Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018179 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D008041 2.8e-52 208.4 109 100.0
Actinidia32214 Actinidia chinensis HOM05D002674 ORTHO05D008041 2.3e-38 162.2 109 78.0
Rhsim13G0010400 Rhododendron simsii HOM05D002674 ORTHO05D008041 7.5e-37 157.1 125 70.4
Dinv19696 Davidia involucrata HOM05D002674 ORTHO05D008041 2.8e-36 155.2 109 76.1
MSTRG.21632 Avicennia marina HOM05D002674 ORTHO05D008041 6.3e-36 154.1 104 76.0
PGSC0003DMG400011376 Solanum tuberosum HOM05D002674 ORTHO05D008041 6.3e-36 154.1 104 75.0
Lalb_Chr21g0306851 Lupinus albus HOM05D002674 ORTHO05D008041 8.2e-36 153.7 104 76.0
Peaxi162Scf00001g00445 Petunia axillaris HOM05D002674 ORTHO05D008041 8.2e-36 153.7 104 76.0
CAN.G472.1 Capsicum annuum HOM05D002674 ORTHO05D008041 1.8e-35 152.5 104 75.0
SalBow3G0298 Salvia bowleyana HOM05D002674 ORTHO05D008041 1.8e-35 152.5 103 76.7
SGA_v2.0_scaffold2G01395 Striga asiatica HOM05D002674 ORTHO05D008041 2.4e-35 152.1 102 75.5
TAR636G2182 Trochodendron aralioides HOM05D002674 ORTHO05D008041 2.4e-35 152.1 106 72.6
COL.COLO4_23349 Corchorus olitorius HOM05D002674 ORTHO05D008041 3.1e-35 151.8 103 76.7
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 3.1e-35 151.8 109 72.5
Oeu048338.1 Olea europaea HOM05D002674 ORTHO05D008041 3.1e-35 151.8 102 76.5
Solyc09g075100.3 Solanum lycopersicum HOM05D002674 ORTHO05D008041 3.1e-35 151.8 104 74.0
Sopen09g029920 Solanum pennellii HOM05D002674 ORTHO05D008041 3.1e-35 151.8 104 74.0
Thecc.01G300000 Theobroma cacao HOM05D002674 ORTHO05D008041 3.1e-35 151.8 103 77.7
Migut.D00216 Erythranthe guttata HOM05D002674 ORTHO05D008041 7.0e-35 150.6 102 74.5
Nitab4.5_0008207g0030 Nicotiana tabacum HOM05D002674 ORTHO05D008041 7.0e-35 150.6 104 75.0
Nitab4.5_0001879g0010 Nicotiana tabacum HOM05D002674 ORTHO05D008041 9.1e-35 150.2 102 75.5
Atru.chr7.1564 Acer truncatum HOM05D002674 ORTHO05D008041 1.6e-34 149.4 103 74.8
Cc01_g20820 Coffea canephora HOM05D002674 ORTHO05D008041 2.7e-34 148.7 107 72.9
Atru.chr5.1150 Acer truncatum HOM05D002674 ORTHO05D008041 4.5e-34 147.9 101 74.3
Ca_10338_v3 Cicer arietinum L. HOM05D002674 ORTHO05D008041 4.5e-34 147.9 103 74.8
TWI14G1447 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 4.5e-34 147.9 103 74.8
Ciclev10022953m.g Citrus clementina HOM05D002674 ORTHO05D008041 7.7e-34 147.1 103 71.8
ECA247G1692 Erigeron canadensis HOM05D002674 ORTHO05D008041 1.0e-33 146.7 110 71.8
Gohir.D08G085400 Gossypium hirsutum HOM05D002674 ORTHO05D008041 1.0e-33 146.7 102 73.5
Gohir.A08G076000 Gossypium hirsutum HOM05D002674 ORTHO05D008041 1.3e-33 146.4 102 72.5
VMungo0720G1979 Vigna mungo HOM05D002674 ORTHO05D008041 1.3e-33 146.4 110 71.8
