Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018133 Camellia sinensis var. sinensis HOM05D006938 ORTHO05D008600 5.9e-118 427.6 217 100.0
Actinidia11174 Actinidia chinensis HOM05D006938 ORTHO05D008600 1.1e-68 263.8 219 67.1
Dinv17599 Davidia involucrata HOM05D006938 ORTHO05D008600 1.2e-62 243.8 233 63.1
vmacro22268 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 5.1e-61 238.4 192 68.2
TAR629G2816 Trochodendron aralioides HOM05D006938 ORTHO05D008600 4.2e-55 218.8 189 67.2
Manes.10G035800 Manihot esculenta HOM05D006938 ORTHO05D008600 3.9e-53 212.2 171 66.1
vmacro22787 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 9.6e-52 207.6 150 74.7
Cc07_g19080 Coffea canephora HOM05D006938 ORTHO05D008600 2.8e-51 206.1 179 64.2
QL03p043666 Quercus lobata HOM05D006938 ORTHO05D008600 1.1e-50 204.1 184 62.0
CiPaw.09G164200 Carya illinoinensis HOM05D006938 ORTHO05D008600 3.1e-50 202.6 122 84.4
Lj6P721T41 Lonicera japonica HOM05D006938 ORTHO05D008600 4.0e-50 202.2 178 64.0
Potri.002G062100 Populus trichocarpa HOM05D006938 ORTHO05D008600 4.0e-50 202.2 173 64.7
Sabra02G0050200 Salix brachista HOM05D006938 ORTHO05D008600 9.0e-50 201.1 188 60.1
GSVIVG01010180001 Vitis vinifera HOM05D006938 ORTHO05D008600 9.0e-50 201.1 215 55.3
arahy.Tifrunner.gnm1.ann1.ZPRB1V Arachis hypogaea HOM05D006938 ORTHO05D008600 1.2e-49 200.7 174 63.8
FvH4_4g36740 Fragaria vesca HOM05D006938 ORTHO05D008600 1.2e-49 200.7 135 74.1
FAN12G4276 Fragaria x ananassa HOM05D006938 ORTHO05D008600 1.2e-49 200.7 135 74.1
FAN17G2681 Fragaria x ananassa HOM05D006938 ORTHO05D008600 1.2e-49 200.7 135 74.1
Lj5g0002504 Lotus japonicus HOM05D006938 ORTHO05D008600 1.2e-49 200.7 129 75.2
Hma1.2p1_0232F.1_g097690 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 2.0e-49 199.9 135 77.8
RcHm_v2.0_Chr4g0446461 Rosa chinensis HOM05D006938 ORTHO05D008600 2.0e-49 199.9 121 81.0
Glyma.10G219400 Glycine max HOM05D006938 ORTHO05D008600 4.5e-49 198.7 146 71.2
Psat6g189200 Pisum sativum HOM05D006938 ORTHO05D008600 5.8e-49 198.4 180 62.8
Oeu024662.1 Olea europaea HOM05D006938 ORTHO05D008600 7.6e-49 198.0 149 69.8
Rhsim06G0126000 Rhododendron simsii HOM05D006938 ORTHO05D008600 7.6e-49 198.0 118 83.9
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 2.2e-48 196.4 170 61.8
Medtr1g097270 Medicago truncatula HOM05D006938 ORTHO05D008600 2.2e-48 196.4 191 57.6
Prupe.1G345500 Prunus persica HOM05D006938 ORTHO05D008600 2.2e-48 196.4 199 58.3
Thecc.03G060300 Theobroma cacao HOM05D006938 ORTHO05D008600 2.9e-48 196.1 175 61.1
PGR142G2203 Punica granatum HOM05D006938 ORTHO05D008600 3.8e-48 195.7 192 58.9
PSO478G3769 Papaver somniferum HOM05D006938 ORTHO05D008600 4.9e-48 195.3 225 54.2
CAN.G157.8 Capsicum annuum HOM05D006938 ORTHO05D008600 6.4e-48 194.9 188 59.6
Duzib084G0622 Durio zibethinus HOM05D006938 ORTHO05D008600 6.4e-48 194.9 179 61.5
Glyma.20G172300 Glycine max HOM05D006938 ORTHO05D008600 8.4e-48 194.5 146 70.5
SGA_v2.0_scaffold25G10864 Striga asiatica HOM05D006938 ORTHO05D008600 8.4e-48 194.5 106 90.6
PGSC0003DMG400019837 Solanum tuberosum HOM05D006938 ORTHO05D008600 1.9e-47 193.4 117 82.9
Cfa008713 Carpinus fangiana HOM05D006938 ORTHO05D008600 2.4e-47 193.0 116 83.6
Phvul.007G086000 Phaseolus vulgaris HOM05D006938 ORTHO05D008600 2.4e-47 193.0 129 76.7
Potri.005G199000 Populus trichocarpa HOM05D006938 ORTHO05D008600 2.4e-47 193.0 190 58.9
