Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018388 Camellia sinensis var. sinensis HOM05D000269 ORTHO05D023196 6.9e-34 146.7 75 100.0
CSS0048787 Camellia sinensis var. sinensis HOM05D000269 ORTHO05D000216 8.5e-16 86.7 52 80.8
Dinv30515 Davidia involucrata HOM05D000269 ORTHO05D000216 8.5e-16 86.7 52 82.7
CSS0042182 Camellia sinensis var. sinensis HOM05D000269 ORTHO05D000216 2.5e-15 85.1 52 78.8
Glyma.07G006500 Glycine max HOM05D000269 ORTHO05D000216 9.4e-15 83.2 52 75.0
Nitab4.5_0000671g0050 Nicotiana tabacum HOM05D000269 ORTHO05D000216 9.4e-15 83.2 52 78.8
Nitab4.5_0013869g0010 Nicotiana tabacum HOM05D000269 ORTHO05D000216 9.4e-15 83.2 52 78.8
RcHm_v2.0_Chr2g0137741 Rosa chinensis HOM05D000269 ORTHO05D000216 2.1e-14 82.0 52 76.9
VMungo0331G0567 Vigna mungo HOM05D000269 ORTHO05D000216 2.1e-14 82.0 52 73.1
Medtr4g011970 Medicago truncatula HOM05D000269 ORTHO05D000216 3.6e-14 81.3 51 76.5
Actinidia01800 Actinidia chinensis HOM05D000269 ORTHO05D000216 4.7e-14 80.9 52 75.0
arahy.Tifrunner.gnm1.ann1.8X1M4H Arachis hypogaea HOM05D000269 ORTHO05D000216 6.1e-14 80.5 52 73.1
arahy.Tifrunner.gnm1.ann1.W1WFDC Arachis hypogaea HOM05D000269 ORTHO05D000216 6.1e-14 80.5 52 73.1
CSS0009898 Camellia sinensis var. sinensis HOM05D000269 ORTHO05D000216 6.1e-14 80.5 48 81.2
Manes.04G122800 Manihot esculenta HOM05D000269 ORTHO05D000216 6.1e-14 80.5 52 73.1
Sabra01G0147400 Salix brachista HOM05D000269 ORTHO05D000216 6.1e-14 80.5 52 73.1
Phvul.010G151000 Phaseolus vulgaris HOM05D000269 ORTHO05D000216 8.0e-14 80.1 52 71.2
CAN.G438.62 Capsicum annuum HOM05D000269 ORTHO05D000216 1.0e-13 79.7 52 75.0
Hma1.2p1_0682F.1_g202740 Hydrangea macrophylla HOM05D000269 ORTHO05D000216 1.0e-13 79.7 52 71.2
Solyc03g120250.3 Solanum lycopersicum HOM05D000269 ORTHO05D000216 1.0e-13 79.7 52 76.9
Sopen03g039130 Solanum pennellii HOM05D000269 ORTHO05D000216 1.0e-13 79.7 52 76.9
PGSC0003DMG400002643 Solanum tuberosum HOM05D000269 ORTHO05D000216 1.0e-13 79.7 52 76.9
GSVIVG01017118001 Vitis vinifera HOM05D000269 ORTHO05D000216 1.0e-13 79.7 52 73.1
Ciclev10027402m.g Citrus clementina HOM05D000269 ORTHO05D000216 1.8e-13 79.0 52 73.1
Glyma.15G014000 Glycine max HOM05D000269 ORTHO05D000216 1.8e-13 79.0 52 69.2
Lj3g0008474 Lotus japonicus HOM05D000269 ORTHO05D000216 1.8e-13 79.0 52 71.2
Lalb_Chr01g0012621 Lupinus albus HOM05D000269 ORTHO05D023196 1.8e-13 79.0 52 71.2
Nitab4.5_0008982g0050 Nicotiana tabacum HOM05D000269 ORTHO05D000216 1.8e-13 79.0 52 71.2
SalBow2G2871 Salvia bowleyana HOM05D000269 ORTHO05D000216 1.8e-13 79.0 52 76.9
