Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018208 Camellia sinensis var. sinensis HOM05D003641 ORTHO05D004915 5.6e-187 657.5 347 100.0
vmacro07894 Vaccinium macrocarpon HOM05D003641 ORTHO05D004915 8.4e-159 563.9 349 83.4
Dinv24057 Davidia involucrata HOM05D003641 ORTHO05D004915 4.2e-158 561.6 353 83.3
Rhsim03G0004900 Rhododendron simsii HOM05D003641 ORTHO05D004915 4.2e-158 561.6 352 81.2
Hma1.2p1_0676F.1_g201930 Hydrangea macrophylla HOM05D003641 ORTHO05D004915 3.5e-157 558.5 349 82.8
TWI74G1529 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 7.9e-157 557.4 347 76.7
Lj2A365T90 Lonicera japonica HOM05D003641 ORTHO05D004915 3.9e-156 555.1 349 78.2
Lju124A24T32 Lonicera japonica HOM05D003641 ORTHO05D004915 1.1e-155 553.5 347 79.5
HanXRQChr01g0010591 Helianthus annuus HOM05D003641 ORTHO05D004915 1.5e-155 553.1 352 78.7
CANSAT64G0207 Cannabis sativa HOM05D003641 ORTHO05D004915 1.3e-154 550.1 359 77.2
Cc06_g15710 Coffea canephora HOM05D003641 ORTHO05D004915 1.6e-154 549.7 353 81.9
Manes.08G042800 Manihot esculenta HOM05D003641 ORTHO05D004915 1.6e-154 549.7 349 74.8
Haze_20012 Corylus avellana HOM05D003641 ORTHO05D004915 2.1e-154 549.3 350 74.9
Cfa020150 Carpinus fangiana HOM05D003641 ORTHO05D004915 6.2e-154 547.7 350 74.6
Manes.09G037400 Manihot esculenta HOM05D003641 ORTHO05D004915 1.1e-153 547.0 349 74.8
TWI53G2154 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 1.1e-153 547.0 348 75.6
CiPaw.09G029000 Carya illinoinensis HOM05D003641 ORTHO05D004915 2.4e-153 545.8 352 75.9
Lsat_1_v5_gn_5_164500 Lactuca sativa HOM05D003641 ORTHO05D004915 2.0e-152 542.7 342 79.8
RcHm_v2.0_Chr3g0479291 Rosa chinensis HOM05D003641 ORTHO05D004915 4.5e-152 541.6 351 79.5
PGR004G2452 Punica granatum HOM05D003641 ORTHO05D004915 5.8e-152 541.2 354 77.7
Atru.chr8.1148 Acer truncatum HOM05D003641 ORTHO05D004915 1.0e-151 540.4 355 74.4
FvH4_6g21990 Fragaria vesca HOM05D003641 ORTHO05D004915 2.2e-151 539.3 348 72.7
FAN05G2657 Fragaria x ananassa HOM05D003641 ORTHO05D004915 2.2e-151 539.3 349 77.7
FAN14G0097 Fragaria x ananassa HOM05D003641 ORTHO05D004915 2.2e-151 539.3 348 72.7
Duzib093G1627 Durio zibethinus HOM05D003641 ORTHO05D004915 2.9e-151 538.9 353 74.2
MD14G1054700 Malus domestica HOM05D003641 ORTHO05D004915 2.9e-151 538.9 350 72.9
COL.COLO4_29349 Corchorus olitorius HOM05D003641 ORTHO05D004915 3.8e-151 538.5 352 78.7
Prupe.7G080100 Prunus persica HOM05D003641 ORTHO05D004915 3.8e-151 538.5 354 78.0
FAN02G1826 Fragaria x ananassa HOM05D003641 ORTHO05D004915 4.9e-151 538.1 347 75.5
FAN09G3507 Fragaria x ananassa HOM05D003641 ORTHO05D004915 4.9e-151 538.1 349 77.4
Potri.006G194400 Populus trichocarpa HOM05D003641 ORTHO05D004915 4.9e-151 538.1 347 73.8
Sabra06G0149100 Salix brachista HOM05D003641 ORTHO05D004915 6.5e-151 537.7 347 73.5
MD12G1055300 Malus domestica HOM05D003641 ORTHO05D004915 8.4e-151 537.3 351 77.8
Eucgr.A02465 Eucalyptus grandis HOM05D003641 ORTHO05D004915 1.1e-150 537.0 358 77.7
DCAR_017036 Daucus carota HOM05D003641 ORTHO05D004915 1.4e-150 536.6 351 72.9
Thecc.05G174300 Theobroma cacao HOM05D003641 ORTHO05D004915 1.4e-150 536.6 353 75.1
