Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018407 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 1.3e-247 859.4 448 100.0
CSS0012709 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 9.3e-243 843.2 441 100.0
Dinv33933 Davidia involucrata HOM05D003845 ORTHO05D004161 2.2e-220 768.8 441 90.9
Actinidia36313 Actinidia chinensis HOM05D003845 ORTHO05D004161 1.4e-219 766.1 440 90.9
Hma1.2p1_0136F.1_g062170 Hydrangea macrophylla HOM05D003845 ORTHO05D004161 4.8e-215 751.1 441 88.0
Hma1.2p1_0136F.1_g062180 Hydrangea macrophylla HOM05D003845 ORTHO05D004161 4.8e-215 751.1 441 88.0
vmacro05567 Vaccinium macrocarpon HOM05D003845 ORTHO05D004161 4.1e-206 721.5 507 77.5
GSVIVG01031064001 Vitis vinifera HOM05D003845 ORTHO05D004161 2.9e-204 715.3 442 84.8
CiPaw.04G040900 Carya illinoinensis HOM05D003845 ORTHO05D004161 7.2e-203 710.7 441 84.6
Cc07_g08900 Coffea canephora HOM05D003845 ORTHO05D004161 1.0e-201 706.8 442 82.4
Thecc.04G136100 Theobroma cacao HOM05D003845 ORTHO05D004161 1.1e-200 703.4 440 83.0
TAR629G0674 Trochodendron aralioides HOM05D003845 ORTHO05D004161 2.6e-200 702.2 442 83.3
RcHm_v2.0_Chr2g0162941 Rosa chinensis HOM05D003845 ORTHO05D004161 7.4e-200 700.7 443 82.4
Duzib133G1200 Durio zibethinus HOM05D003845 ORTHO05D004161 1.8e-198 696.0 440 81.8
MD14G1001900 Malus domestica HOM05D003845 ORTHO05D004161 1.8e-198 696.0 443 82.2
CsaV3_5G039200 Cucumis sativus L. HOM05D003845 ORTHO05D004161 4.1e-198 694.9 442 80.3
MD12G1002400 Malus domestica HOM05D003845 ORTHO05D004161 4.1e-198 694.9 443 81.9
FvH4_6g45230 Fragaria vesca HOM05D003845 ORTHO05D004161 1.6e-197 693.0 441 81.9
MELO3C022095.2 Cucumis melo HOM05D003845 ORTHO05D004161 2.0e-197 692.6 442 80.3
HanXRQChr14g0438731 Helianthus annuus HOM05D003845 ORTHO05D004161 2.6e-197 692.2 441 80.3
Prupe.7G002300 Prunus persica HOM05D003845 ORTHO05D004161 3.5e-197 691.8 442 81.2
ECA232G1957 Erigeron canadensis HOM05D003845 ORTHO05D004161 7.7e-197 690.6 441 80.0
Eucgr.F02484 Eucalyptus grandis HOM05D003845 ORTHO05D004161 1.7e-196 689.5 442 81.9
Migut.H00208 Erythranthe guttata HOM05D003845 ORTHO05D004161 3.8e-196 688.3 441 80.7
Atru.chr8.887 Acer truncatum HOM05D003845 ORTHO05D004161 5.0e-196 688.0 442 80.8
Manes.02G067500 Manihot esculenta HOM05D003845 ORTHO05D004161 5.0e-196 688.0 442 81.2
FAN02G2813 Fragaria x ananassa HOM05D003845 ORTHO05D004161 6.5e-196 687.6 466 77.7
Sopen02g030490 Solanum pennellii HOM05D003845 ORTHO05D004161 1.9e-195 686.0 441 79.1
TWI53G0876 Tripterygium wilfordii HOM05D003845 ORTHO05D004161 4.2e-195 684.9 442 80.1
FAN14G4373 Fragaria x ananassa HOM05D003845 ORTHO05D004161 5.5e-195 684.5 453 79.7
