Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018418 Camellia sinensis var. sinensis HOM05D001343 ORTHO05D002008 5.6e-62 240.7 119 100.0
CSS0040912 Camellia sinensis var. sinensis HOM05D001343 ORTHO05D002008 3.2e-41 171.8 119 76.5
Actinidia29090 Actinidia chinensis HOM05D001343 ORTHO05D002008 6.9e-28 127.5 107 64.5
Nn2g10875 Nelumbo nucifera HOM05D001343 ORTHO05D002008 4.2e-25 118.2 108 60.2
CANSAT35G1611 Cannabis sativa HOM05D001343 ORTHO05D002008 7.2e-25 117.5 108 59.3
TAR633G2261 Trochodendron aralioides HOM05D001343 ORTHO05D002008 7.2e-25 117.5 108 59.3
Aqoxy4G02522 Aquilegia oxysepala HOM05D001343 ORTHO05D002008 1.2e-24 116.7 108 59.3
Thecc.05G013700 Theobroma cacao HOM05D001343 ORTHO05D002008 2.1e-24 115.9 108 58.3
Duzib093G1742 Durio zibethinus HOM05D001343 ORTHO05D002008 3.5e-24 115.2 108 58.3
Dinv09290 Davidia involucrata HOM05D001343 ORTHO05D002008 4.6e-24 114.8 108 58.3
Eucgr.K02976 Eucalyptus grandis HOM05D001343 ORTHO05D002008 6.1e-24 114.4 108 59.3
Cfa017190 Carpinus fangiana HOM05D001343 ORTHO05D002008 1.0e-23 113.6 107 57.0
Haze_21021 Corylus avellana HOM05D001343 ORTHO05D002008 1.0e-23 113.6 107 57.9
QL07p035146 Quercus lobata HOM05D001343 ORTHO05D002008 1.8e-23 112.8 107 58.9
vmacro20291 Vaccinium macrocarpon HOM05D001343 ORTHO05D002008 1.8e-23 112.8 108 58.3
CiPaw.10G157400 Carya illinoinensis HOM05D001343 ORTHO05D002008 3.9e-23 111.7 108 56.5
Ciclev10011419m.g Citrus clementina HOM05D001343 ORTHO05D002008 3.9e-23 111.7 106 56.6
PSO339G0465 Papaver somniferum HOM05D001343 ORTHO05D002008 3.9e-23 111.7 108 57.4
PSO384G0477 Papaver somniferum HOM05D001343 ORTHO05D002008 3.9e-23 111.7 108 57.4
GSVIVG01011177001 Vitis vinifera HOM05D001343 ORTHO05D002008 6.7e-23 110.9 108 57.4
Dinv01496 Davidia involucrata HOM05D001343 ORTHO05D002008 8.7e-23 110.5 108 55.6
EL10Ac5g12545 Beta vulgaris HOM05D001343 ORTHO05D002008 1.1e-22 110.2 108 55.6
Ah.12g058760 Amaranthus hybridus HOM05D001343 ORTHO05D002008 1.9e-22 109.4 118 51.7
AUR62030485 Chenopodium quinoa HOM05D001343 ORTHO05D002008 1.9e-22 109.4 107 55.1
Gohir.A04G092200 Gossypium hirsutum HOM05D001343 ORTHO05D002008 2.5e-22 109.0 108 55.6
Gohir.D04G131400 Gossypium hirsutum HOM05D001343 ORTHO05D002008 2.5e-22 109.0 108 55.6
Gorai.012G115300 Gossypium raimondii HOM05D001343 ORTHO05D002008 2.5e-22 109.0 108 55.6
CSS0004867 Camellia sinensis var. sinensis HOM05D001343 ORTHO05D002008 3.3e-22 108.6 105 59.0
Ca_26615_v3 Cicer arietinum L. HOM05D001343 ORTHO05D002008 3.3e-22 108.6 107 55.1
Oeu038762.1 Olea europaea HOM05D001343 ORTHO05D002008 5.7e-22 107.8 108 53.7
Psat3g128920 Pisum sativum HOM05D001343 ORTHO05D002008 5.7e-22 107.8 108 54.6
COL.COLO4_14511 Corchorus olitorius HOM05D001343 ORTHO05D002008 7.4e-22 107.5 108 55.6
ATR0681G258 Amborella trichopoda HOM05D001343 ORTHO05D002008 9.7e-22 107.1 108 55.6
Migut.J00145 Erythranthe guttata HOM05D001343 ORTHO05D002008 1.3e-21 106.7 108 53.7
Sopen10g028230 Solanum pennellii HOM05D001343 ORTHO05D002008 1.6e-21 106.3 108 54.6