Migut.I00861 Erythranthe guttata HOM05D000269 ORTHO05D000216 2.3e-13 78.6 52 75.0
Gohir.A05G128366 Gossypium hirsutum HOM05D000269 ORTHO05D000216 2.3e-13 78.6 52 71.2
Gohir.D05G128800 Gossypium hirsutum HOM05D000269 ORTHO05D000216 2.3e-13 78.6 52 71.2
Gorai.009G132900 Gossypium raimondii HOM05D000269 ORTHO05D000216 2.3e-13 78.6 52 71.2
Potri.003G056200 Populus trichocarpa HOM05D000269 ORTHO05D000216 2.3e-13 78.6 52 69.2
Cc04_g03500 Coffea canephora HOM05D000269 ORTHO05D000216 3.0e-13 78.2 52 73.1
Glyma.08G207100 Glycine max HOM05D000269 ORTHO05D000216 4.0e-13 77.8 52 71.2
Lalb_Chr22g0351231 Lupinus albus HOM05D000269 ORTHO05D000216 4.0e-13 77.8 52 67.3
arahy.Tifrunner.gnm1.ann1.6SZQ4H Arachis hypogaea HOM05D000269 ORTHO05D000216 5.2e-13 77.4 52 69.2
arahy.Tifrunner.gnm1.ann1.BJ441X Arachis hypogaea HOM05D000269 ORTHO05D000216 5.2e-13 77.4 52 69.2
Duzib235G1489 Durio zibethinus HOM05D000269 ORTHO05D000216 5.2e-13 77.4 52 71.2
Oeu025386.2 Olea europaea HOM05D000269 ORTHO05D000216 5.2e-13 77.4 52 73.1
Peaxi162Scf00015g00327 Petunia axillaris HOM05D000269 ORTHO05D000216 5.2e-13 77.4 52 75.0
Atru.chr1.3263 Acer truncatum HOM05D000269 ORTHO05D000216 6.8e-13 77.0 52 71.2
EL10Ac9g21994 Beta vulgaris HOM05D000269 ORTHO05D000216 6.8e-13 77.0 52 73.1
CAN.G12.19 Capsicum annuum HOM05D000269 ORTHO05D000216 6.8e-13 77.0 52 69.2
Manes.11G048000 Manihot esculenta HOM05D000269 ORTHO05D000216 6.8e-13 77.0 52 71.2
vmacro18919 Vaccinium macrocarpon HOM05D000269 ORTHO05D000216 6.8e-13 77.0 60 68.3
Ah.01g021280 Amaranthus hybridus HOM05D000269 ORTHO05D000216 8.8e-13 76.6 52 71.2
Migut.D01035 Erythranthe guttata HOM05D000269 ORTHO05D000216 1.2e-12 76.3 52 71.2
Lalb_Chr14g0373431 Lupinus albus HOM05D000269 ORTHO05D023196 1.2e-12 76.3 52 67.3
Oeu019540.1 Olea europaea HOM05D000269 ORTHO05D000216 1.2e-12 76.3 52 73.1
TPR.G37247 Trifolium pratense HOM05D000269 ORTHO05D000216 1.2e-12 76.3 52 69.2
Hund00612 Selenicereus undatus HOM05D000269 ORTHO05D000216 1.5e-12 75.9 52 69.2
VMungo1080G1364 Vigna mungo HOM05D000269 ORTHO05D000216 1.5e-12 75.9 52 67.3
Aqoxy7G01796 Aquilegia oxysepala HOM05D000269 ORTHO05D000216 2.0e-12 75.5 52 73.1
Glyma.13G360000 Glycine max HOM05D000269 ORTHO05D000216 2.0e-12 75.5 52 65.4
Medtr2g102243 Medicago truncatula HOM05D000269 ORTHO05D000216 2.0e-12 75.5 52 69.2
Psat7g252760 Pisum sativum HOM05D000269 ORTHO05D000216 2.0e-12 75.5 51 72.5
Sabra03G0031600 Salix brachista HOM05D000269 ORTHO05D000216 2.0e-12 75.5 52 69.2
Carub.0003s1572 Capsella rubella HOM05D000269 ORTHO05D000216 2.6e-12 75.1 52 71.2