Solyc02g085810.3 Solanum lycopersicum HOM05D003845 ORTHO05D004161 5.5e-195 684.5 441 78.7
CANSAT64G2814 Cannabis sativa HOM05D003845 ORTHO05D004161 1.6e-194 682.9 442 80.5
Potri.004G101250 Populus trichocarpa HOM05D003845 ORTHO05D004161 1.0e-193 680.2 442 79.4
Nn4g23790 Nelumbo nucifera HOM05D003845 ORTHO05D004161 2.3e-193 679.1 442 80.5
PGR004G1392 Punica granatum HOM05D003845 ORTHO05D004161 5.2e-193 677.9 442 79.4
Sed0012635 Sechium edule HOM05D003845 ORTHO05D004161 5.2e-193 677.9 442 79.0
Gohir.A07G071701 Gossypium hirsutum HOM05D003845 ORTHO05D004161 1.5e-192 676.4 439 79.5
Lj1g0009000 Lotus japonicus HOM05D003845 ORTHO05D004161 2.6e-192 675.6 445 78.9
SGA_v2.0_scaffold33G13453 Striga asiatica HOM05D003845 ORTHO05D004161 4.4e-192 674.9 441 78.0
VMungo1383G2489 Vigna mungo HOM05D003845 ORTHO05D004161 1.3e-191 673.3 444 78.6
Glyma.18G297900 Glycine max HOM05D003845 ORTHO05D004161 1.4e-190 669.8 444 79.1
Lsat_1_v5_gn_4_153700 Lactuca sativa HOM05D003845 ORTHO05D004161 9.1e-190 667.2 441 78.2
Ca_03194_v3 Cicer arietinum L. HOM05D003845 ORTHO05D003700 1.2e-189 666.8 441 77.8
Lalb_Chr21g0317871 Lupinus albus HOM05D003845 ORTHO05D004161 2.0e-189 666.0 449 77.7
Sc23g0006880 Simmondsia chinensis HOM05D003845 ORTHO05D004161 2.0e-189 666.0 440 78.9
Gohir.D07G076100 Gossypium hirsutum HOM05D003845 ORTHO05D004161 2.7e-189 665.6 439 78.4
PSO063G7466 Papaver somniferum HOM05D003845 ORTHO05D004161 3.5e-189 665.2 442 78.5
Gorai.001G080300 Gossypium raimondii HOM05D003845 ORTHO05D004161 5.9e-189 664.5 441 78.5
Medtr7g406950 Medicago truncatula HOM05D003845 ORTHO05D004161 2.9e-188 662.1 432 78.0
Phvul.008G004700 Phaseolus vulgaris HOM05D003845 ORTHO05D004161 1.9e-187 659.4 444 77.9
PSO782G1231 Papaver somniferum HOM05D003845 ORTHO05D004161 4.2e-187 658.3 442 77.8
Lj2C445T15 Lonicera japonica HOM05D003845 ORTHO05D004161 2.8e-183 645.6 440 77.7
Thhalv10017993m.g Eutrema salsugineum HOM05D003845 ORTHO05D004161 3.7e-183 645.2 442 75.6
Aqoxy3G03940 Aquilegia oxysepala HOM05D003845 ORTHO05D004161 6.3e-183 644.4 442 76.5
THA.LOC104805559 Tarenaya hassleriana HOM05D003845 ORTHO05D004161 3.8e-180 635.2 442 74.0
arahy.Tifrunner.gnm1.ann1.4V7WUF Arachis hypogaea HOM05D003845 ORTHO05D004161 5.0e-180 634.8 434 76.7
arahy.Tifrunner.gnm1.ann1.UJVA95 Arachis hypogaea HOM05D003845 ORTHO05D004161 5.0e-180 634.8 434 76.7
Aa31LG2G3530 Aethionema arabicum HOM05D003845 ORTHO05D004161 6.6e-180 634.4 442 74.7
Sp5g22090 Schrenkiella parvula HOM05D003845 ORTHO05D004161 6.6e-180 634.4 442 74.9
AT1G67140 Arabidopsis thaliana HOM05D003845 ORTHO05D004161 2.5e-179 632.5 442 74.7
Oeu052985.1 Olea europaea HOM05D003845 ORTHO05D004161 1.2e-178 630.2 441 76.4
