Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018235 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.0e-66 255.8 144 100.0
CSS0004284 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.4e-59 232.3 160 83.8
CSS0029489 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 4.1e-59 231.5 160 76.2
CSS0035925 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 8.0e-55 217.2 131 90.1
CSS0050046 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.9e-52 208.8 149 81.9
CSS0008909 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.9e-48 196.1 131 77.1
Actinidia17264 Actinidia chinensis HOM05D006823 ORTHO05D008608 7.3e-40 167.5 160 65.6
FAN09G2832 Fragaria x ananassa HOM05D006823 ORTHO05D008608 4.7e-39 164.9 160 63.8
FvH4_6g22650 Fragaria vesca HOM05D006823 ORTHO05D008608 1.4e-38 163.3 161 64.6
Dinv24090 Davidia involucrata HOM05D006823 ORTHO05D008608 5.2e-38 161.4 160 63.1
Rhsim04G0097800 Rhododendron simsii HOM05D006823 ORTHO05D008608 6.8e-38 161.0 163 65.6
vmacro09107 Vaccinium macrocarpon HOM05D006823 ORTHO05D008608 6.8e-38 161.0 193 59.6
FAN02G3510 Fragaria x ananassa HOM05D006823 ORTHO05D008608 2.0e-37 159.5 161 64.0
FAN14G3816 Fragaria x ananassa HOM05D006823 ORTHO05D008608 2.0e-37 159.5 163 63.8
Thecc.05G168800 Theobroma cacao HOM05D006823 ORTHO05D008608 2.6e-37 159.1 161 65.2
FAN05G5147 Fragaria x ananassa HOM05D006823 ORTHO05D008608 4.4e-37 158.3 163 63.2
CsaV3_3G038970 Cucumis sativus L. HOM05D006823 ORTHO05D008608 5.8e-37 157.9 160 61.9
FAN14G5352 Fragaria x ananassa HOM05D006823 ORTHO05D008608 5.8e-37 157.9 163 63.8
Manes.08G045100 Manihot esculenta HOM05D006823 ORTHO05D008608 9.9e-37 157.1 162 63.6
ClCG10G017400 Citrullus lanatus HOM05D006823 ORTHO05D008608 1.3e-36 156.8 160 61.2
TWI74G0728 Tripterygium wilfordii HOM05D006823 ORTHO05D008608 1.3e-36 156.8 163 62.6
Glyma.02G177100 Glycine max HOM05D006823 ORTHO05D008608 2.9e-36 155.6 160 57.5
Atru.chr8.1064 Acer truncatum HOM05D006823 ORTHO05D008608 3.7e-36 155.2 160 61.2
MD14G1060400 Malus domestica HOM05D006823 ORTHO05D008608 4.9e-36 154.8 162 62.3
Nn7g36040 Nelumbo nucifera HOM05D006823 ORTHO05D008608 6.4e-36 154.5 160 60.0
Gohir.D09G123300 Gossypium hirsutum HOM05D006823 ORTHO05D008608 8.3e-36 154.1 161 64.0
Gorai.006G141900 Gossypium raimondii HOM05D006823 ORTHO05D008608 8.3e-36 154.1 161 64.0
Psat1g009680 Pisum sativum HOM05D006823 ORTHO05D008608 8.3e-36 154.1 160 56.2
GSVIVG01033521001 Vitis vinifera HOM05D006823 ORTHO05D008608 1.1e-35 153.7 162 61.1
Sed0007671 Sechium edule HOM05D006823 ORTHO05D008608 1.4e-35 153.3 161 62.1
Ciclev10012490m.g Citrus clementina HOM05D006823 ORTHO05D008608 1.9e-35 152.9 160 60.6
Duzib093G0556 Durio zibethinus HOM05D006823 ORTHO05D008608 2.4e-35 152.5 162 63.6
Lsat_1_v5_gn_8_75541 Lactuca sativa HOM05D006823 ORTHO05D008608 3.2e-35 152.1 161 60.9
CSS0004878 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 7.1e-35 151.0 102 80.4
CSS0021268 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 7.1e-35 151.0 102 80.4
Medtr1g053570 Medicago truncatula HOM05D006823 ORTHO05D008608 9.2e-35 150.6 160 50.6
Prupe.7G074100 Prunus persica HOM05D006823 ORTHO05D008608 9.2e-35 150.6 164 60.4
CANSAT64G2950 Cannabis sativa HOM05D006823 ORTHO05D008608 1.6e-34 149.8 165 60.6