Lalb_Chr04g0262631 Lupinus albus HOM05D000269 ORTHO05D000216 2.6e-12 75.1 52 67.3
MD17G1196100 Malus domestica HOM05D000269 ORTHO05D000216 2.6e-12 75.1 52 73.1
Nitab4.5_0002438g0030 Nicotiana tabacum HOM05D000269 ORTHO05D000216 2.6e-12 75.1 52 65.4
Hund06607 Selenicereus undatus HOM05D000269 ORTHO05D000216 2.6e-12 75.1 52 69.2
Thecc.06G086200 Theobroma cacao HOM05D000269 ORTHO05D000216 2.6e-12 75.1 52 69.2
Lj9C507T9 Lonicera japonica HOM05D000269 ORTHO05D000216 3.4e-12 74.7 52 73.1
TAR383G0955 Trochodendron aralioides HOM05D000269 ORTHO05D000216 3.4e-12 74.7 52 73.1
BcaC05g28919 Brassica carinata HOM05D000269 ORTHO05D000216 5.7e-12 73.9 52 69.2
C05p50460 Brassica napus HOM05D000269 ORTHO05D000216 5.7e-12 73.9 52 69.2
Ca_01111_v3 Cicer arietinum L. HOM05D000269 ORTHO05D000216 5.7e-12 73.9 52 67.3
AL3G28640 Arabidopsis lyrata HOM05D000269 ORTHO05D000216 7.5e-12 73.6 52 69.2
BcaC01g03844 Brassica carinata HOM05D000269 ORTHO05D000216 7.5e-12 73.6 52 69.2
A05p33460 Brassica napus HOM05D000269 ORTHO05D000216 7.5e-12 73.6 52 69.2
C03p48020 Brassica napus HOM05D000269 ORTHO05D000216 7.5e-12 73.6 52 69.2
BolC3t17081H Brassica oleracea HOM05D000269 ORTHO05D000216 7.5e-12 73.6 52 69.2
BolC5t33792H Brassica oleracea HOM05D000269 ORTHO05D000216 7.5e-12 73.6 52 69.2
BraA05t22170Z Brassica rapa HOM05D000269 ORTHO05D000216 7.5e-12 73.6 52 69.2
Duzib192G0413 Durio zibethinus HOM05D000269 ORTHO05D000216 7.5e-12 73.6 52 69.2
Sp3g14340 Schrenkiella parvula HOM05D000269 ORTHO05D000216 7.5e-12 73.6 52 69.2
Sc12g0009180 Simmondsia chinensis HOM05D000269 ORTHO05D000216 7.5e-12 73.6 52 67.3
Solyc12g043040.1 Solanum lycopersicum HOM05D000269 ORTHO05D000216 7.5e-12 73.6 52 65.4
Sopen12g022310 Solanum pennellii HOM05D000269 ORTHO05D000216 7.5e-12 73.6 52 65.4
TAR626G0192 Trochodendron aralioides HOM05D000269 ORTHO05D000216 7.5e-12 73.6 52 71.2
BcaB04g18871 Brassica carinata HOM05D000269 ORTHO05D000216 9.7e-12 73.2 52 69.2
BcaB06g25697 Brassica carinata HOM05D000269 ORTHO05D000216 9.7e-12 73.2 52 69.2
A03p54590 Brassica napus HOM05D000269 ORTHO05D000216 9.7e-12 73.2 52 69.2
BraA03t14526Z Brassica rapa HOM05D000269 ORTHO05D000216 9.7e-12 73.2 52 69.2
Peaxi162Scf00034g00911 Petunia axillaris HOM05D000269 ORTHO05D000216 9.7e-12 73.2 52 67.3
Psat5g299160 Pisum sativum HOM05D000269 ORTHO05D000216 9.7e-12 73.2 52 65.4
Aa31LG8G3160 Aethionema arabicum HOM05D000269 ORTHO05D000216 1.3e-11 72.8 52 67.3
Ciclev10010204m.g Citrus clementina HOM05D000269 ORTHO05D000216 1.3e-11 72.8 52 71.2