PGSC0003DMG400011447 Solanum tuberosum HOM05D003641 ORTHO05D004915 1.9e-150 536.2 352 71.9
Ciclev10012043m.g Citrus clementina HOM05D003641 ORTHO05D004915 2.5e-150 535.8 361 71.5
QL07p024293 Quercus lobata HOM05D003641 ORTHO05D004915 2.5e-150 535.8 365 77.8
CAN.G960.10 Capsicum annuum HOM05D003641 ORTHO05D004915 3.2e-150 535.4 355 72.1
CsaV3_3G038670 Cucumis sativus L. HOM05D003641 ORTHO05D004915 9.3e-150 533.9 353 73.9
TAR633G0428 Trochodendron aralioides HOM05D003641 ORTHO05D004915 1.2e-149 533.5 347 72.6
SalBow6G5303 Salvia bowleyana HOM05D003641 ORTHO05D004915 7.9e-149 530.8 353 73.9
Solyc10g078930.2 Solanum lycopersicum HOM05D003641 ORTHO05D004915 7.9e-149 530.8 352 71.0
Oeu063867.1 Olea europaea HOM05D003641 ORTHO05D004915 1.0e-148 530.4 349 72.5
Sabra16G0062900 Salix brachista HOM05D003641 ORTHO05D004915 1.0e-148 530.4 348 73.3
Gorai.012G099600 Gossypium raimondii HOM05D003641 ORTHO05D004915 1.8e-148 529.6 355 71.0
Nitab4.5_0007274g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.8e-148 529.6 350 72.0
TAR636G0728 Trochodendron aralioides HOM05D003641 ORTHO05D004915 2.3e-148 529.3 347 71.2
ECA248G0025 Erigeron canadensis HOM05D003641 ORTHO05D004915 3.0e-148 528.9 349 72.2
Sopen10g029550 Solanum pennellii HOM05D003641 ORTHO05D004915 3.9e-148 528.5 352 70.2
MELO3C009611.2 Cucumis melo HOM05D003641 ORTHO05D004915 5.1e-148 528.1 353 75.4
Gohir.D04G089500 Gossypium hirsutum HOM05D003641 ORTHO05D004915 5.1e-148 528.1 355 70.7
Gohir.A04G051900 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.5e-147 526.6 355 71.3
THA.LOC104826776 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 2.5e-147 525.8 355 75.8
Potri.016G060100 Populus trichocarpa HOM05D003641 ORTHO05D004915 4.3e-147 525.0 355 74.4
Duzib128G0491 Durio zibethinus HOM05D003641 ORTHO05D004915 5.7e-147 524.6 353 71.1
Migut.J01850 Erythranthe guttata HOM05D003641 ORTHO05D004915 5.7e-147 524.6 357 77.6
MBI19_g17419_MAGBIO Magnolia biondii HOM05D003641 ORTHO05D004915 5.7e-147 524.6 347 70.3
Aa31sc80G90 Aethionema arabicum HOM05D003641 ORTHO05D004915 7.4e-147 524.2 360 69.4
Sc13g0002360 Simmondsia chinensis HOM05D003641 ORTHO05D004915 7.4e-147 524.2 349 71.6
Sed0007356 Sechium edule HOM05D003641 ORTHO05D004915 1.3e-146 523.5 352 75.0
SGA_v2.0_scaffold105G30499 Striga asiatica HOM05D003641 ORTHO05D004915 1.3e-146 523.5 356 71.9
SGA_v2.0_scaffold69G23056 Striga asiatica HOM05D003641 ORTHO05D004915 1.3e-146 523.5 355 78.6
Cpa.g.sc85.60 Carica papaya HOM05D003641 ORTHO05D004915 1.6e-146 523.1 355 73.5
ClCG10G017650 Citrullus lanatus HOM05D003641 ORTHO05D004915 1.6e-146 523.1 352 71.0
CiPaw.10G025600 Carya illinoinensis HOM05D003641 ORTHO05D004915 2.8e-146 522.3 351 69.8
Thhalv10021006m.g Eutrema salsugineum HOM05D003641 ORTHO05D004915 2.8e-146 522.3 360 75.3
VMungo1383G0826 Vigna mungo HOM05D003641 ORTHO05D004915 2.8e-146 522.3 357 76.5
BcaB06g25550 Brassica carinata HOM05D003641 ORTHO05D004915 1.4e-145 520.0 349 70.8
A05p37290 Brassica napus HOM05D003641 ORTHO05D004915 3.1e-145 518.8 351 70.7
AL3G23660 Arabidopsis lyrata HOM05D003641 ORTHO05D004915 4.1e-145 518.5 361 68.1
BraA05t22525Z Brassica rapa HOM05D003641 ORTHO05D004915 9.0e-145 517.3 351 70.4