AUR62014525 Chenopodium quinoa HOM05D003845 ORTHO05D004161 2.1e-178 629.4 444 74.3
AL2G25520 Arabidopsis lyrata HOM05D003845 ORTHO05D004161 2.8e-178 629.0 442 74.4
BolC6t39126H Brassica oleracea HOM05D003845 ORTHO05D004161 3.6e-178 628.6 442 74.2
EL10Ac2g04592 Beta vulgaris HOM05D003845 ORTHO05D004161 4.7e-178 628.2 442 75.3
C06p43130 Brassica napus HOM05D003845 ORTHO05D004161 8.0e-178 627.5 442 74.2
BraA07t31006Z Brassica rapa HOM05D003845 ORTHO05D004161 8.0e-178 627.5 442 74.2
Nitab4.5_0002288g0020 Nicotiana tabacum HOM05D003845 ORTHO05D004161 1.0e-177 627.1 469 70.8
Nitab4.5_0001569g0050 Nicotiana tabacum HOM05D003845 ORTHO05D004161 1.4e-177 626.7 442 74.7
A07p33800 Brassica napus HOM05D003845 ORTHO05D004161 5.2e-177 624.8 442 74.0
Carub.0002s1343 Capsella rubella HOM05D003845 ORTHO05D004161 3.7e-175 618.6 442 73.8
Ciclev10011943m.g Citrus clementina HOM05D003845 ORTHO05D004161 1.4e-174 616.7 391 81.1
Hund16134 Selenicereus undatus HOM05D003845 ORTHO05D004161 3.1e-174 615.5 440 74.5
ClCG11G005430 Citrullus lanatus HOM05D003845 ORTHO05D004161 1.3e-167 593.6 379 79.7
SalBow3G0178 Salvia bowleyana HOM05D003845 ORTHO05D004161 1.7e-167 593.2 612 57.4
AUR62008978 Chenopodium quinoa HOM05D003845 ORTHO05D004161 1.2e-160 570.5 434 70.7
HPP92_003935 Vanilla planifolia HOM05D003845 ORTHO05D004161 2.1e-157 559.7 442 67.2
Zm00001eb382690 Zea mays HOM05D003845 ORTHO05D004161 1.6e-154 550.1 433 66.7
HPP92_003934 Vanilla planifolia HOM05D003845 ORTHO05D004161 8.9e-153 544.3 442 66.1
unitig_899.g14510 Utricularia gibba HOM05D003845 ORTHO05D004161 8.6e-148 527.7 441 65.1
SEGI_40473 Sequoiadendron giganteum HOM05D003845 ORTHO05D004161 7.6e-144 514.6 408 65.7
Peaxi162Scf00814g00242 Petunia axillaris HOM05D003845 ORTHO05D004161 4.3e-139 498.8 374 70.6
SHI17842 Sapria himalayana HOM05D003845 ORTHO05D004161 8.1e-138 494.6 442 60.2
Ah.10g037590 Amaranthus hybridus HOM05D003845 ORTHO05D004161 2.1e-133 479.9 435 62.8
Mapoly0101s0033 Marchantia polymorpha HOM05D003845 ORTHO05D004161 2.0e-128 463.4 433 57.7
Rhsim09G0080700 Rhododendron simsii HOM05D003845 ORTHO05D004161 5.8e-128 461.8 368 71.2
ATR0564G289 Amborella trichopoda HOM05D003845 ORTHO05D004161 8.4e-119 431.4 288 77.8
Pp3c15_3000 Physcomitrium patens HOM05D003845 ORTHO05D004161 7.4e-115 418.3 434 54.4
CAN.G625.4 Capsicum annuum HOM05D003845 ORTHO05D004161 6.9e-113 411.8 279 73.8
AagrBONN_evm.TU.Sc2ySwM_368.2329__2330 Anthoceros agrestis HOM05D003845 ORTHO05D004161 1.1e-110 404.4 416 54.8
Os06g0505302 Oryza sativa ssp. japonica HOM05D003845 ORTHO05D004161 1.9e-110 403.7 377 57.6
QL02p051715 Quercus lobata HOM05D003845 ORTHO05D004161 1.6e-109 400.6 572 45.1
SMO239G0031 Selaginella moellendorffii HOM05D003845 ORTHO05D004161 2.5e-107 393.3 434 52.1
