Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018488 Camellia sinensis var. sinensis HOM05D000473 ORTHO05D001219 9.7e-58 227.3 181 100.0
CSS0047326 Camellia sinensis var. sinensis HOM05D000473 ORTHO05D001219 1.1e-53 213.8 181 96.7
Actinidia28905 Actinidia chinensis HOM05D000473 ORTHO05D001219 9.5e-29 131.0 183 70.5
Rhsim03G0091900 Rhododendron simsii HOM05D000473 ORTHO05D001219 2.6e-26 122.9 212 61.3
Actinidia08774 Actinidia chinensis HOM05D000473 ORTHO05D001219 5.1e-22 108.6 182 66.5
Oeu016984.1 Olea europaea HOM05D000473 ORTHO05D001219 9.5e-21 104.4 182 39.6
Dinv37317 Davidia involucrata HOM05D000473 ORTHO05D001219 5.2e-19 98.6 182 57.7
Actinidia28214 Actinidia chinensis HOM05D000473 ORTHO05D001219 8.3e-17 91.3 216 54.2
Rhsim04G0144200 Rhododendron simsii HOM05D000473 ORTHO05D001219 8.3e-17 91.3 189 53.4
MSTRG.5762 Avicennia marina HOM05D000473 ORTHO05D001219 3.2e-16 89.4 189 41.3
Nitab4.5_0003524g0040 Nicotiana tabacum HOM05D000473 ORTHO05D001219 5.4e-16 88.6 181 37.0
Peaxi162Scf00638g00210 Petunia axillaris HOM05D000473 ORTHO05D001219 7.1e-16 88.2 195 44.1
CSS0017161 Camellia sinensis var. sinensis HOM05D000473 ORTHO05D001219 2.7e-15 86.3 186 54.8
Nitab4.5_0008928g0030 Nicotiana tabacum HOM05D000473 ORTHO05D001219 2.7e-15 86.3 182 49.5
Nitab4.5_0017306g0010 Nicotiana tabacum HOM05D000473 ORTHO05D001219 3.0e-14 82.8 181 44.8
Oeu061953.1 Olea europaea HOM05D000473 ORTHO05D001219 3.0e-14 82.8 182 40.7
Peaxi162Scf00311g01111 Petunia axillaris HOM05D000473 ORTHO05D001219 3.0e-14 82.8 184 36.4
Lj3C985T0 Lonicera japonica HOM05D000473 ORTHO05D001219 6.6e-14 81.6 181 46.4
vmacro08781 Vaccinium macrocarpon HOM05D000473 ORTHO05D001219 8.6e-14 81.3 194 50.5
Peaxi162Scf00488g00011 Petunia axillaris HOM05D000473 ORTHO05D001219 3.3e-13 79.3 186 35.5
Nitab4.5_0000578g0170 Nicotiana tabacum HOM05D000473 ORTHO05D001219 4.3e-13 79.0 182 51.1
Lj2A121T43 Lonicera japonica HOM05D000473 ORTHO05D001219 7.3e-13 78.2 184 51.1
Sopen09g003000 Solanum pennellii HOM05D000473 ORTHO05D001219 9.6e-13 77.8 204 40.2
Lsat_1_v5_gn_1_52240 Lactuca sativa HOM05D000473 ORTHO05D001219 3.6e-12 75.9 198 40.4
Sopen10g035670 Solanum pennellii HOM05D000473 ORTHO05D001219 8.1e-12 74.7 181 44.8
Peaxi162Scf00488g00003 Petunia axillaris HOM05D000473 ORTHO05D001219 4.0e-11 72.4 182 41.2
Sc02g0001600 Simmondsia chinensis HOM05D000473 ORTHO05D001219 5.2e-11 72.0 183 47.5
CAN.G900.31 Capsicum annuum HOM05D000473 ORTHO05D001219 6.8e-11 71.6 192 32.8
SGA_v2.0_scaffold75G24847 Striga asiatica HOM05D000473 ORTHO05D001219 1.2e-10 70.9 192 33.9
GSVIVG01025734001 Vitis vinifera HOM05D000473 ORTHO05D001219 5.8e-10 68.6 188 51.1
PGSC0003DMG400003887 Solanum tuberosum HOM05D000473 ORTHO05D001219 9.9e-10 67.8 193 42.5
Solyc10g086280.2 Solanum lycopersicum HOM05D000473 ORTHO05D001219 1.3e-09 67.4 181 46.4
CAN.G501.1 Capsicum annuum HOM05D000473 ORTHO05D001219 1.7e-09 67.0 181 39.8
