Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018323 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000611 1.3e-45 186.0 96 100.0
RhsimUnG0143200 Rhododendron simsii HOM05D000045 ORTHO05D000611 6.4e-16 87.4 74 66.2
RhsimUnG0134500 Rhododendron simsii HOM05D000045 ORTHO05D000611 8.3e-16 87.0 70 68.6
Haze_01501 Corylus avellana HOM05D000045 ORTHO05D000611 1.1e-15 86.7 62 71.0
Manes.04G043000 Manihot esculenta HOM05D000045 ORTHO05D000611 3.2e-15 85.1 62 69.4
Cpa.g.sc9.285 Carica papaya HOM05D000045 ORTHO05D000611 5.4e-15 84.3 61 72.1
CiPaw.01G099600 Carya illinoinensis HOM05D000045 ORTHO05D000611 1.6e-14 82.8 62 67.7
Duzib212G0671 Durio zibethinus HOM05D000045 ORTHO05D000611 1.6e-14 82.8 61 70.5
Hma1.2p1_0847F.1_g227910 Hydrangea macrophylla HOM05D000045 ORTHO05D000611 2.7e-14 82.0 62 69.4
Atru.chr4.1190 Acer truncatum HOM05D000045 ORTHO05D000611 4.6e-14 81.3 62 64.5
Actinidia28985 Actinidia chinensis HOM05D000045 ORTHO05D000611 4.6e-14 81.3 64 71.9
Gohir.D10G128700 Gossypium hirsutum HOM05D000045 ORTHO05D000611 6.0e-14 80.9 62 66.1
Gorai.011G142100 Gossypium raimondii HOM05D000045 ORTHO05D000611 6.0e-14 80.9 62 66.1
Gohir.A10G138100 Gossypium hirsutum HOM05D000045 ORTHO05D000611 7.8e-14 80.5 62 66.1
Ciclev10021853m.g Citrus clementina HOM05D000045 ORTHO05D000611 1.3e-13 79.7 61 67.2
Nn1g09624 Nelumbo nucifera HOM05D000045 ORTHO05D000611 1.7e-13 79.3 59 69.5
COL.COLO4_07675 Corchorus olitorius HOM05D000045 ORTHO05D000611 2.3e-13 79.0 60 68.3
GSVIVG01010765001 Vitis vinifera HOM05D000045 ORTHO05D000611 2.3e-13 79.0 64 64.1
QL01p037830 Quercus lobata HOM05D000045 ORTHO05D000611 1.1e-12 76.6 62 62.9
Prupe.1G195600 Prunus persica HOM05D000045 ORTHO05D000611 2.5e-12 75.5 59 66.1
TAR633G0558 Trochodendron aralioides HOM05D000045 ORTHO05D000611 2.5e-12 75.5 59 64.4
Sabra07G0105200 Salix brachista HOM05D000045 ORTHO05D000611 3.3e-12 75.1 58 67.2
Potri.007G128700 Populus trichocarpa HOM05D000045 ORTHO05D000611 4.3e-12 74.7 60 66.7
TAR636G0377 Trochodendron aralioides HOM05D000045 ORTHO05D000611 1.2e-11 73.2 59 66.1
Peaxi162Scf01626g00002 Petunia axillaris HOM05D000045 ORTHO05D000611 1.6e-11 72.8 60 63.3
Rhsim13G0054300 Rhododendron simsii HOM05D000045 ORTHO05D000611 1.1e-07 60.1 57 54.4
TAR362G0325 Trochodendron aralioides HOM05D000045 ORTHO05D000611 1.1e-07 60.1 84 46.4
vmacro02833 Vaccinium macrocarpon HOM05D000045 ORTHO05D000611 1.4e-07 59.7 85 41.2
FvH4_2g17601 Fragaria vesca HOM05D000045 ORTHO05D000611 1.9e-07 59.3 83 43.4
Nitab4.5_0004983g0030 Nicotiana tabacum HOM05D000045 ORTHO05D000611 3.2e-07 58.5 64 48.4
Nitab4.5_0011171g0010 Nicotiana tabacum HOM05D000045 ORTHO05D000611 3.2e-07 58.5 64 48.4