Lalb_Chr03g0035761 Lupinus albus HOM05D006938 ORTHO05D008600 4.2e-47 192.2 180 60.6
Haze_11723 Corylus avellana HOM05D006938 ORTHO05D008600 7.1e-47 191.4 117 84.6
Hund24283 Selenicereus undatus HOM05D006938 ORTHO05D008600 7.1e-47 191.4 161 62.7
MD16G1000600 Malus domestica HOM05D006938 ORTHO05D008600 9.3e-47 191.0 189 59.3
TPR.G23154 Trifolium pratense HOM05D006938 ORTHO05D008600 9.3e-47 191.0 130 71.5
Ca_10639_v3 Cicer arietinum L. HOM05D006938 ORTHO05D008600 1.2e-46 190.7 220 54.1
Eucgr.G00991 Eucalyptus grandis HOM05D006938 ORTHO05D008600 1.6e-46 190.3 111 82.9
ATR0618G369 Amborella trichopoda HOM05D006938 ORTHO05D008600 2.1e-46 189.9 104 89.4
PSO017G4971 Papaver somniferum HOM05D006938 ORTHO05D008600 2.1e-46 189.9 173 62.4
SGA_v2.0_scaffold467G52037 Striga asiatica HOM05D006938 ORTHO05D008600 2.7e-46 189.5 144 71.5
MBI06_g36504_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 3.5e-46 189.1 136 69.9
ClCG09G005720 Citrullus lanatus HOM05D006938 ORTHO05D008600 1.0e-45 187.6 148 68.2
Gorai.007G003100 Gossypium raimondii HOM05D006938 ORTHO05D008600 1.3e-45 187.2 171 59.6
Aqoxy3G04277 Aquilegia oxysepala HOM05D006938 ORTHO05D008600 1.8e-45 186.8 136 69.1
ECA246G5327 Erigeron canadensis HOM05D006938 ORTHO05D008600 1.8e-45 186.8 138 71.7
Peaxi162Scf00363g00087 Petunia axillaris HOM05D006938 ORTHO05D008600 1.8e-45 186.8 179 58.7
MD13G1007500 Malus domestica HOM05D006938 ORTHO05D008600 2.3e-45 186.4 172 61.0
Hma1.2p1_0499F.1_g166850 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 3.0e-45 186.0 118 79.7
Lsat_1_v5_gn_3_33800 Lactuca sativa HOM05D006938 ORTHO05D008600 3.0e-45 186.0 108 85.2
Nitab4.5_0002392g0050 Nicotiana tabacum HOM05D006938 ORTHO05D008600 3.0e-45 186.0 140 69.3
Migut.I00065 Erythranthe guttata HOM05D006938 ORTHO05D008600 6.7e-45 184.9 103 87.4
TWI53G1636 Tripterygium wilfordii HOM05D006938 ORTHO05D008600 6.7e-45 184.9 157 63.7
Gohir.A11G002500 Gossypium hirsutum HOM05D006938 ORTHO05D008600 1.1e-44 184.1 150 64.7
Gohir.D11G002100 Gossypium hirsutum HOM05D006938 ORTHO05D008600 1.1e-44 184.1 152 63.2
Oeu022179.1 Olea europaea HOM05D006938 ORTHO05D008600 1.1e-44 184.1 102 89.2
MELO3C015984.2 Cucumis melo HOM05D006938 ORTHO05D008600 1.5e-44 183.7 164 61.0
HanXRQChr17g0540771 Helianthus annuus HOM05D006938 ORTHO05D008600 1.5e-44 183.7 132 75.8
Nitab4.5_0000139g0080 Nicotiana tabacum HOM05D006938 ORTHO05D008600 1.5e-44 183.7 121 77.7
CANSAT64G2234 Cannabis sativa HOM05D006938 ORTHO05D008600 1.9e-44 183.3 146 65.1
Cpa.g.sc51.44 Carica papaya HOM05D006938 ORTHO05D008600 1.9e-44 183.3 131 70.2
CsaV3_7G029440 Cucumis sativus L. HOM05D006938 ORTHO05D008600 1.9e-44 183.3 135 69.6
Atru.chr11.1233 Acer truncatum HOM05D006938 ORTHO05D008600 4.3e-44 182.2 186 55.9
Atru.chr11.1321 Acer truncatum HOM05D006938 ORTHO05D008600 4.3e-44 182.2 186 55.9
Sed0026401 Sechium edule HOM05D006938 ORTHO05D008600 4.3e-44 182.2 156 64.7
Sopen02g005300 Solanum pennellii HOM05D006938 ORTHO05D008600 5.6e-44 181.8 124 75.0
AUR62015206 Chenopodium quinoa HOM05D006938 ORTHO05D008600 1.3e-43 180.6 156 61.5
AUR62017669 Chenopodium quinoa HOM05D006938 ORTHO05D008600 1.3e-43 180.6 142 65.5
Sc20g0002200 Simmondsia chinensis HOM05D006938 ORTHO05D008600 1.3e-43 180.6 108 81.5
Solyc02g021000.3 Solanum lycopersicum HOM05D006938 ORTHO05D008600 1.3e-43 180.6 124 75.0