Glyma.03G146100 Glycine max HOM05D003641 ORTHO05D004915 9.0e-145 517.3 357 74.5
AT3G12050 Arabidopsis thaliana HOM05D003641 ORTHO05D004915 1.2e-144 516.9 361 67.9
CARHR086620 Cardamine hirsuta HOM05D003641 ORTHO05D004915 1.2e-144 516.9 360 68.1
C05p55760 Brassica napus HOM05D003641 ORTHO05D004915 1.5e-144 516.5 350 70.3
Peaxi162Scf00258g00921 Petunia axillaris HOM05D003641 ORTHO05D004915 2.0e-144 516.2 353 70.3
Phvul.001G143800 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 2.0e-144 516.2 361 74.0
Sp3g10280 Schrenkiella parvula HOM05D003641 ORTHO05D004915 2.6e-144 515.8 360 69.4
MSTRG.19915 Avicennia marina HOM05D003641 ORTHO05D004915 3.4e-144 515.4 355 74.9
Oeu006209.1 Olea europaea HOM05D003641 ORTHO05D004915 1.7e-143 513.1 364 68.1
Psat3g067000 Pisum sativum HOM05D003641 ORTHO05D004915 3.8e-143 511.9 355 68.2
THA.LOC104809934 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 3.8e-143 511.9 352 75.0
Aqoxy1G00140 Aquilegia oxysepala HOM05D003641 ORTHO05D004915 5.0e-143 511.5 356 72.8
Ca_08533_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 5.0e-143 511.5 359 67.7
Glyma.19G149300 Glycine max HOM05D003641 ORTHO05D004915 5.0e-143 511.5 355 75.2
arahy.Tifrunner.gnm1.ann1.86C462 Arachis hypogaea HOM05D003641 ORTHO05D004915 1.1e-142 510.4 360 73.1
Carub.0003s1139 Capsella rubella HOM05D003641 ORTHO05D004915 1.4e-142 510.0 363 73.8
arahy.Tifrunner.gnm1.ann1.G8NWJQ Arachis hypogaea HOM05D003641 ORTHO05D004915 2.5e-142 509.2 360 72.5
Lj5g0013930 Lotus japonicus HOM05D003641 ORTHO05D004915 5.5e-142 508.1 358 74.0
Medtr7g093500 Medicago truncatula HOM05D003641 ORTHO05D004915 7.2e-142 507.7 355 71.8
Hund24813 Selenicereus undatus HOM05D003641 ORTHO05D004915 7.2e-142 507.7 351 67.8
Ca_12045_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 9.4e-142 507.3 350 69.4
AUR62015343 Chenopodium quinoa HOM05D003641 ORTHO05D004915 2.1e-141 506.1 347 69.5
ATR0598G178 Amborella trichopoda HOM05D003641 ORTHO05D004915 3.0e-140 502.3 348 67.5
unitig_899.g15167 Utricularia gibba HOM05D003641 ORTHO05D004915 3.0e-140 502.3 349 71.9
Lalb_Chr18g0047991 Lupinus albus HOM05D003641 ORTHO05D004915 3.9e-140 501.9 358 72.9
TPR.G30301 Trifolium pratense HOM05D003641 ORTHO05D004915 3.9e-140 501.9 350 75.1
Lj1g0002782 Lotus japonicus HOM05D003641 ORTHO05D004915 6.7e-140 501.1 347 67.7
CDE05G2508 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 1.1e-139 500.4 349 67.6
EL10Ac3g06892 Beta vulgaris HOM05D003641 ORTHO05D004915 1.5e-139 500.0 347 70.6
AUR62011998 Chenopodium quinoa HOM05D003641 ORTHO05D004915 3.3e-139 498.8 354 66.9
CDE11G0833 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 4.3e-139 498.4 349 67.6
Nitab4.5_0000105g0210 Nicotiana tabacum HOM05D003641 ORTHO05D004915 9.7e-139 497.3 348 69.8
BolC5t34243H Brassica oleracea HOM05D003641 ORTHO05D004915 2.8e-138 495.7 393 62.6
Nitab4.5_0002343g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 4.8e-138 495.0 355 68.7
Nitab4.5_0001137g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 6.3e-138 494.6 351 68.9
PSO135G0566 Papaver somniferum HOM05D003641 ORTHO05D004915 1.3e-135 486.9 355 66.5