CANSAT25G0502 Cannabis sativa HOM05D002674 ORTHO05D008041 1.7e-33 146.0 100 72.0
HanXRQChr15g0465661 Helianthus annuus HOM05D002674 ORTHO05D008041 2.9e-33 145.2 104 72.1
Cpa.g.sc9.264 Carica papaya HOM05D002674 ORTHO05D008041 5.0e-33 144.4 102 72.5
FvH4_3g17380 Fragaria vesca HOM05D002674 ORTHO05D008041 5.0e-33 144.4 101 74.3
FAN11G2206 Fragaria x ananassa HOM05D002674 ORTHO05D008041 5.0e-33 144.4 101 74.3
Manes.01G218700 Manihot esculenta HOM05D002674 ORTHO05D008041 5.0e-33 144.4 102 71.6
Potri.014G129800 Populus trichocarpa HOM05D002674 ORTHO05D008041 5.0e-33 144.4 103 71.8
CiPaw.07G108500 Carya illinoinensis HOM05D002674 ORTHO05D008041 6.5e-33 144.1 97 75.3
Phvul.007G146200 Phaseolus vulgaris HOM05D002674 ORTHO05D008041 6.5e-33 144.1 103 70.9
Psat6g166360 Pisum sativum HOM05D002674 ORTHO05D008041 6.5e-33 144.1 103 72.8
QL12p028510 Quercus lobata HOM05D002674 ORTHO05D008041 8.5e-33 143.7 97 74.2
FAN16G1943 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.5e-32 142.9 101 73.3
FAN21G2416 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.5e-32 142.9 101 73.3
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 1.9e-32 142.5 103 72.8
Eucgr.H01115 Eucalyptus grandis HOM05D002674 ORTHO05D008041 1.9e-32 142.5 103 68.9
FvH4_2g25692 Fragaria vesca HOM05D002674 ORTHO05D008041 1.9e-32 142.5 100 74.0
FAN25G1445 Fragaria x ananassa HOM05D002674 ORTHO05D008041 2.5e-32 142.1 101 73.3
Nn3g21482 Nelumbo nucifera HOM05D002674 ORTHO05D008041 2.5e-32 142.1 106 69.8
PGR119G0614 Punica granatum HOM05D002674 ORTHO05D008041 2.5e-32 142.1 98 72.4
Sabra02G0154500 Salix brachista HOM05D002674 ORTHO05D008041 3.2e-32 141.7 103 69.9
TWI23G1311 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 4.2e-32 141.4 103 71.8
ClCG10G010910 Citrullus lanatus HOM05D002674 ORTHO05D008041 5.5e-32 141.0 103 68.0
arahy.Tifrunner.gnm1.ann1.9NAT9F Arachis hypogaea HOM05D002674 ORTHO05D008041 7.2e-32 140.6 104 69.2
arahy.Tifrunner.gnm1.ann1.UV7MYU Arachis hypogaea HOM05D002674 ORTHO05D008041 7.2e-32 140.6 104 69.2
Carub.0005s2947 Capsella rubella HOM05D002674 ORTHO05D008041 9.4e-32 140.2 100 71.0
Glyma.10G018500 Glycine max HOM05D002674 ORTHO05D008041 9.4e-32 140.2 106 67.9
Aqoxy5G00753 Aquilegia oxysepala HOM05D002674 ORTHO05D008041 1.2e-31 139.8 109 67.0
Lj5g0008305 Lotus japonicus HOM05D002674 ORTHO05D008041 1.2e-31 139.8 104 70.2
unitig_61.g26303 Utricularia gibba HOM05D002674 ORTHO05D008041 1.6e-31 139.4 101 68.3
MD11G1310400 Malus domestica HOM05D002674 ORTHO05D008041 2.1e-31 139.0 102 67.6
PGR044G1069 Punica granatum HOM05D002674 ORTHO05D008041 4.7e-31 137.9 94 74.5
RcHm_v2.0_Chr6g0293971 Rosa chinensis HOM05D002674 ORTHO05D008041 4.7e-31 137.9 100 72.0
Hund18156 Selenicereus undatus HOM05D002674 ORTHO05D008041 4.7e-31 137.9 100 71.0