AT3G15990 Arabidopsis thaliana HOM05D000269 ORTHO05D000216 1.7e-11 72.4 52 67.3
CARHR091120 Cardamine hirsuta HOM05D000269 ORTHO05D000216 1.7e-11 72.4 51 68.6
AUR62011625 Chenopodium quinoa HOM05D000269 ORTHO05D000216 1.7e-11 72.4 52 67.3
FvH4_6g31040 Fragaria vesca HOM05D000269 ORTHO05D000216 1.7e-11 72.4 52 69.2
FAN05G2620 Fragaria x ananassa HOM05D000269 ORTHO05D000216 1.7e-11 72.4 52 69.2
FAN09G3398 Fragaria x ananassa HOM05D000269 ORTHO05D000216 1.7e-11 72.4 52 69.2
FAN14G5117 Fragaria x ananassa HOM05D000269 ORTHO05D000216 1.7e-11 72.4 52 69.2
Lj3g0009063 Lotus japonicus HOM05D000269 ORTHO05D000216 1.7e-11 72.4 52 65.4
THA.LOC104818001 Tarenaya hassleriana HOM05D000269 ORTHO05D000216 1.7e-11 72.4 52 67.3
TWI18G0533 Tripterygium wilfordii HOM05D000269 ORTHO05D000216 1.7e-11 72.4 52 63.5
Actinidia32760 Actinidia chinensis HOM05D000269 ORTHO05D000216 2.2e-11 72.0 52 71.2
BcaC09g48579 Brassica carinata HOM05D000269 ORTHO05D000216 2.2e-11 72.0 52 67.3
A01p38110 Brassica napus HOM05D000269 ORTHO05D000216 2.2e-11 72.0 52 67.3
C01p48380 Brassica napus HOM05D000269 ORTHO05D000216 2.2e-11 72.0 52 67.3
BolC1t04797H Brassica oleracea HOM05D000269 ORTHO05D000216 2.2e-11 72.0 52 67.3
BraA01t03869Z Brassica rapa HOM05D000269 ORTHO05D000216 2.2e-11 72.0 52 67.3
CiPaw.02G151600 Carya illinoinensis HOM05D000269 ORTHO05D000216 2.2e-11 72.0 52 67.3
DCAR_007557 Daucus carota HOM05D000269 ORTHO05D000216 2.2e-11 72.0 52 61.5
MD09G1214000 Malus domestica HOM05D000269 ORTHO05D000216 2.2e-11 72.0 51 70.6
Phvul.005G171800 Phaseolus vulgaris HOM05D000269 ORTHO05D000216 2.2e-11 72.0 52 65.4
BcaB04g20888 Brassica carinata HOM05D000269 ORTHO05D000216 2.8e-11 71.6 52 67.3
Lsat_1_v5_gn_1_34940 Lactuca sativa HOM05D000269 ORTHO05D000216 2.8e-11 71.6 52 67.3
PGR102G0168 Punica granatum HOM05D000269 ORTHO05D000216 2.8e-11 71.6 52 67.3
Aa31LG10G2560 Aethionema arabicum HOM05D000269 ORTHO05D000216 3.7e-11 71.2 52 65.4
AUR62011011 Chenopodium quinoa HOM05D000269 ORTHO05D000216 3.7e-11 71.2 68 57.4
PGSC0003DMG400028635 Solanum tuberosum HOM05D000269 ORTHO05D000216 3.7e-11 71.2 52 63.5
Cfa002060 Carpinus fangiana HOM05D000269 ORTHO05D000216 4.8e-11 70.9 52 63.5
Haze_16440 Corylus avellana HOM05D000269 ORTHO05D000216 4.8e-11 70.9 52 63.5
Prupe.3G072000 Prunus persica HOM05D000269 ORTHO05D000216 4.8e-11 70.9 52 67.3
A03p39620 Brassica napus HOM05D000269 ORTHO05D000216 6.3e-11 70.5 52 67.3
AUR62021522 Chenopodium quinoa HOM05D000269 ORTHO05D000216 6.3e-11 70.5 68 57.4
BraA03t13109Z Brassica rapa HOM05D000269 ORTHO05D000216 8.3e-11 70.1 52 67.3
