrus clementina HOM05D007348 ORTHO05D009257 4.2e-40 168.3 142 66.2
Peaxi162Scf00330g00089 Petunia axillaris HOM05D007348 ORTHO05D009257 4.2e-40 168.3 141 66.0
RcHm_v2.0_Chr3g0466241 Rosa chinensis HOM05D007348 ORTHO05D009257 4.2e-40 168.3 140 67.9
Thecc.05G036200 Theobroma cacao HOM05D007348 ORTHO05D009257 4.2e-40 168.3 141 66.0
CsaV3_3G034760 Cucumis sativus L. HOM05D007348 ORTHO05D009257 5.4e-40 167.9 140 65.7
Gorai.006G171200 Gossypium raimondii HOM05D007348 ORTHO05D009257 7.1e-40 167.5 139 68.3
FAN05G4426 Fragaria x ananassa HOM05D007348 ORTHO05D009257 9.3e-40 167.2 109 79.8
Oeu006894.1 Olea europaea HOM05D007348 ORTHO05D009257 9.3e-40 167.2 140 69.3
MELO3C009245.2 Cucumis melo HOM05D007348 ORTHO05D009257 1.6e-39 166.4 140 65.0
FvH4_6g13360 Fragaria vesca HOM05D007348 ORTHO05D009257 3.5e-39 165.2 140 68.6
FAN14G5390 Fragaria x ananassa HOM05D007348 ORTHO05D009257 3.5e-39 165.2 140 68.6
Gohir.D09G150000 Gossypium hirsutum HOM05D007348 ORTHO05D009257 4.6e-39 164.9 139 67.6
ClCG10G021280 Citrullus lanatus HOM05D007348 ORTHO05D009257 6.0e-39 164.5 140 65.0
Gohir.A09G154300 Gossypium hirsutum HOM05D007348 ORTHO05D009257 7.8e-39 164.1 139 62.6
Haze_20824 Corylus avellana HOM05D007348 ORTHO05D009257 1.3e-38 163.3 159 59.1
Migut.L01962 Erythranthe guttata HOM05D007348 ORTHO05D009257 1.3e-38 163.3 117 73.5
CAN.G92.20 Capsicum annuum HOM05D007348 ORTHO05D009257 1.7e-38 162.9 109 77.1
Lsat_1_v5_gn_9_32101 Lactuca sativa HOM05D007348 ORTHO05D009257 1.7e-38 162.9 140 65.7
PGSC0003DMG400019150 Solanum tuberosum HOM05D007348 ORTHO05D009257 1.7e-38 162.9 109 73.4
Manes.08G081300 Manihot esculenta HOM05D007348 ORTHO05D009257 2.3e-38 162.5 144 65.3
Nn2g13409 Nelumbo nucifera HOM05D007348 ORTHO05D009257 2.3e-38 162.5 146 66.4
Atru.chr8.2007 Acer truncatum HOM05D007348 ORTHO05D009257 5.1e-38 161.4 117 70.1
Lalb_Chr01g0022591 Lupinus albus HOM05D007348 ORTHO05D009257 5.1e-38 161.4 94 81.9
Glyma.07G134500 Glycine max HOM05D007348 ORTHO05D009257 6.6e-38 161.0 145 63.4
FAN02G3968 Fragaria x ananassa HOM05D007348 ORTHO05D009257 8.7e-38 160.6 97 80.4
FAN09G3409 Fragaria x ananassa HOM05D007348 ORTHO05D009257 8.7e-38 160.6 140 67.1
Ca_25900_v3 Cicer arietinum L. HOM05D007348 ORTHO05D009257 1.9e-37 159.5 110 73.6
Aqoxy1G00895 Aquilegia oxysepala HOM05D007348 ORTHO05D009257 2.5e-37 159.1 140 62.9
ECA247G0870 Erigeron canadensis HOM05D007348 ORTHO05D009257 2.5e-37 159.1 142 62.0
Nitab4.5_0000527g0200 Nicotiana tabacum HOM05D007348 ORTHO05D009257 3.3e-37 158.7 111 72.1