Sc22g0002530 Simmondsia chinensis HOM05D001343 ORTHO05D002008 2.2e-21 105.9 106 52.8
Potri.016G118300 Populus trichocarpa HOM05D001343 ORTHO05D002008 2.8e-21 105.5 108 54.6
Atru.chr8.2264 Acer truncatum HOM05D001343 ORTHO05D002008 6.3e-21 104.4 106 50.9
Cpa.g.sc11.98 Carica papaya HOM05D001343 ORTHO05D002008 6.3e-21 104.4 108 56.5
Glyma.07G151700 Glycine max HOM05D001343 ORTHO05D002008 8.2e-21 104.0 108 51.9
Lj1g0006734 Lotus japonicus HOM05D001343 ORTHO05D002008 8.2e-21 104.0 106 51.9
TWI74G0687 Tripterygium wilfordii HOM05D001343 ORTHO05D002008 8.2e-21 104.0 108 54.6
Medtr7g068890 Medicago truncatula HOM05D001343 ORTHO05D002008 1.1e-20 103.6 108 52.8
Solyc10g076590.3 Solanum lycopersicum HOM05D001343 ORTHO05D002008 1.1e-20 103.6 108 54.6
CsaV3_3G033610 Cucumis sativus L. HOM05D001343 ORTHO05D002008 2.4e-20 102.4 106 52.8
Sabra16G0114300 Salix brachista HOM05D001343 ORTHO05D002008 4.1e-20 101.7 106 52.8
arahy.Tifrunner.gnm1.ann1.GDT1ET Arachis hypogaea HOM05D001343 ORTHO05D002008 5.3e-20 101.3 107 53.3
Lsat_1_v5_gn_9_35180 Lactuca sativa HOM05D001343 ORTHO05D002008 5.3e-20 101.3 107 57.0
Sed0027614 Sechium edule HOM05D001343 ORTHO05D002008 5.3e-20 101.3 106 52.8
TPR.G8424 Trifolium pratense HOM05D001343 ORTHO05D002008 5.3e-20 101.3 108 54.6
arahy.Tifrunner.gnm1.ann1.CHH07W Arachis hypogaea HOM05D001343 ORTHO05D002008 6.9e-20 100.9 106 52.8
SGA_v2.0_scaffold85G26724 Striga asiatica HOM05D001343 ORTHO05D002008 9.0e-20 100.5 107 49.5
Phvul.008G097800 Phaseolus vulgaris HOM05D001343 ORTHO05D002008 1.5e-19 99.8 108 50.0
SalBow5G4887 Salvia bowleyana HOM05D001343 ORTHO05D002008 1.5e-19 99.8 108 50.9
Zm00001eb397020 Zea mays HOM05D001343 ORTHO05D002008 1.5e-19 99.8 108 52.8
VMungo1383G1365 Vigna mungo HOM05D001343 ORTHO05D002008 3.4e-19 98.6 108 49.1
HanXRQChr10g0294041 Helianthus annuus HOM05D001343 ORTHO05D002008 4.5e-19 98.2 108 52.8
Rhsim05G0217100 Rhododendron simsii HOM05D001343 ORTHO05D002008 5.9e-19 97.8 107 50.5
Os03g0290500 Oryza sativa ssp. japonica HOM05D001343 ORTHO05D002008 1.0e-18 97.1 108 48.1
ECA247G3603 Erigeron canadensis HOM05D001343 ORTHO05D002008 1.3e-18 96.7 108 52.8
Nitab4.5_0014803g0010 Nicotiana tabacum HOM05D001343 ORTHO05D002008 2.2e-18 95.9 107 50.5
Peaxi162Scf00014g00217 Petunia axillaris HOM05D001343 ORTHO05D002008 2.2e-18 95.9 108 49.1
Nitab4.5_0000119g0060 Nicotiana tabacum HOM05D001343 ORTHO05D002008 6.5e-18 94.4 107 51.4
SEGI_20121 Sequoiadendron giganteum HOM05D001343 ORTHO05D002008 1.1e-17 93.6 108 48.1
Cc06_g01180 Coffea canephora HOM05D001343 ORTHO05D002008 2.5e-17 92.4 112 51.8
MELO3C009151.2 Cucumis melo HOM05D001343 ORTHO05D002008 3.2e-17 92.0 112 46.4
Lalb_Chr01g0023011 Lupinus albus HOM05D001343 ORTHO05D002008 3.2e-17 92.0 108 51.9
Lalb_Chr03g0043191 Lupinus albus HOM05D001343 ORTHO05D002008 9.4e-17 90.5 108 50.9
Prupe.6G279500 Prunus persica HOM05D001343 ORTHO05D002008 1.6e-16 89.7 108 53.7
Actinidia11573 Actinidia chinensis HOM05D001343 ORTHO05D002008 2.1e-16 89.4 89 58.4
Mapoly0029s0078 Marchantia polymorpha HOM05D001343 ORTHO05D002008 3.0e-15 85.5 118 44.1