Solyc09g008200.4 Solanum lycopersicum HOM05D000473 ORTHO05D001219 2.2e-09 66.6 198 40.9
TWI74G0056 Tripterygium wilfordii HOM05D000473 ORTHO05D001219 3.8e-09 65.9 194 41.8
vmacro07291 Vaccinium macrocarpon HOM05D000473 ORTHO05D001219 3.8e-09 65.9 208 54.8
HanXRQChr14g0454431 Helianthus annuus HOM05D000473 ORTHO05D001219 4.9e-09 65.5 183 34.4
Gohir.D09G142200 Gossypium hirsutum HOM05D000473 ORTHO05D001219 6.4e-09 65.1 205 42.0
CANSAT80G2299 Cannabis sativa HOM05D000473 ORTHO05D001219 8.4e-09 64.7 195 33.8
Sc07g0004740 Simmondsia chinensis HOM05D000473 ORTHO05D001219 8.4e-09 64.7 181 30.9
DCAR_014996 Daucus carota HOM05D000473 ORTHO05D001219 1.4e-08 63.9 198 41.4
DCAR_017683 Daucus carota HOM05D000473 ORTHO05D001219 1.9e-08 63.5 183 49.7
MSTRG.19180 Avicennia marina HOM05D000473 ORTHO05D001219 3.2e-08 62.8 188 43.6
Sabra06G0098500 Salix brachista HOM05D000473 ORTHO05D001219 3.2e-08 62.8 181 40.3
Migut.J00656 Erythranthe guttata HOM05D000473 ORTHO05D001219 4.2e-08 62.4 185 44.3
PGR004G2118 Punica granatum HOM05D000473 ORTHO05D001219 9.3e-08 61.2 201 41.3
AUR62040343 Chenopodium quinoa HOM05D000473 ORTHO05D001219 1.6e-07 60.5 193 33.7
Duzib128G1412 Durio zibethinus HOM05D000473 ORTHO05D001219 1.6e-07 60.5 203 38.9
Nitab4.5_0000063g0110 Nicotiana tabacum HOM05D000473 ORTHO05D001219 1.6e-07 60.5 185 31.4
PGR004G0940 Punica granatum HOM05D000473 ORTHO05D001219 1.6e-07 60.5 182 45.6
Gohir.A09G146500 Gossypium hirsutum HOM05D000473 ORTHO05D001219 2.1e-07 60.1 206 42.7
AUR62042507 Chenopodium quinoa HOM05D000473 ORTHO05D001219 2.7e-07 59.7 190 42.6
AUR62044556 Chenopodium quinoa HOM05D000473 ORTHO05D001219 2.7e-07 59.7 190 42.6
BcaB01g05841 Brassica carinata HOM05D000473 ORTHO05D001219 6.0e-07 58.5 215 42.3
BolC3t12703H Brassica oleracea HOM05D000473 ORTHO05D001219 6.0e-07 58.5 215 42.3
SGA_v2.0_scaffold40G15519 Striga asiatica HOM05D000473 ORTHO05D001219 6.0e-07 58.5 183 32.2
MD12G1113000 Malus domestica HOM05D000473 ORTHO05D001219 7.8e-07 58.2 193 38.3
Manes.08G010600 Manihot esculenta HOM05D000473 ORTHO05D001219 7.8e-07 58.2 195 48.2
Cc06_g04230 Coffea canephora HOM05D000473 ORTHO05D001219 1.3e-06 57.4 187 47.6
BcaC06g32055 Brassica carinata HOM05D000473 ORTHO05D001219 2.3e-06 56.6 203 38.4
BolC9t60076H Brassica oleracea HOM05D000473 ORTHO05D001219 2.3e-06 56.6 203 38.4
Dinv35788 Davidia involucrata HOM05D000473 ORTHO05D001219 2.3e-06 56.6 134 51.5
VMungo0720G1284 Vigna mungo HOM05D000473 ORTHO05D001219 2.3e-06 56.6 194 36.1
TWI53G1747 Tripterygium wilfordii HOM05D000473 ORTHO05D001219 3.0e-06 56.2 193 38.3
TPR.G11269 Trifolium pratense HOM05D000473 ORTHO05D001219 3.9e-06 55.8 191 46.1
Gohir.A04G072100 Gossypium hirsutum HOM05D000473 ORTHO05D001219 6.6e-06 55.1 196 41.3
Phvul.001G179100 Phaseolus vulgaris HOM05D000473 ORTHO05D001219 8.7e-06 54.7 190 40.0


User provided reference genes

Program Settings