Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018113 Camellia sinensis var. sinensis HOM05D000738 ORTHO05D109001 1.2e-49 199.5 99 100.0
CSS0025677 Camellia sinensis var. sinensis HOM05D000738 ORTHO05D110795 3.5e-49 198.0 99 99.0
Dinv17091 Davidia involucrata HOM05D000738 ORTHO05D000675 2.8e-14 82.0 84 54.8
CSS0024287 Camellia sinensis var. sinensis HOM05D000738 ORTHO05D000675 2.3e-13 79.0 79 59.5
CSS0046029 Camellia sinensis var. sinensis HOM05D000738 ORTHO05D000675 2.3e-13 79.0 79 59.5
Ciclev10027754m.g Citrus clementina HOM05D000738 ORTHO05D000675 8.9e-13 77.0 83 51.8
Rhsim01G0201800 Rhododendron simsii HOM05D000738 ORTHO05D000675 4.4e-12 74.7 84 52.4
Thecc.09G274200 Theobroma cacao HOM05D000738 ORTHO05D000675 9.9e-12 73.6 82 51.2
Sabra16G0126000 Salix brachista HOM05D000738 ORTHO05D000675 1.7e-11 72.8 87 47.1
Cc01_g08550 Coffea canephora HOM05D000738 ORTHO05D000675 2.2e-11 72.4 78 53.8
FvH4_3g26671 Fragaria vesca HOM05D000738 ORTHO05D000675 2.2e-11 72.4 81 53.1
FAN11G3260 Fragaria x ananassa HOM05D000738 ORTHO05D000675 2.2e-11 72.4 81 53.1
FAN16G3682 Fragaria x ananassa HOM05D000738 ORTHO05D000675 2.2e-11 72.4 81 53.1
FAN21G2600 Fragaria x ananassa HOM05D000738 ORTHO05D000675 2.2e-11 72.4 81 53.1
VMungo1127G0334 Vigna mungo HOM05D000738 ORTHO05D000675 2.9e-11 72.0 80 50.0
RcHm_v2.0_Chr5g0048101 Rosa chinensis HOM05D000738 ORTHO05D000675 3.7e-11 71.6 81 53.1
Prupe.6G142700 Prunus persica HOM05D000738 ORTHO05D000675 8.3e-11 70.5 81 51.9
MBI17_g00901_MAGBIO Magnolia biondii HOM05D000738 ORTHO05D000675 1.1e-10 70.1 82 48.8
Phvul.011G098200 Phaseolus vulgaris HOM05D000738 ORTHO05D000675 1.1e-10 70.1 80 48.8
TWI79G1134 Tripterygium wilfordii HOM05D000738 ORTHO05D000675 1.1e-10 70.1 76 48.7
TAR636G3338 Trochodendron aralioides HOM05D000738 ORTHO05D000675 1.1e-10 70.1 81 49.4
Ca_19464_v3 Cicer arietinum L. HOM05D000738 ORTHO05D000675 1.4e-10 69.7 85 47.1
MD00G1129100 Malus domestica HOM05D000738 ORTHO05D000675 1.4e-10 69.7 82 50.0
Psat7g186200 Pisum sativum HOM05D000738 ORTHO05D000675 1.4e-10 69.7 93 45.2
Atru.chr3.3132 Acer truncatum HOM05D000738 ORTHO05D000675 1.9e-10 69.3 83 48.2
COL.COLO4_07956 Corchorus olitorius HOM05D000738 ORTHO05D000675 1.9e-10 69.3 84 47.6
Duzib150G0736 Durio zibethinus HOM05D000738 ORTHO05D000675 1.9e-10 69.3 75 52.0
vmacro14325 Vaccinium macrocarpon HOM05D000738 ORTHO05D000675 1.9e-10 69.3 84 53.6
Potri.009G020100 Populus trichocarpa HOM05D000738 ORTHO05D000675 2.4e-10 68.9 87 44.8
Gohir.A07G112900 Gossypium hirsutum HOM05D000738 ORTHO05D000675 3.2e-10 68.6 73 53.4