PSO724G0609 Papaver somniferum HOM05D003641 ORTHO05D004915 2.2e-135 486.1 358 66.2
Medtr0136s0060 Medicago truncatula HOM05D003641 ORTHO05D004915 8.5e-135 484.2 348 66.4
HPP92_005766 Vanilla planifolia HOM05D003641 ORTHO05D004915 7.9e-133 477.6 364 63.2
Zm00001eb037640 Zea mays HOM05D003641 ORTHO05D004915 1.0e-132 477.2 357 64.7
Phvul.007G261100 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 3.0e-132 475.7 352 67.0
Glyma.02G171100 Glycine max HOM05D003641 ORTHO05D004915 5.1e-132 474.9 351 69.5
Glyma.09G109200 Glycine max HOM05D003641 ORTHO05D004915 1.5e-131 473.4 349 64.2
Os08g0464000 Oryza sativa ssp. japonica HOM05D003641 ORTHO05D004915 2.6e-131 472.6 359 69.1
unitig_746.g26803 Utricularia gibba HOM05D003641 ORTHO05D004915 4.4e-131 471.9 334 68.0
Hund19209 Selenicereus undatus HOM05D003641 ORTHO05D004915 1.7e-130 469.9 351 63.5
Ah.04g152830 Amaranthus hybridus HOM05D003641 ORTHO05D004915 3.7e-130 468.8 332 66.3
VMungo0720G0815 Vigna mungo HOM05D003641 ORTHO05D004915 6.3e-130 468.0 353 66.6
HPP92_009321 Vanilla planifolia HOM05D003641 ORTHO05D004915 1.1e-129 467.2 361 62.0
BcaC05g29294 Brassica carinata HOM05D003641 ORTHO05D004915 2.6e-128 462.6 350 64.6
Zm00001eb177410 Zea mays HOM05D003641 ORTHO05D004915 3.5e-128 462.2 356 62.4
Pp3c9_15400 Physcomitrium patens HOM05D003641 ORTHO05D004915 4.7e-125 451.8 353 60.6
Pp3c15_21400 Physcomitrium patens HOM05D003641 ORTHO05D004915 6.1e-125 451.4 353 60.6
Mapoly0109s0023 Marchantia polymorpha HOM05D003641 ORTHO05D004915 4.8e-122 441.8 351 61.0
Nn7g35972 Nelumbo nucifera HOM05D003641 ORTHO05D004915 3.1e-121 439.1 301 75.7
SMO203G0054 Selaginella moellendorffii HOM05D003641 ORTHO05D004915 5.3e-121 438.3 348 59.2
AagrBONN_evm.TU.Sc2ySwM_344.3694 Anthoceros agrestis HOM05D003641 ORTHO05D004915 2.0e-120 436.4 348 60.1
Actinidia22049 Actinidia chinensis HOM05D003641 ORTHO05D004915 1.8e-116 423.3 348 65.5
Nn7g35971 Nelumbo nucifera HOM05D003641 ORTHO05D004915 2.2e-114 416.4 285 70.2
Actinidia14376 Actinidia chinensis HOM05D003641 ORTHO05D004915 1.5e-110 403.7 322 69.9
Psat6g123080 Pisum sativum HOM05D003641 ORTHO05D004915 4.2e-110 402.1 292 69.9
GSVIVG01033476001 Vitis vinifera HOM05D003641 ORTHO05D004915 7.0e-105 384.8 349 57.3
TPR.G35793 Trifolium pratense HOM05D003641 ORTHO05D004915 7.2e-102 374.8 290 62.4
Gorai.012G099500 Gossypium raimondii HOM05D003641 ORTHO05D004915 2.8e-101 372.9 327 58.1
PRCOL_00005901 Prasinoderma coloniale HOM05D003641 ORTHO05D004915 3.4e-75 286.2 349 45.8
Gohir.D04G089400 Gossypium hirsutum HOM05D003641 ORTHO05D004915 2.9e-74 283.1 213 66.7
SEGI_39925 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 1.7e-71 273.9 272 52.6
BcaC09g48210 Brassica carinata HOM05D003641 ORTHO05D004915 5.8e-67 258.8 240 57.9
Gohir.A04G052026 Gossypium hirsutum HOM05D003641 ORTHO05D004915 8.4e-66 255.0 156 74.4
Cre03.g199300 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D004915 2.1e-61 240.4 356 43.3
MCO07G236 Micromonas commoda HOM05D003641 ORTHO05D004915 3.6e-61 239.6 348 39.1
Gohir.A04G052000 Gossypium hirsutum HOM05D003641 ORTHO05D004915 5.4e-57 225.7 175 65.1