Nitab4.5_0008097g0010 Nicotiana tabacum HOM05D007348 ORTHO05D009257 3.3e-37 158.7 120 67.5
Sed0022418 Sechium edule HOM05D007348 ORTHO05D009257 3.3e-37 158.7 91 85.7
Migut.J00309 Erythranthe guttata HOM05D007348 ORTHO05D009257 4.3e-37 158.3 140 62.9
CDE07G1011 Ceratophyllum demersum HOM05D007348 ORTHO05D009257 5.6e-37 157.9 94 80.9
Eucgr.K03108 Eucalyptus grandis HOM05D007348 ORTHO05D009257 7.3e-37 157.5 118 70.3
ATR0559G267 Amborella trichopoda HOM05D007348 ORTHO05D009257 1.6e-36 156.4 89 86.5
CDE04G2102 Ceratophyllum demersum HOM05D000082 ORTHO05D001639 1.6e-36 156.4 140 59.3
MD12G1144800 Malus domestica HOM05D007348 ORTHO05D009257 1.6e-36 156.4 139 60.4
Glyma.18G184000 Glycine max HOM05D007348 ORTHO05D009257 2.1e-36 156.0 140 60.7
SGA_v2.0_scaffold94G28573 Striga asiatica HOM05D007348 ORTHO05D009257 3.6e-36 155.2 140 66.4
VMungo1383G1736 Vigna mungo HOM05D007348 ORTHO05D009257 3.6e-36 155.2 95 83.2
arahy.Tifrunner.gnm1.ann1.IF8W7F Arachis hypogaea HOM05D007348 ORTHO05D009257 6.2e-36 154.5 142 60.6
Phvul.008G118700 Phaseolus vulgaris HOM05D007348 ORTHO05D009257 6.2e-36 154.5 140 62.9
Sopen10g035960 Solanum pennellii HOM05D007348 ORTHO05D009257 1.1e-35 153.7 109 70.6
arahy.Tifrunner.gnm1.ann1.HF038C Arachis hypogaea HOM05D007348 ORTHO05D009257 1.4e-35 153.3 142 59.9
Cpa.g.sc169.14 Carica papaya HOM05D007348 ORTHO05D009257 1.4e-35 153.3 137 63.5
Medtr7g062470 Medicago truncatula HOM05D007348 ORTHO05D009257 1.4e-35 153.3 84 85.7
PGR004G1504 Punica granatum HOM05D007348 ORTHO05D009257 1.8e-35 152.9 140 60.7
MD04G1131700 Malus domestica HOM05D007348 ORTHO05D009257 2.4e-35 152.5 139 59.7
Solyc10g086570.3 Solanum lycopersicum HOM05D007348 ORTHO05D009257 2.4e-35 152.5 110 71.8
unitig_21.g21015 Utricularia gibba HOM05D007348 ORTHO05D009257 4.0e-35 151.8 100 74.0
HanXRQChr10g0298181 Helianthus annuus HOM05D007348 ORTHO05D009257 5.3e-35 151.4 142 62.0
THA.LOC104816258 Tarenaya hassleriana HOM05D007348 ORTHO05D009257 5.3e-35 151.4 112 70.5
C09p74340 Brassica napus HOM05D007348 ORTHO05D009257 6.9e-35 151.0 142 60.6
BolC9t60168H Brassica oleracea HOM05D007348 ORTHO05D009257 6.9e-35 151.0 142 60.6
Psat3g137840 Pisum sativum HOM05D007348 ORTHO05D009257 1.5e-34 149.8 110 65.5
Hund09099 Selenicereus undatus HOM05D007348 ORTHO05D009257 1.5e-34 149.8 92 79.3
MBI14_g08036_MAGBIO Magnolia biondii HOM05D007348 ORTHO05D009257 2.0e-34 149.4 89 82.0
AT5G02160 Arabidopsis thaliana HOM05D007348 ORTHO05D009257 2.6e-34 149.1 118 66.1
SEGI_32371 Sequoiadendron giganteum HOM05D007348 ORTHO05D009257 3.4e-34 148.7 94 78.7