BcaC02g10314 Brassica carinata HOM05D002674 ORTHO05D008041 8.0e-31 137.1 101 67.3
A04p00510 Brassica napus HOM05D002674 ORTHO05D008041 8.0e-31 137.1 101 67.3
BolC4t24576H Brassica oleracea HOM05D002674 ORTHO05D008041 8.0e-31 137.1 101 67.3
BraA04t15771Z Brassica rapa HOM05D002674 ORTHO05D008041 8.0e-31 137.1 101 67.3
Sp5g00710 Schrenkiella parvula HOM05D002674 ORTHO05D008041 8.0e-31 137.1 102 66.7
AUR62033146 Chenopodium quinoa HOM05D002674 ORTHO05D008041 1.0e-30 136.7 102 67.6
Prupe.8G261100 Prunus persica HOM05D002674 ORTHO05D008041 1.0e-30 136.7 100 70.0
vmacro02452 Vaccinium macrocarpon HOM05D002674 ORTHO05D008041 1.0e-30 136.7 161 54.0
Aa31LG10G16570 Aethionema arabicum HOM05D002674 ORTHO05D008041 1.8e-30 136.0 102 64.7
AUR62008625 Chenopodium quinoa HOM05D002674 ORTHO05D008041 1.8e-30 136.0 102 67.6
MBI19_g25355_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D008041 2.3e-30 135.6 105 68.6
AL5G45590 Arabidopsis lyrata HOM05D002674 ORTHO05D008041 3.0e-30 135.2 102 67.6
Sed0019690 Sechium edule HOM05D002674 ORTHO05D008041 3.0e-30 135.2 101 66.3
CDE12G0521 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 4.0e-30 134.8 99 66.7
MELO3C017957.2 Cucumis melo HOM05D002674 ORTHO05D008041 4.0e-30 134.8 101 64.4
Haze_04934 Corylus avellana HOM05D002674 ORTHO05D008041 5.2e-30 134.4 97 71.1
CsaV3_4G000790 Cucumis sativus L. HOM05D002674 ORTHO05D008041 5.2e-30 134.4 101 63.4
Thhalv10006327m.g Eutrema salsugineum HOM05D002674 ORTHO05D008041 5.2e-30 134.4 104 67.3
EL10Ac7g17468 Beta vulgaris HOM05D002674 ORTHO05D008041 6.8e-30 134.0 102 66.7
Cfa005915 Carpinus fangiana HOM05D002674 ORTHO05D008041 8.8e-30 133.7 97 70.1
AT3G62810 Arabidopsis thaliana HOM05D002674 ORTHO05D008041 1.2e-29 133.3 102 65.7
BcaC07g42733 Brassica carinata HOM05D002674 ORTHO05D008041 1.5e-29 132.9 98 68.4
C04p30420 Brassica napus HOM05D002674 ORTHO05D008041 1.5e-29 132.9 101 65.3
GSVIVG01028011001 Vitis vinifera HOM05D002674 ORTHO05D008041 4.4e-29 131.3 101 64.4
ATR0796G030 Amborella trichopoda HOM05D002674 ORTHO05D008041 9.8e-29 130.2 102 62.7
TPR.G34008 Trifolium pratense HOM05D002674 ORTHO05D008041 9.8e-29 130.2 104 67.3
BcaB02g08097 Brassica carinata HOM05D002674 ORTHO05D008041 1.3e-28 129.8 101 64.4
MD03G1287900 Malus domestica HOM05D002674 ORTHO05D008041 1.3e-28 129.8 102 64.7
Medtr1g088550 Medicago truncatula HOM05D002674 ORTHO05D008041 1.3e-28 129.8 104 65.4
CARHR173080 Cardamine hirsuta HOM05D002674 ORTHO05D008041 6.3e-28 127.5 102 65.7
BraA09t40877Z Brassica rapa HOM05D002674 ORTHO05D008041 5.4e-27 124.4 98 66.3
PSO832G1306 Papaver somniferum HOM05D002674 ORTHO05D008041 1.6e-26 122.9 102 58.8
PSO210G6076 Papaver somniferum HOM05D002674 ORTHO05D008041 2.0e-26 122.5 102 57.8