Phvul.007G258100 Phaseolus vulgaris HOM05D006823 ORTHO05D008608 2.1e-34 149.4 160 57.5
Hund19193 Selenicereus undatus HOM05D006823 ORTHO05D008608 2.1e-34 149.4 165 58.8
arahy.Tifrunner.gnm1.ann1.DD58DK Arachis hypogaea HOM05D006823 ORTHO05D008608 2.7e-34 149.1 160 56.2
arahy.Tifrunner.gnm1.ann1.F8HZ0X Arachis hypogaea HOM05D006823 ORTHO05D008608 2.7e-34 149.1 160 56.2
Glyma.10G091300 Glycine max HOM05D006823 ORTHO05D008608 3.5e-34 148.7 160 51.9
Lj5g0012941 Lotus japonicus HOM05D006823 ORTHO05D008608 3.5e-34 148.7 160 59.4
EL10Ac3g06941 Beta vulgaris HOM05D006823 ORTHO05D008608 4.6e-34 148.3 168 57.1
HanXRQChr05g0132841 Helianthus annuus HOM05D006823 ORTHO05D008608 4.6e-34 148.3 160 60.6
Ca_12095_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 7.8e-34 147.5 161 55.3
Potri.016G048600 Populus trichocarpa HOM05D006823 ORTHO05D008608 7.8e-34 147.5 161 60.2
arahy.Tifrunner.gnm1.ann1.R1CCT6 Arachis hypogaea HOM05D006823 ORTHO05D008608 1.0e-33 147.1 160 56.2
CiPaw.09G031900 Carya illinoinensis HOM05D006823 ORTHO05D008608 1.7e-33 146.4 162 61.1
THA.LOC104802464 Tarenaya hassleriana HOM05D006823 ORTHO05D008608 1.7e-33 146.4 163 60.7
TPR.G24279 Trifolium pratense HOM05D006823 ORTHO05D008608 1.7e-33 146.4 160 48.8
Carub.0005s2475 Capsella rubella HOM05D006823 ORTHO05D008608 3.9e-33 145.2 163 52.1
CARHR168210 Cardamine hirsuta HOM05D006823 ORTHO05D008608 3.9e-33 145.2 163 56.4
DCAR_013557 Daucus carota HOM05D006823 ORTHO05D008608 6.6e-33 144.4 162 58.6
RcHm_v2.0_Chr3g0480211 Rosa chinensis HOM05D006823 ORTHO05D008608 8.6e-33 144.1 162 58.6
Ca_26114_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 1.5e-32 143.3 161 54.7
AL5G39560 Arabidopsis lyrata HOM05D006823 ORTHO05D008608 5.6e-32 141.4 163 56.4
BcaB02g07567 Brassica carinata HOM05D006823 ORTHO05D008608 7.3e-32 141.0 164 56.1
COL.COLO4_36138 Corchorus olitorius HOM05D006823 ORTHO05D008608 9.5e-32 140.6 160 53.1
AT3G57910 Arabidopsis thaliana HOM05D006823 ORTHO05D008608 1.2e-31 140.2 163 55.8
Lalb_Chr10g0091151 Lupinus albus HOM05D006823 ORTHO05D008608 1.6e-31 139.8 160 51.9
A07p23720 Brassica napus HOM05D002947 ORTHO05D003447 2.8e-31 139.0 165 56.4
MBI01_g24371_MAGBIO Magnolia biondii HOM05D006823 ORTHO05D008608 2.8e-31 139.0 162 57.4
Sp5g04810 Schrenkiella parvula HOM05D006823 ORTHO05D008608 2.8e-31 139.0 163 56.4
CDE04G3233 Ceratophyllum demersum HOM05D006823 ORTHO05D008608 3.6e-31 138.7 161 59.0
BraA07t30025Z Brassica rapa HOM05D006823 ORTHO05D008608 6.2e-31 137.9 165 55.8
BcaC08g44877 Brassica carinata HOM05D006823 ORTHO05D008608 8.1e-31 137.5 164 55.5
BolC6t37647H Brassica oleracea HOM05D002947 ORTHO05D003447 8.1e-31 137.5 164 55.5
Aa31LG10G12620 Aethionema arabicum HOM05D006823 ORTHO05D008608 1.1e-30 137.1 157 57.3
C06p24950 Brassica napus HOM05D002947 ORTHO05D003447 1.1e-30 137.1 164 55.5
PSO384G3045 Papaver somniferum HOM05D006823 ORTHO05D008608 1.4e-30 136.7 160 53.1
Sabra16G0052300 Salix brachista HOM05D006823 ORTHO05D008608 1.8e-30 136.3 161 57.1
Thhalv10006171m.g Eutrema salsugineum HOM05D006823 ORTHO05D008608 3.1e-30 135.6 163 55.2
Sopen11g025160 Solanum pennellii HOM05D006823 ORTHO05D008608 6.8e-30 134.4 161 55.3
PSO339G6540 Papaver somniferum HOM05D006823 ORTHO05D008608 8.9e-30 134.0 162 53.7