Cfa009945 Carpinus fangiana HOM05D000738 ORTHO05D000675 4.1e-10 68.2 83 47.0
CiPaw.13G130900 Carya illinoinensis HOM05D000738 ORTHO05D000675 4.1e-10 68.2 83 48.2
Manes.04G000200 Manihot esculenta HOM05D000738 ORTHO05D000675 4.1e-10 68.2 74 51.4
TAR633G1692 Trochodendron aralioides HOM05D000738 ORTHO05D000675 4.1e-10 68.2 81 46.9
MD03G1153600 Malus domestica HOM05D000738 ORTHO05D000675 5.4e-10 67.8 82 47.6
Gohir.D07G116400 Gossypium hirsutum HOM05D000738 ORTHO05D000675 7.1e-10 67.4 73 52.1
Gorai.001G124800 Gossypium raimondii HOM05D000738 ORTHO05D000675 7.1e-10 67.4 73 52.1
Medtr2g087090 Medicago truncatula HOM05D000738 ORTHO05D000675 7.1e-10 67.4 81 48.1
Actinidia07273 Actinidia chinensis HOM05D000738 ORTHO05D000675 9.2e-10 67.0 84 51.2
Glyma.11G179600 Glycine max HOM05D000738 ORTHO05D000675 9.2e-10 67.0 83 48.2
Glyma.13G313500 Glycine max HOM05D000738 ORTHO05D000675 9.2e-10 67.0 75 50.7
Haze_23311 Corylus avellana HOM05D000738 ORTHO05D000675 1.2e-09 66.6 83 45.8
Duzib168G0420 Durio zibethinus HOM05D000738 ORTHO05D000675 1.2e-09 66.6 83 45.8
QL01p011193 Quercus lobata HOM05D000738 ORTHO05D000675 1.2e-09 66.6 83 47.0
CAN.G689.11 Capsicum annuum HOM05D000738 ORTHO05D000675 1.6e-09 66.2 79 50.6
Glyma.12G093800 Glycine max HOM05D000738 ORTHO05D000675 2.1e-09 65.9 95 41.1
Glyma.12G187700 Glycine max HOM05D000738 ORTHO05D000675 2.1e-09 65.9 75 50.7
Cpa.g.sc754.4 Carica papaya HOM05D000738 ORTHO05D000675 3.5e-09 65.1 79 49.4
Nn2g14289 Nelumbo nucifera HOM05D000738 ORTHO05D000675 3.5e-09 65.1 85 48.2
Nn6g34707 Nelumbo nucifera HOM05D000738 ORTHO05D000675 3.5e-09 65.1 87 47.1
VMungo1080G1792 Vigna mungo HOM05D000738 ORTHO05D000675 4.6e-09 64.7 85 43.5
Solyc11g071970.2 Solanum lycopersicum HOM05D000738 ORTHO05D000675 6.0e-09 64.3 79 48.1
Sopen11g029640 Solanum pennellii HOM05D000738 ORTHO05D000675 6.0e-09 64.3 79 48.1
ClCG02G022420 Citrullus lanatus HOM05D000738 ORTHO05D000675 7.8e-09 63.9 99 40.4
Lalb_Chr01g0004991 Lupinus albus HOM05D000738 ORTHO05D000675 7.8e-09 63.9 85 45.9
Potri.001G218100 Populus trichocarpa HOM05D000738 ORTHO05D000675 7.8e-09 63.9 77 46.8
Sabra09G0012200 Salix brachista HOM05D000738 ORTHO05D000675 7.8e-09 63.9 75 50.7
TPR.G4651 Trifolium pratense HOM05D000738 ORTHO05D000675 7.8e-09 63.9 85 43.5
TWI31G0721 Tripterygium wilfordii HOM05D000738 ORTHO05D000675 7.8e-09 63.9 76 46.1
DCAR_012233 Daucus carota HOM05D000738 ORTHO05D000675 1.3e-08 63.2 79 48.1
THA.LOC104799564 Tarenaya hassleriana HOM05D000738 ORTHO05D000675 1.3e-08 63.2 87 43.7
Lalb_Chr03g0028361 Lupinus albus HOM05D000738 ORTHO05D000675 1.7e-08 62.8 84 45.2