A09p54660 Brassica napus HOM05D002674 ORTHO05D008041 4.5e-26 121.3 98 65.3
Sabra14G0096400 Salix brachista HOM05D002674 ORTHO05D008041 7.7e-26 120.6 97 62.9
SalBow3G1515 Salvia bowleyana HOM05D002674 ORTHO05D008041 7.7e-26 120.6 83 73.5
Lalb_Chr02g0143261 Lupinus albus HOM05D000266 ORTHO05D008041 1.9e-24 115.9 85 68.2
SalBow5G2922 Salvia bowleyana HOM05D002674 ORTHO05D008041 2.5e-24 115.5 81 74.1
Oeu010670.1 Olea europaea HOM05D002674 ORTHO05D008041 2.1e-23 112.5 102 61.8
SEGI_38702 Sequoiadendron giganteum HOM05D002674 ORTHO05D008041 2.8e-23 112.1 102 54.9
Lsat_1_v5_gn_9_5640 Lactuca sativa HOM05D002674 ORTHO05D008643 3.6e-23 111.7 85 70.6
Os05g0363600 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D008041 8.0e-23 110.5 107 54.2
Duzib138G1033 Durio zibethinus HOM05D002674 ORTHO05D008041 3.0e-22 108.6 77 72.7
Zm00001eb346590 Zea mays HOM05D002674 ORTHO05D008041 5.2e-22 107.8 102 54.9
Gorai.004G089900 Gossypium raimondii HOM05D002674 ORTHO05D008041 6.8e-22 107.5 77 71.4
Sc24g0003780 Simmondsia chinensis HOM05D002674 ORTHO05D008041 4.4e-21 104.8 76 69.7
Hma1.2p1_0491F.1_g164520 Hydrangea macrophylla HOM05D002674 ORTHO05D008041 9.8e-21 103.6 78 67.9
CDE01G0164 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 2.8e-20 102.1 76 65.8
Haze_04957 Corylus avellana HOM05D002674 ORTHO05D008041 1.1e-19 100.1 76 68.4
HPP92_013721 Vanilla planifolia HOM05D002674 ORTHO05D008041 1.1e-19 100.1 183 38.3
Ah.15g093210 Amaranthus hybridus HOM05D002674 ORTHO05D008041 4.1e-19 98.2 77 64.9
Glyma.02G018200 Glycine max HOM05D002674 ORTHO05D008041 2.7e-18 95.5 78 62.8
DCAR_002831 Daucus carota HOM05D000067 ORTHO05D001807 5.9e-18 94.4 78 61.5
C08p37560 Brassica napus HOM05D002674 ORTHO05D008041 7.8e-18 94.0 74 63.5
Mapoly0061s0038 Marchantia polymorpha HOM05D002674 ORTHO05D008041 5.0e-17 91.3 92 48.9
AagrBONN_evm.TU.Sc2ySwM_362.373 Anthoceros agrestis HOM05D002674 ORTHO05D008041 3.7e-12 75.1 97 41.2
Pp3c9_7930 Physcomitrium patens HOM05D002674 ORTHO05D008041 6.4e-12 74.3 91 40.7
RcHm_v2.0_Chr2g0146991 Rosa chinensis HOM05D002674 ORTHO05D008041 9.2e-11 70.5 55 65.5
Peaxi162Scf00545g00027 Petunia axillaris HOM05D002674 ORTHO05D008041 2.0e-10 69.3 50 66.0
BcaC07g40760 Brassica carinata HOM05D002674 ORTHO05D008041 4.6e-10 68.2 72 50.0
BolC8t51336H Brassica oleracea HOM05D002674 ORTHO05D008041 4.6e-10 68.2 72 50.0
CBR_g24042 Chara braunii HOM05D002674 ORTHO05D008041 6.6e-09 64.3 101 38.6
PSO832G3862 Papaver somniferum HOM05D001297 ORTHO05D001135 2.1e-07 59.3 78 44.9
Cre07.g332150 Chlamydomonas reinhardtii HOM05D002674 ORTHO05D008041 4.0e-06 55.1 89 34.8


User provided reference genes

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