Solyc11g065380.2 Solanum lycopersicum HOM05D006823 ORTHO05D008608 8.9e-30 134.0 161 55.3
MSTRG.19895 Avicennia marina HOM05D006823 ORTHO05D008608 1.5e-29 133.3 161 55.3
PGSC0003DMG401029997 Solanum tuberosum HOM05D006823 ORTHO05D008608 2.0e-29 132.9 161 54.7
Eucgr.K01827 Eucalyptus grandis HOM05D006823 ORTHO05D008608 3.4e-29 132.1 164 57.9
ECA236G4823 Erigeron canadensis HOM05D006823 ORTHO05D000001 9.2e-27 124.0 153 55.6
Lj2A371G33 Lonicera japonica HOM05D006823 ORTHO05D008608 1.3e-25 120.2 160 56.2
ATR0605G325 Amborella trichopoda HOM05D006823 ORTHO05D008608 1.7e-25 119.8 164 54.9
SGA_v2.0_scaffold69G23076 Striga asiatica HOM05D006823 ORTHO05D008608 2.3e-25 119.4 181 47.5
Migut.J01822 Erythranthe guttata HOM05D006823 ORTHO05D008608 5.1e-25 118.2 171 50.9
TAR623G1194 Trochodendron aralioides HOM05D006823 ORTHO05D008608 5.1e-25 118.2 158 57.0
unitig_26.g9037 Utricularia gibba HOM05D006823 ORTHO05D008608 3.3e-24 115.5 160 50.0
Nitab4.5_0003572g0020 Nicotiana tabacum HOM05D006823 ORTHO05D008608 4.0e-22 108.6 144 56.2
SEGI_05037 Sequoiadendron giganteum HOM05D006823 ORTHO05D008608 4.0e-22 108.6 164 40.9
Sc25g0005140 Simmondsia chinensis HOM05D006823 ORTHO05D008608 4.0e-22 108.6 162 51.2
arahy.Tifrunner.gnm1.ann1.R3LTDD Arachis hypogaea HOM05D006823 ORTHO05D008608 5.2e-22 108.2 137 53.3
Haze_19965 Corylus avellana HOM05D006823 ORTHO05D008608 5.2e-22 108.2 160 54.4
Nitab4.5_0000016g0280 Nicotiana tabacum HOM05D006823 ORTHO05D008608 6.9e-22 107.8 143 55.9
AUR62024323 Chenopodium quinoa HOM05D006823 ORTHO05D008608 2.0e-21 106.3 161 42.2
HPP92_015470 Vanilla planifolia HOM05D006823 ORTHO05D008608 5.8e-21 104.8 163 49.1
CAN.G717.3 Capsicum annuum HOM05D006823 ORTHO05D008608 1.3e-20 103.6 140 53.6
AUR62012062 Chenopodium quinoa HOM05D006823 ORTHO05D008608 2.2e-20 102.8 141 44.0
arahy.Tifrunner.gnm1.ann1.HB0B2V Arachis hypogaea HOM05D006823 ORTHO05D008608 3.8e-20 102.1 160 47.5
Zm00001eb035020 Zea mays HOM05D006823 ORTHO05D008608 9.3e-19 97.4 162 39.5
Os08g0509500 Oryza sativa ssp. japonica HOM05D006823 ORTHO05D008608 1.0e-17 94.0 115 57.4
MELO3C009640.2 Cucumis melo HOM05D006823 ORTHO05D008608 1.7e-17 93.2 101 59.4
Gohir.A09G127050 Gossypium hirsutum HOM05D006823 ORTHO05D008608 3.3e-16 89.0 102 52.9
Mapoly0104s0025 Marchantia polymorpha HOM05D006823 ORTHO05D008608 1.1e-14 84.0 174 35.1
Cc00_g14630 Coffea canephora HOM05D006823 ORTHO05D008608 1.4e-14 83.6 160 44.4
Zm00001eb106730 Zea mays HOM05D006823 ORTHO05D008608 1.8e-14 83.2 115 41.7
VMungo0720G1016 Vigna mungo HOM05D006823 ORTHO05D008608 1.2e-13 80.5 102 44.1
arahy.Tifrunner.gnm1.ann1.ZK4YW6 Arachis hypogaea HOM05D006823 ORTHO05D008608 2.2e-12 76.3 89 51.7
Pp3c21_14790 Physcomitrium patens HOM05D006823 ORTHO05D008608 9.3e-11 70.9 186 39.2
Aqoxy1G00161 Aquilegia oxysepala HOM05D006823 ORTHO05D008608 1.2e-10 70.5 97 43.3
Cpa.g.sc85.85 Carica papaya HOM05D006823 ORTHO05D008608 3.5e-10 68.9 45 66.7
Peaxi162Scf00258g00118 Petunia axillaris HOM05D006823 ORTHO05D008608 5.6e-08 61.6 57 54.4
AagrBONN_evm.TU.Sc2ySwM_369.80 Anthoceros agrestis HOM05D006823 ORTHO05D008608 2.4e-06 56.2 163 36.2


User provided reference genes

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