Cpa.g.sc155.30 Carica papaya HOM05D000269 ORTHO05D000216 8.3e-11 70.1 52 63.5
CiPaw.01G239900 Carya illinoinensis HOM05D000269 ORTHO05D000216 8.3e-11 70.1 52 67.3
AUR62016440 Chenopodium quinoa HOM05D000269 ORTHO05D000216 8.3e-11 70.1 52 63.5
Nn2g11794 Nelumbo nucifera HOM05D000269 ORTHO05D000216 8.3e-11 70.1 52 67.3
Sed0016459 Sechium edule HOM05D000269 ORTHO05D000216 8.3e-11 70.1 52 65.4
TWI63G0380 Tripterygium wilfordii HOM05D000269 ORTHO05D000216 8.3e-11 70.1 72 54.2
HanXRQChr09g0275301 Helianthus annuus HOM05D000269 ORTHO05D000216 1.1e-10 69.7 51 66.7
Lsat_1_v5_gn_4_103621 Lactuca sativa HOM05D000269 ORTHO05D000216 1.1e-10 69.7 52 65.4
QL05p024352 Quercus lobata HOM05D000269 ORTHO05D000216 1.1e-10 69.7 52 61.5
Eucgr.J02996 Eucalyptus grandis HOM05D000269 ORTHO05D000216 2.4e-10 68.6 52 61.5
EL10Ac8g18515 Beta vulgaris HOM05D000269 ORTHO05D000216 3.1e-10 68.2 68 55.9
ClCG09G002190 Citrullus lanatus HOM05D000269 ORTHO05D000216 3.1e-10 68.2 52 61.5
ECA247G2655 Erigeron canadensis HOM05D000269 ORTHO05D000216 4.1e-10 67.8 52 65.4
TWI75G1261 Tripterygium wilfordii HOM05D000269 ORTHO05D000216 4.1e-10 67.8 52 59.6
MELO3C024226.2 Cucumis melo HOM05D000269 ORTHO05D000216 7.0e-10 67.0 52 61.5
Nn8g39233 Nelumbo nucifera HOM05D000269 ORTHO05D000216 9.1e-10 66.6 52 65.4
Hund09194 Selenicereus undatus HOM05D000269 ORTHO05D000216 9.1e-10 66.6 53 67.9
CsaV3_7G033120 Cucumis sativus L. HOM05D000269 ORTHO05D000216 1.2e-09 66.2 52 59.6
SGA_v2.0_scaffold5G02594 Striga asiatica HOM05D000269 ORTHO05D000216 1.2e-09 66.2 51 62.7
ECA232G3608 Erigeron canadensis HOM05D000269 ORTHO05D000216 1.6e-09 65.9 51 62.7
PSO478G4175 Papaver somniferum HOM05D000269 ORTHO05D000216 1.6e-09 65.9 52 59.6
PSO782G3739 Papaver somniferum HOM05D000269 ORTHO05D000216 1.6e-09 65.9 52 59.6
Gorai.002G059100 Gossypium raimondii HOM05D000269 ORTHO05D000216 2.0e-09 65.5 43 69.8
Gohir.D03G064200 Gossypium hirsutum HOM05D000269 ORTHO05D000216 2.7e-09 65.1 43 69.8
MBI04_g10455_MAGBIO Magnolia biondii HOM05D000269 ORTHO05D000216 2.7e-09 65.1 51 60.8
Hund26169 Selenicereus undatus HOM05D000269 ORTHO05D000216 2.7e-09 65.1 48 66.7
GSVIVG01015412001 Vitis vinifera HOM05D000269 ORTHO05D000216 2.7e-09 65.1 52 63.5
HanXRQChr16g0501011 Helianthus annuus HOM05D000269 ORTHO05D000216 3.5e-09 64.7 51 62.7
PSO063G3519 Papaver somniferum HOM05D000269 ORTHO05D000216 3.5e-09 64.7 52 59.6
PSO782G2733 Papaver somniferum HOM05D000269 ORTHO05D000216 3.5e-09 64.7 52 57.7
PSO782G4510 Papaver somniferum HOM05D000269 ORTHO05D000216 3.5e-09 64.7 52 57.7
