Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018414 Camellia sinensis var. sinensis HOM05D040364 ORTHO05D001590 3.9e-44 181.0 87 100.0
CSS0022351 Camellia sinensis var. sinensis HOM05D040364 ORTHO05D001590 4.2e-14 81.3 84 51.2
CSS0012382 Camellia sinensis var. sinensis HOM05D040364 ORTHO05D001590 1.2e-13 79.7 84 50.0
Rhsim05G0021000 Rhododendron simsii HOM05D007376 ORTHO05D001590 3.6e-10 68.2 82 43.9
Rhsim05G0055800 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.2e-10 67.4 82 43.9
Rhsim06G0208800 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.2e-10 67.4 82 43.9
Rhsim02G0050500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.8e-09 65.9 82 42.7
vmacro18964 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 9.0e-09 63.5 82 35.4
CSS0047960 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.5e-08 62.8 86 33.7
CSS0030880 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 1.7e-07 59.3 76 39.5
CSS0047144 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.7e-07 59.3 86 32.6
Rhsim08G0151400 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.4e-07 57.4 73 41.1
CSS0004408 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 3.2e-06 55.1 77 31.2
CSS0009315 Camellia sinensis var. sinensis HOM05D009735 ORTHO05D018824 4.2e-06 54.7 77 31.2
Dinv17528 Davidia involucrata HOM05D007376 ORTHO05D001590 4.2e-06 54.7 84 34.5
CSS0005845 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 7.1e-06 53.9 84 29.8
CSS0015660 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 7.1e-06 53.9 84 29.8
CSS0048517 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 9.3e-06 53.5 77 36.4


User provided reference genes

Program Settings