Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018209 Camellia sinensis var. sinensis HOM05D014904 ORTHO05D110346 4.5e-67 257.7 122 100.0
CSS0005881 Camellia sinensis var. sinensis HOM05D014904 ORTHO05D112126 1.5e-65 252.7 122 98.4
CSS0019387 Camellia sinensis var. sinensis HOM05D014904 ORTHO05D109185 1.5e-65 252.7 122 98.4
CSS0019589 Camellia sinensis var. sinensis HOM05D014904 ORTHO05D113188 1.5e-65 252.7 122 98.4
CSS0013016 Camellia sinensis var. sinensis HOM05D014904 ORTHO05D110834 1.9e-65 252.3 122 97.5
CSS0014138 Camellia sinensis var. sinensis HOM05D014904 ORTHO05D109930 4.2e-65 251.1 122 97.5
CSS0015043 Camellia sinensis var. sinensis HOM05D014904 ORTHO05D109290 4.2e-65 251.1 122 97.5
CSS0018219 Camellia sinensis var. sinensis HOM05D014904 ORTHO05D111806 5.5e-65 250.8 122 97.5
CSS0007421 Camellia sinensis var. sinensis HOM05D014904 ORTHO05D113310 9.5e-65 250.0 122 96.7
CSS0029550 Camellia sinensis var. sinensis HOM05D014904 ORTHO05D110287 1.6e-64 249.2 122 96.7
Sabra18G0030900 Salix brachista HOM05D000037 ORTHO05D002477 4.9e-21 104.8 56 82.1
Oeu047071.5 Olea europaea HOM05D000250 ORTHO05D002477 3.9e-18 95.1 56 76.8
EL10Ac2g04241 Beta vulgaris HOM05D000250 ORTHO05D002477 2.1e-11 72.8 56 62.5
Hund25786 Selenicereus undatus HOM05D000250 ORTHO05D002477 4.3e-09 65.1 37 75.7
Nitab4.5_0008357g0020 Nicotiana tabacum HOM05D000250 ORTHO05D002477 4.8e-08 61.6 42 69.0
Nitab4.5_0000268g0020 Nicotiana tabacum HOM05D000250 ORTHO05D002477 1.1e-07 60.5 32 87.5
BolC2t06447H Brassica oleracea HOM05D000250 ORTHO05D002477 4.0e-07 58.5 39 71.8
BolC9t59390H Brassica oleracea HOM05D000250 ORTHO05D002477 5.3e-07 58.2 45 64.4
BolC9t59391H Brassica oleracea HOM05D000250 ORTHO05D002477 5.3e-07 58.2 45 64.4
BraA02t05071Z Brassica rapa HOM05D000250 ORTHO05D002477 6.9e-07 57.8 46 63.0
Lalb_Chr08g0244031 Lupinus albus HOM05D000250 ORTHO05D002477 1.2e-06 57.0 29 89.7
BcaC03g13355 Brassica carinata HOM05D000250 ORTHO05D002477 2.6e-06 55.8 34 76.5
Lalb_Chr11g0063801 Lupinus albus HOM05D000250 ORTHO05D002477 4.5e-06 55.1 29 86.2
C02p04890 Brassica napus HOM05D000250 ORTHO05D002477 1.0e-05 53.9 36 69.4


User provided reference genes

Program Settings