Dinv34837 Davidia involucrata HOM05D003845 ORTHO05D004161 1.4e-105 387.5 441 53.5
CBR_g31193 Chara braunii HOM05D003845 ORTHO05D004161 1.3e-103 380.9 431 48.5
EL10Ac2g04610 Beta vulgaris HOM05D003845 ORTHO05D004161 7.4e-99 365.2 318 64.2
CDE02G4394 Ceratophyllum demersum HOM05D003845 ORTHO05D004161 1.3e-95 354.4 293 63.5
RcHm_v2.0_Chr2g0163391 Rosa chinensis HOM05D003845 ORTHO05D004161 2.2e-90 337.0 292 64.7
CAN.G625.3 Capsicum annuum HOM05D003845 ORTHO05D004161 1.5e-67 261.2 160 84.4
Haze_14141 Corylus avellana HOM05D003845 ORTHO05D004161 5.0e-55 219.5 129 87.6
QL02p051676 Quercus lobata HOM05D003845 ORTHO05D004161 1.5e-54 218.0 125 90.4
Cpa.g.sc179.9 Carica papaya HOM05D003845 ORTHO05D004161 9.5e-54 215.3 129 84.5
Actinidia15875 Actinidia chinensis HOM05D003845 ORTHO05D004161 8.0e-53 212.2 119 93.3
Lsat_1_v5_gn_4_153641 Lactuca sativa HOM05D003845 ORTHO05D004161 1.9e-49 201.1 245 51.4
Cre16.g684100 Chlamydomonas reinhardtii HOM05D003845 ORTHO05D004161 1.2e-24 118.6 460 28.0
Cpa.g.c36099 Carica papaya HOM05D003845 ORTHO05D004161 8.1e-21 105.9 66 83.3
ATR0564G046 Amborella trichopoda HOM05D003845 ORTHO05D004161 9.9e-19 99.0 68 73.5
Actinidia17348 Actinidia chinensis HOM05D003226 ORTHO05D015784 4.9e-18 96.7 56 85.7
Actinidia17345 Actinidia chinensis HOM05D003845 ORTHO05D004161 6.4e-18 96.3 54 88.9
CDE02G0049 Ceratophyllum demersum HOM05D003845 ORTHO05D004161 1.4e-17 95.1 68 70.6
COL.COLO4_16180 Corchorus olitorius HOM05D003845 ORTHO05D004161 1.2e-16 92.0 53 84.9
arahy.Tifrunner.gnm1.ann1.395ZIT Arachis hypogaea HOM05D003845 ORTHO05D004161 3.5e-16 90.5 56 76.8
RcHm_v2.0_Chr2g0123031 Rosa chinensis HOM05D003845 ORTHO05D004161 3.5e-16 90.5 70 72.9
arahy.Tifrunner.gnm1.ann1.57NG5G Arachis hypogaea HOM05D003845 ORTHO05D004161 4.6e-16 90.1 53 81.1
Pp3c9_4980 Physcomitrium patens HOM05D003845 ORTHO05D004161 2.4e-12 77.8 115 40.9
TPR.G40067 Trifolium pratense HOM05D003845 ORTHO05D004161 3.1e-12 77.4 51 78.4
Hund04285 Selenicereus undatus HOM05D003845 ORTHO05D004161 2.6e-11 74.3 99 51.5
Lsat_1_v5_gn_1_87981 Lactuca sativa HOM05D003845 ORTHO05D004161 4.5e-11 73.6 54 64.8
PRCOL_00002157 Prasinoderma coloniale HOM05D003845 ORTHO05D004161 7.6e-11 72.8 189 31.2
arahy.Tifrunner.gnm1.ann1.MNN8Y6 Arachis hypogaea HOM05D003845 ORTHO05D004161 5.4e-09 66.6 63 58.7
ClCG11G005420 Citrullus lanatus HOM05D003845 ORTHO05D004161 6.0e-08 63.2 50 68.0
Actinidia17346 Actinidia chinensis HOM05D003226 ORTHO05D005723 6.7e-07 59.7 33 87.9
MBI02_g02968_MAGBIO Magnolia biondii HOM05D003845 ORTHO05D004161 1.1e-06 58.9 45 68.9


User provided reference genes

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