THA.LOC104805738 Tarenaya hassleriana HOM05D006938 ORTHO05D008600 1.6e-43 180.3 141 66.0
Ah.01g012920 Amaranthus hybridus HOM05D006938 ORTHO05D008600 2.1e-43 179.9 109 79.8
Nn4g24932 Nelumbo nucifera HOM05D006938 ORTHO05D008600 2.1e-43 179.9 192 55.2
BcaB02g08043 Brassica carinata HOM05D006938 ORTHO05D008600 2.8e-43 179.5 109 79.8
Sp7g06080 Schrenkiella parvula HOM05D006938 ORTHO05D008600 2.8e-43 179.5 138 67.4
Ciclev10032755m.g Citrus clementina HOM05D006938 ORTHO05D008600 4.8e-43 178.7 124 71.8
BcaC08g44319 Brassica carinata HOM05D006938 ORTHO05D008600 6.2e-43 178.3 131 68.7
C06p17420 Brassica napus HOM05D006938 ORTHO05D008600 6.2e-43 178.3 131 68.7
BolC6t36937H Brassica oleracea HOM05D006938 ORTHO05D008600 6.2e-43 178.3 131 68.7
AT5G36120 Arabidopsis thaliana HOM05D006938 ORTHO05D008600 1.1e-42 177.6 135 67.4
A05p16420 Brassica napus HOM05D006938 ORTHO05D008600 1.8e-42 176.8 145 62.8
Thhalv10005006m.g Eutrema salsugineum HOM05D006938 ORTHO05D008600 2.4e-42 176.4 161 59.0
HPP92_002538 Vanilla planifolia HOM05D006938 ORTHO05D008600 2.4e-42 176.4 110 75.5
AL7G45100 Arabidopsis lyrata HOM05D006938 ORTHO05D008600 5.3e-42 175.3 189 52.4
RcHm_v2.0_Chr3g0449681 Rosa chinensis HOM05D006938 ORTHO05D008600 6.9e-42 174.9 100 83.0
HPP92_002496 Vanilla planifolia HOM05D006938 ORTHO05D008600 9.0e-42 174.5 110 74.5
Aa31LG9G17890 Aethionema arabicum HOM05D006938 ORTHO05D008600 1.5e-41 173.7 127 67.7
Manes.07G111600 Manihot esculenta HOM05D006938 ORTHO05D008600 1.5e-41 173.7 173 56.6
BraA05t20549Z Brassica rapa HOM05D006938 ORTHO05D008600 2.0e-41 173.3 146 62.3
Carub.0007s3179 Capsella rubella HOM05D006938 ORTHO05D008600 5.8e-41 171.8 122 68.9
Sc10g0007070 Simmondsia chinensis HOM05D006938 ORTHO05D008600 1.3e-40 170.6 108 78.7
Os01g0966200 Oryza sativa ssp. japonica HOM05D006938 ORTHO05D008600 3.8e-40 169.1 102 82.4
Zm00001eb362370 Zea mays HOM05D006938 ORTHO05D008600 9.3e-39 164.5 117 71.8
Mapoly0101s0070 Marchantia polymorpha HOM05D006938 ORTHO05D008600 1.4e-34 150.6 130 61.5
CDE07G1356 Ceratophyllum demersum HOM05D002851 ORTHO05D003084 5.3e-34 148.7 88 83.0
Pp3c10_19880 Physcomitrium patens HOM05D006938 ORTHO05D008600 1.5e-33 147.1 118 64.4
AagrBONN_evm.TU.Sc2ySwM_344.2773 Anthoceros agrestis HOM05D006938 ORTHO05D008600 2.0e-33 146.7 111 64.0
SEGI_34816 Sequoiadendron giganteum HOM05D006938 ORTHO05D008600 4.2e-31 139.0 103 63.1
MCO16G496 Micromonas commoda HOM05D006938 ORTHO05D008600 6.0e-30 135.2 119 58.8
MBI06_g34033_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 1.1e-28 131.0 80 78.8
unitig_21.g20451 Utricularia gibba HOM05D006938 ORTHO05D008600 1.9e-28 130.2 71 85.9
Peaxi162Scf00818g00021 Petunia axillaris HOM05D006938 ORTHO05D008600 9.3e-23 111.3 63 82.5
Cre01.g052400 Chlamydomonas reinhardtii HOM05D006938 ORTHO05D008600 4.8e-19 99.0 93 50.5
CDE06G1837 Ceratophyllum demersum HOM05D006938 ORTHO05D008600 2.4e-18 96.7 87 59.8
PRCOL_00002779 Prasinoderma coloniale HOM05D006938 ORTHO05D008600 1.5e-17 94.0 74 59.5
EL10Ac9g22924 Beta vulgaris HOM05D006938 ORTHO05D008600 8.5e-16 88.2 44 88.6
CsaV3_4G025230 Cucumis sativus L. HOM05D006938 ORTHO05D008600 1.9e-15 87.0 59 76.3
Migut.I00066 Erythranthe guttata HOM05D006938 ORTHO05D008600 6.3e-11 72.0 44 72.7
Sc10g0007050 Simmondsia chinensis HOM05D006938 ORTHO05D008600 8.2e-11 71.6 50 68.0


User provided reference genes

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