Aa31LG10G9060 Aethionema arabicum HOM05D001343 ORTHO05D002008 3.9e-15 85.1 107 45.8
MD04G1159300 Malus domestica HOM05D001343 ORTHO05D002008 3.9e-15 85.1 108 50.9
SMO271G0030 Selaginella moellendorffii HOM05D001343 ORTHO05D002008 5.1e-15 84.7 116 44.8
THA.LOC104805930 Tarenaya hassleriana HOM05D001343 ORTHO05D002008 1.1e-14 83.6 110 47.3
RcHm_v2.0_Chr3g0462771 Rosa chinensis HOM05D001343 ORTHO05D002008 5.7e-14 81.3 108 47.2
MD12G1169200 Malus domestica HOM05D001343 ORTHO05D002008 7.4e-14 80.9 102 51.0
C01p28880 Brassica napus HOM05D001343 ORTHO05D002008 2.8e-13 79.0 107 43.0
FvH4_6g11250 Fragaria vesca HOM05D001343 ORTHO05D002008 2.8e-13 79.0 108 47.2
BcaC09g50107 Brassica carinata HOM05D001343 ORTHO05D002008 6.3e-13 77.8 108 42.6
BcaNung00366 Brassica carinata HOM05D001343 ORTHO05D002008 1.4e-12 76.6 108 41.7
A01p23240 Brassica napus HOM05D001343 ORTHO05D002008 2.4e-12 75.9 107 42.1
BraA01t02234Z Brassica rapa HOM05D001343 ORTHO05D002008 2.4e-12 75.9 107 42.1
MD04G1157300 Malus domestica HOM05D001343 ORTHO05D002008 2.4e-12 75.9 109 47.7
HPP92_012044 Vanilla planifolia HOM05D001343 ORTHO05D002008 2.4e-12 75.9 108 45.4
Carub.0005s1818 Capsella rubella HOM05D001343 ORTHO05D002008 4.1e-12 75.1 108 42.6
BolC1t02820H Brassica oleracea HOM05D001343 ORTHO05D002008 9.1e-12 73.9 110 41.8
Thhalv10010245m.g Eutrema salsugineum HOM05D001343 ORTHO05D002008 9.1e-12 73.9 108 41.7
Sp5g10440 Schrenkiella parvula HOM05D001343 ORTHO05D002008 9.1e-12 73.9 108 41.7
AL5G32290 Arabidopsis lyrata HOM05D001343 ORTHO05D002008 1.5e-11 73.2 108 41.7
AT3G51830 Arabidopsis thaliana HOM05D001343 ORTHO05D002008 2.2e-10 69.3 108 40.7
Lj2C73G2 Lonicera japonica HOM05D001343 ORTHO05D002008 2.5e-09 65.9 54 63.0
ATR0661G081 Amborella trichopoda HOM05D001343 ORTHO05D002008 3.2e-09 65.5 105 38.1
unitig_8.g4457 Utricularia gibba HOM05D001343 ORTHO05D002008 3.2e-09 65.5 95 44.2
Hund14284 Selenicereus undatus HOM05D001343 ORTHO05D002008 9.4e-09 63.9 54 61.1
SMO169G0043 Selaginella moellendorffii HOM05D001343 ORTHO05D002008 2.1e-08 62.8 108 35.2
SMO202G0015 Selaginella moellendorffii HOM05D001343 ORTHO05D002008 2.1e-08 62.8 110 34.5
SEGI_19241 Sequoiadendron giganteum HOM05D001343 ORTHO05D002008 4.7e-08 61.6 103 34.0
ATR0686G064 Amborella trichopoda HOM05D001343 ORTHO05D002008 7.9e-08 60.8 105 35.2
FAN02G1368 Fragaria x ananassa HOM05D001343 ORTHO05D002008 1.8e-07 59.7 45 64.4
MD12G1171000 Malus domestica HOM05D001343 ORTHO05D002008 2.3e-07 59.3 108 40.7
CDE09G1125 Ceratophyllum demersum HOM05D001343 ORTHO05D002008 5.1e-07 58.2 82 45.1
TAR376G0462 Trochodendron aralioides HOM05D001343 ORTHO05D002008 3.3e-06 55.5 105 35.2
PGR119G2034 Punica granatum HOM05D001343 ORTHO05D002008 7.4e-06 54.3 105 32.4
Sp5g10780 Schrenkiella parvula HOM05D001343 ORTHO05D002008 7.4e-06 54.3 106 34.0
BcaB01g00512 Brassica carinata HOM05D001343 ORTHO05D002008 9.7e-06 53.9 106 35.8
BcaB04g20130 Brassica carinata HOM05D001343 ORTHO05D002008 9.7e-06 53.9 105 36.2


User provided reference genes

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