Actinidia32404 Actinidia chinensis HOM05D003641 ORTHO05D004915 1.7e-55 220.7 115 89.6
arahy.Tifrunner.gnm1.ann1.VQQW03 Arachis hypogaea HOM05D003641 ORTHO05D004915 1.8e-52 210.7 126 77.8
arahy.Tifrunner.gnm1.ann1.EPN7T6 Arachis hypogaea HOM05D003641 ORTHO05D004915 5.3e-52 209.1 123 75.6
HanXRQChr03g0083061 Helianthus annuus HOM05D003641 ORTHO05D004915 2.9e-34 150.2 138 55.1
Ca_31327_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.4e-33 147.9 85 74.1
Ca_14569_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 3.2e-33 146.7 85 74.1
SEGI_05882 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 4.2e-33 146.4 197 41.6
Ca_20435_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 7.1e-33 145.6 85 72.9
Glyma.09G095600 Glycine max HOM05D003641 ORTHO05D004915 3.5e-32 143.3 130 71.5
Ca_09720_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.8e-31 141.0 85 70.6
Hund07686 Selenicereus undatus HOM05D003641 ORTHO05D011049 4.1e-28 129.8 182 41.2
arahy.Tifrunner.gnm1.ann1.20Y790 Arachis hypogaea HOM05D003641 ORTHO05D004915 3.4e-27 126.7 106 59.4
Dinv18651 Davidia involucrata HOM05D003641 ORTHO05D004915 6.7e-23 112.5 63 82.5
Dinv18648 Davidia involucrata HOM05D003641 ORTHO05D004915 7.4e-22 109.0 58 86.2
Dinv26263 Davidia involucrata HOM05D003641 ORTHO05D004915 7.4e-22 109.0 58 86.2
Hund07687 Selenicereus undatus HOM05D003641 ORTHO05D021213 4.8e-21 106.3 186 37.1
Ca_12039_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.1e-20 105.1 58 82.8
MCO11G399 Micromonas commoda HOM05D003641 ORTHO05D044219 7.7e-19 99.0 148 35.1
arahy.Tifrunner.gnm1.ann1.XYD4PT Arachis hypogaea HOM05D003641 ORTHO05D038899 5.0e-18 96.3 64 68.8
Nn8g39306 Nelumbo nucifera HOM05D003641 ORTHO05D004915 3.2e-17 93.6 60 75.0
Ca_03268_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 7.2e-17 92.4 59 71.2
EL10Ac8g19334 Beta vulgaris HOM05D003641 ORTHO05D027013 9.4e-17 92.0 75 54.7
TWI14G1341 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 3.6e-16 90.1 80 60.0
CBR_g18730 Chara braunii HOM05D003641 ORTHO05D004915 1.0e-15 88.6 55 74.5
Cre08.g358539 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D044219 1.0e-15 88.6 149 32.2
Ca_20824_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 7.4e-14 82.4 38 84.2
BolC1t05367H Brassica oleracea HOM05D003641 ORTHO05D038899 1.7e-13 81.3 49 71.4
SGA_v2.0_scaffold200G41266 Striga asiatica HOM05D037212 ORTHO05D027013 4.8e-13 79.7 73 56.2
PGSC0003DMG400035352 Solanum tuberosum HOM05D003641 ORTHO05D004915 9.1e-12 75.5 82 48.8
VMungo0464G0530 Vigna mungo HOM05D003641 ORTHO05D004915 4.5e-11 73.2 64 48.4
Peaxi162Scf00003g04539 Petunia axillaris HOM05D000312 ORTHO05D000221 8.5e-10 68.9 87 44.8
CsaV3_5G015400 Cucumis sativus L. HOM05D003641 ORTHO05D004915 1.1e-09 68.6 50 62.0
SGA_v2.0_scaffold196G40950 Striga asiatica HOM05D003641 ORTHO05D403144 1.9e-09 67.8 53 58.5
Sopen02g001110 Solanum pennellii HOM05D003641 ORTHO05D004915 4.0e-07 60.1 94 42.6
PRCOL_00004577 Prasinoderma coloniale HOM05D003641 ORTHO05D049026 1.5e-06 58.2 158 24.7
MCO13G471 Micromonas commoda HOM05D003641 ORTHO05D049026 2.0e-06 57.8 172 27.9


User provided reference genes

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