A10p33440 Brassica napus HOM05D007348 ORTHO05D009257 5.8e-34 147.9 142 60.6
BraA10t45374Z Brassica rapa HOM05D007348 ORTHO05D009257 5.8e-34 147.9 142 60.6
PSO339G0488 Papaver somniferum HOM05D007348 ORTHO05D009257 5.8e-34 147.9 95 72.6
Sc01g0004470 Simmondsia chinensis HOM05D007348 ORTHO05D009257 7.6e-34 147.5 101 74.3
Zm00001eb355890 Zea mays HOM05D007348 ORTHO05D009257 7.6e-34 147.5 87 81.6
Duzib106G1977 Durio zibethinus HOM05D007348 ORTHO05D009257 9.9e-34 147.1 130 64.6
Ah.12g059960 Amaranthus hybridus HOM05D007348 ORTHO05D009257 1.3e-33 146.7 91 78.0
Sp6g40280 Schrenkiella parvula HOM05D007348 ORTHO05D009257 1.3e-33 146.7 109 68.8
Aa31LG1G22570 Aethionema arabicum HOM05D007348 ORTHO05D009257 1.7e-33 146.4 143 60.8
AL6G11390 Arabidopsis lyrata HOM05D007348 ORTHO05D009257 2.9e-33 145.6 82 85.4
PSO063G2704 Papaver somniferum HOM05D007348 ORTHO05D009257 4.9e-33 144.8 94 72.3
AUR62042385 Chenopodium quinoa HOM05D007348 ORTHO05D009257 6.4e-33 144.4 92 73.9
Thhalv10014990m.g Eutrema salsugineum HOM05D007348 ORTHO05D009257 6.4e-33 144.4 83 84.3
Carub.0006s0100 Capsella rubella HOM05D007348 ORTHO05D009257 1.9e-32 142.9 82 82.9
EL10As1g23094 Beta vulgaris HOM05D007348 ORTHO05D009257 2.4e-32 142.5 146 57.5
Duzib093G0801 Durio zibethinus HOM05D007348 ORTHO05D009257 1.6e-31 139.8 95 74.7
Pp3c3_5420 Physcomitrium patens HOM05D007348 ORTHO05D009257 2.1e-31 139.4 84 77.4
Os05g0110100 Oryza sativa ssp. japonica HOM05D007348 ORTHO05D009257 2.7e-31 139.0 115 64.3
HPP92_026789 Vanilla planifolia HOM05D007348 ORTHO05D009257 6.0e-31 137.9 84 81.0
Pp3c13_7350 Physcomitrium patens HOM05D007348 ORTHO05D009257 7.9e-31 137.5 139 58.3
Mapoly0046s0114 Marchantia polymorpha HOM05D007348 ORTHO05D009257 3.0e-30 135.6 111 66.7
SMO174G0219 Selaginella moellendorffii HOM05D007348 ORTHO05D009257 1.1e-29 133.7 86 73.3
CARHR211200 Cardamine hirsuta HOM05D007348 ORTHO05D009257 2.5e-29 132.5 142 57.0
CBR_g52180 Chara braunii HOM05D007348 ORTHO05D009257 9.9e-26 120.6 89 67.4
CANSAT35G1486 Cannabis sativa HOM05D007348 ORTHO05D009257 2.9e-25 119.0 106 63.2
TPR.G27019 Trifolium pratense HOM05D007348 ORTHO05D009257 7.6e-18 94.4 46 91.3
HPP92_000744 Vanilla planifolia HOM05D007348 ORTHO05D009257 1.2e-15 87.0 84 57.1
TPR.G1710 Trifolium pratense HOM05D007348 ORTHO05D009257 1.0e-09 67.4 65 56.9
AagrBONN_evm.TU.Sc2ySwM_117.386 Anthoceros agrestis HOM05D007348 ORTHO05D009257 7.2e-08 61.2 39 79.5


User provided reference genes

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