Cpa.g.sc9.289 Carica papaya HOM05D000045 ORTHO05D000611 4.2e-07 58.2 57 50.9
Dinv10450 Davidia involucrata HOM05D000045 ORTHO05D000611 4.2e-07 58.2 83 43.4
RcHm_v2.0_Chr6g0282551 Rosa chinensis HOM05D000045 ORTHO05D000611 4.2e-07 58.2 83 43.4
Sp3g06410 Schrenkiella parvula HOM05D000045 ORTHO05D000611 7.1e-07 57.4 67 44.8
CiPaw.13G057700 Carya illinoinensis HOM05D000045 ORTHO05D000611 9.3e-07 57.0 83 41.0
Gohir.D07G167500 Gossypium hirsutum HOM05D000045 ORTHO05D000611 9.3e-07 57.0 85 40.0
Manes.13G055700 Manihot esculenta HOM05D000045 ORTHO05D000611 9.3e-07 57.0 83 42.2
FAN15G1153 Fragaria x ananassa HOM05D000045 ORTHO05D000611 1.2e-06 56.6 58 51.7
Gohir.A07G158900 Gossypium hirsutum HOM05D000045 ORTHO05D000611 1.2e-06 56.6 85 40.0
Potri.014G176500 Populus trichocarpa HOM05D000045 ORTHO05D000611 1.2e-06 56.6 83 42.2
Gorai.N002600 Gossypium raimondii HOM05D000045 ORTHO05D000611 1.6e-06 56.2 59 49.2
PSO832G3719 Papaver somniferum HOM05D000045 ORTHO05D000611 1.6e-06 56.2 72 43.1
PGR031G0375 Punica granatum HOM05D000045 ORTHO05D000611 1.6e-06 56.2 84 41.7
Sabra14G0135100 Salix brachista HOM05D000045 ORTHO05D000611 1.6e-06 56.2 83 42.2
Solyc06g073210.4 Solanum lycopersicum HOM05D000045 ORTHO05D000611 1.6e-06 56.2 64 42.2
Atru.chr4.1194 Acer truncatum HOM05D000045 ORTHO05D000611 2.1e-06 55.8 84 39.3
Aqoxy2G04102 Aquilegia oxysepala HOM05D000045 ORTHO05D000611 2.7e-06 55.5 70 47.1
Duzib133G0982 Durio zibethinus HOM05D000045 ORTHO05D000611 2.7e-06 55.5 83 41.0
Duzib138G0278 Durio zibethinus HOM05D000045 ORTHO05D000611 2.7e-06 55.5 83 41.0
Nn1g09619 Nelumbo nucifera HOM05D000045 ORTHO05D000611 2.7e-06 55.5 57 50.9
PSO675G5125 Papaver somniferum HOM05D000045 ORTHO05D000611 2.7e-06 55.5 53 50.9
PSO210G0918 Papaver somniferum HOM05D000045 ORTHO05D000611 3.5e-06 55.1 72 41.7
Rhsim09G0026800 Rhododendron simsii HOM05D000045 ORTHO05D000611 3.5e-06 55.1 63 49.2
TWI18G1009 Tripterygium wilfordii HOM05D000045 ORTHO05D000611 3.5e-06 55.1 84 42.9
Sopen06g029580 Solanum pennellii HOM05D000045 ORTHO05D000611 4.6e-06 54.7 64 40.6
TWI75G1823 Tripterygium wilfordii HOM05D000045 ORTHO05D000611 4.6e-06 54.7 57 52.6
Cpa.g.sc8.53 Carica papaya HOM05D000045 ORTHO05D000611 6.0e-06 54.3 83 39.8
COL.COLO4_07043 Corchorus olitorius HOM05D000045 ORTHO05D000611 6.0e-06 54.3 83 39.8
Nn1g09616 Nelumbo nucifera HOM05D000045 ORTHO05D000611 6.0e-06 54.3 61 49.2
TAR362G0617 Trochodendron aralioides HOM05D000045 ORTHO05D000611 6.0e-06 54.3 57 47.4
EL10Ac5g10594 Beta vulgaris HOM05D000045 ORTHO05D000611 7.8e-06 53.9 60 50.0
Prupe.8G188300 Prunus persica HOM05D000045 ORTHO05D000611 7.8e-06 53.9 83 41.0


User provided reference genes

Program Settings