TWI31G1392 Tripterygium wilfordii HOM05D000738 ORTHO05D000675 1.7e-08 62.8 76 44.7
Aqoxy1G00674 Aquilegia oxysepala HOM05D000738 ORTHO05D000675 3.0e-08 62.0 77 50.6
arahy.Tifrunner.gnm1.ann1.F3KKM7 Arachis hypogaea HOM05D000738 ORTHO05D000675 3.0e-08 62.0 81 46.9
Sed0000317 Sechium edule HOM05D000738 ORTHO05D000675 3.0e-08 62.0 92 41.3
Sp5g17110 Schrenkiella parvula HOM05D000738 ORTHO05D000675 3.9e-08 61.6 85 42.4
CiPaw.14G095300 Carya illinoinensis HOM05D000738 ORTHO05D000675 5.1e-08 61.2 83 47.0
PSO339G6606 Papaver somniferum HOM05D000738 ORTHO05D000675 5.1e-08 61.2 103 36.9
PSO384G4854 Papaver somniferum HOM05D000738 ORTHO05D000675 5.1e-08 61.2 103 36.9
Peaxi162Scf00429g00625 Petunia axillaris HOM05D000738 ORTHO05D000675 5.1e-08 61.2 79 48.1
Eucgr.B03821 Eucalyptus grandis HOM05D000738 ORTHO05D000675 6.6e-08 60.8 82 43.9
Duzib170G0217 Durio zibethinus HOM05D000738 ORTHO05D000675 8.6e-08 60.5 83 44.6
Lj3g0001271 Lotus japonicus HOM05D000738 ORTHO05D000675 1.1e-07 60.1 82 45.1
CsaV3_6G038550 Cucumis sativus L. HOM05D000738 ORTHO05D000675 1.9e-07 59.3 100 39.0
Medtr4g051648 Medicago truncatula HOM05D000738 ORTHO05D000675 1.9e-07 59.3 74 48.6
AT3G44200 Arabidopsis thaliana HOM05D000738 ORTHO05D000675 2.5e-07 58.9 61 49.2
PGSC0003DMG402002977 Solanum tuberosum HOM05D000738 ORTHO05D000675 2.5e-07 58.9 79 46.8
Hma1.2p1_0101F.1_g049320 Hydrangea macrophylla HOM05D000738 ORTHO05D000675 3.3e-07 58.5 72 52.8
Hma1.2p1_0793F.1_g218590 Hydrangea macrophylla HOM05D000738 ORTHO05D000675 3.3e-07 58.5 72 52.8
AL5G22270 Arabidopsis lyrata HOM05D000738 ORTHO05D000675 7.3e-07 57.4 64 46.9
CAN.G226.25 Capsicum annuum HOM05D000738 ORTHO05D000675 1.2e-06 56.6 45 62.2
Oeu031458.2 Olea europaea HOM05D000738 ORTHO05D000675 1.2e-06 56.6 88 45.5
Aa31LG4G13730 Aethionema arabicum HOM05D000738 ORTHO05D000675 1.6e-06 56.2 55 52.7
Lj1A265G35 Lonicera japonica HOM05D000738 ORTHO05D000675 2.1e-06 55.8 50 64.0
Nitab4.5_0000158g0120 Nicotiana tabacum HOM05D000738 ORTHO05D000675 2.1e-06 55.8 79 46.8
Ca_01638_v3 Cicer arietinum L. HOM05D000738 ORTHO05D000675 2.8e-06 55.5 74 45.9
CANSAT54G3039 Cannabis sativa HOM05D000738 ORTHO05D000675 4.7e-06 54.7 94 36.2
Carub.0005s0995 Capsella rubella HOM05D000738 ORTHO05D000675 4.7e-06 54.7 64 46.9
Nitab4.5_0001504g0030 Nicotiana tabacum HOM05D000738 ORTHO05D000675 4.7e-06 54.7 72 45.8
Nitab4.5_0005363g0010 Nicotiana tabacum HOM05D000738 ORTHO05D000675 4.7e-06 54.7 79 45.6
arahy.Tifrunner.gnm1.ann1.9NFN0F Arachis hypogaea HOM05D000738 ORTHO05D000675 6.2e-06 54.3 81 46.9


User provided reference genes

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