CANSAT56G3975 Cannabis sativa HOM05D000269 ORTHO05D000216 4.5e-09 64.3 52 59.6
Gohir.A02G121700 Gossypium hirsutum HOM05D000269 ORTHO05D000216 4.5e-09 64.3 43 65.1
PSO339G0757 Papaver somniferum HOM05D000269 ORTHO05D000216 4.5e-09 64.3 52 57.7
Ah.14g081810 Amaranthus hybridus HOM05D000269 ORTHO05D000216 5.9e-09 63.9 68 50.0
Cpa.g.sc23.119 Carica papaya HOM05D000269 ORTHO05D000216 5.9e-09 63.9 52 61.5
DCAR_028723 Daucus carota HOM05D000269 ORTHO05D000216 7.7e-09 63.5 52 61.5
PSO782G4235 Papaver somniferum HOM05D000269 ORTHO05D000216 7.7e-09 63.5 52 57.7
CSS0026768 Camellia sinensis var. sinensis HOM05D000269 ORTHO05D000216 1.7e-08 62.4 52 63.5
Dinv36614 Davidia involucrata HOM05D000269 ORTHO05D000216 2.9e-08 61.6 52 61.5
TAR624G0028 Trochodendron aralioides HOM05D000269 ORTHO05D000216 5.0e-08 60.8 41 73.2
CANSAT56G1887 Cannabis sativa HOM05D000269 ORTHO05D000216 8.5e-08 60.1 51 52.9
CDE02G4317 Ceratophyllum demersum HOM05D000269 ORTHO05D000216 1.5e-07 59.3 52 48.1
CDE04G0041 Ceratophyllum demersum HOM05D000269 ORTHO05D000216 1.9e-07 58.9 52 48.1
HanXRQChr04g0096031 Helianthus annuus HOM05D000269 ORTHO05D023196 1.9e-07 58.9 41 68.3
ATR0564G051 Amborella trichopoda HOM05D000269 ORTHO05D000216 2.5e-07 58.5 52 53.8
Os06g0143700 Oryza sativa ssp. japonica HOM05D000269 ORTHO05D000216 1.6e-06 55.8 48 50.0
HPP92_000678 Vanilla planifolia HOM05D000269 ORTHO05D000216 1.6e-06 55.8 54 51.9
ECA234G0181 Erigeron canadensis HOM05D000269 ORTHO05D000216 3.6e-06 54.7 72 40.3
SEGI_38405 Sequoiadendron giganteum HOM05D000269 ORTHO05D000216 3.6e-06 54.7 51 49.0
ATR0037G008 Amborella trichopoda HOM05D000269 ORTHO05D000216 4.7e-06 54.3 52 51.9
MD11G1280200 Malus domestica HOM05D000269 ORTHO05D000216 4.7e-06 54.3 51 45.1
SalBow4G1895 Salvia bowleyana HOM05D000269 ORTHO05D000216 6.1e-06 53.9 51 49.0
SEGI_19051 Sequoiadendron giganteum HOM05D000269 ORTHO05D000216 6.1e-06 53.9 51 54.9
SGA_v2.0_scaffold81G26043 Striga asiatica HOM05D000269 ORTHO05D000216 6.1e-06 53.9 51 49.0
arahy.Tifrunner.gnm1.ann1.BP1D2E Arachis hypogaea HOM05D000269 ORTHO05D000216 8.0e-06 53.5 51 49.0
arahy.Tifrunner.gnm1.ann1.QXV1YS Arachis hypogaea HOM05D000269 ORTHO05D000216 8.0e-06 53.5 51 49.0
MD03G1259900 Malus domestica HOM05D000269 ORTHO05D000216 8.0e-06 53.5 51 45.1
SMO197G0071 Selaginella moellendorffii HOM05D000269 ORTHO05D000216 8.0e-06 53.5 48 56.2
HPP92_024078 Vanilla planifolia HOM05D000269 ORTHO05D000216 8.0e-06 53.5 52 48.1


User provided reference genes

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