Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018091 Camellia sinensis var. sinensis HOM05D006519 ORTHO05D008306 3.7e-174 614.8 309 100.0
CSS0037543 Camellia sinensis var. sinensis HOM05D006519 ORTHO05D008306 2.5e-162 575.5 298 97.3
Actinidia34959 Actinidia chinensis HOM05D006519 ORTHO05D008306 1.1e-130 470.3 273 85.0
GSVIVG01007824001 Vitis vinifera HOM05D006519 ORTHO05D008306 6.6e-115 417.9 275 76.4
Nn3g17016 Nelumbo nucifera HOM05D006519 ORTHO05D008306 3.2e-109 399.1 275 72.0
RcHm_v2.0_Chr7g0179701 Rosa chinensis HOM05D006519 ORTHO05D008306 3.2e-109 399.1 280 69.6
DCAR_031285 Daucus carota HOM05D006519 ORTHO05D008306 5.4e-109 398.3 271 73.4
CANSAT80G0931 Cannabis sativa HOM05D006519 ORTHO05D008306 1.6e-108 396.7 273 70.3
Gorai.012G002000 Gossypium raimondii HOM05D006519 ORTHO05D008306 2.3e-107 392.9 278 71.2
Hund02710 Selenicereus undatus HOM05D006519 ORTHO05D008306 2.3e-107 392.9 278 70.5
ECA232G3316 Erigeron canadensis HOM05D006519 ORTHO05D008306 1.1e-106 390.6 282 68.4
MD06G1181000 Malus domestica HOM05D006519 ORTHO05D008306 1.9e-106 389.8 273 70.7
TAR629G1196 Trochodendron aralioides HOM05D006519 ORTHO05D008306 2.5e-106 389.4 275 71.3
Migut.I00056 Erythranthe guttata HOM05D006519 ORTHO05D008306 2.8e-105 386.0 302 66.2
Haze_07439 Corylus avellana HOM05D006519 ORTHO05D008306 3.7e-105 385.6 280 68.6
Thecc.03G004500 Theobroma cacao HOM05D006519 ORTHO05D008306 4.8e-105 385.2 279 68.8
Duzib068G0259 Durio zibethinus HOM05D006519 ORTHO05D008306 1.1e-104 384.0 277 71.5
Gohir.D04G001000 Gossypium hirsutum HOM05D006519 ORTHO05D008306 1.1e-104 384.0 278 70.5
Potri.012G076100 Populus trichocarpa HOM05D006519 ORTHO05D008306 1.1e-104 384.0 276 69.2
FAN18G3891 Fragaria x ananassa HOM05D006519 ORTHO05D008306 1.8e-104 383.3 292 67.1
Prupe.5G179000 Prunus persica HOM05D006519 ORTHO05D008306 1.8e-104 383.3 274 69.3
Oeu016332.2 Olea europaea HOM05D006519 ORTHO05D008306 2.4e-104 382.9 293 66.9
Sabra12G0054300 Salix brachista HOM05D006519 ORTHO05D008306 2.4e-104 382.9 276 69.2
Ah.11g046180 Amaranthus hybridus HOM05D006519 ORTHO05D008306 3.1e-104 382.5 282 65.6
FAN13G2537 Fragaria x ananassa HOM05D006519 ORTHO05D008306 3.1e-104 382.5 292 66.8
Cc04_g13570 Coffea canephora HOM05D006519 ORTHO05D008306 9.0e-104 380.9 295 65.4
Nitab4.5_0003386g0010 Nicotiana tabacum HOM05D006519 ORTHO05D008306 1.5e-103 380.2 292 65.1
TWI81G0852 Tripterygium wilfordii HOM05D006519 ORTHO05D008306 1.5e-103 380.2 283 67.5
Ciclev10021480m.g Citrus clementina HOM05D006519 ORTHO05D008306 2.0e-103 379.8 274 67.9
FvH4_5g16400 Fragaria vesca HOM05D006519 ORTHO05D008306 2.6e-103 379.4 279 68.1
CiPaw.11G031700 Carya illinoinensis HOM05D006519 ORTHO05D008306 3.4e-103 379.0 281 68.3
HanXRQChr09g0271821 Helianthus annuus HOM05D006519 ORTHO05D008306 4.5e-103 378.6 282 67.4
Gohir.A05G415200 Gossypium hirsutum HOM05D006519 ORTHO05D008306 1.7e-102 376.7 270 70.0
MBI14_g12785_MAGBIO Magnolia biondii HOM05D006519 ORTHO05D008306 2.2e-102 376.3 271 70.5
Lsat_1_v5_gn_4_73480 Lactuca sativa HOM05D006519 ORTHO05D008306 2.9e-102 375.9 282 67.0
AUR62008282 Chenopodium quinoa HOM05D006519 ORTHO05D008306 6.5e-102 374.8 270 66.7
MSTRG.11426 Avicennia marina HOM05D006519 ORTHO05D008306 8.4e-102 374.4 287 68.3
Sc12g0005660 Simmondsia chinensis HOM05D006519 ORTHO05D008306 8.4e-102 374.4 275 69.5
PGSC0003DMG400024585 Solanum tuberosum HOM05D006519 ORTHO05D008306 2.1e-100 369.8 275 66.2
FAN08G1114 Fragaria x ananassa HOM05D006519 ORTHO05D008306 2.7e-100 369.4 277 66.4
Sed0010209 Sechium edule HOM05D006519 ORTHO05D008306 2.7e-100 369.4 283 68.9
Solyc03g113860.2 Solanum lycopersicum HOM05D006519 ORTHO05D008306 1.8e-99 366.7 272 66.2
CsaV3_1G008220 Cucumis sativus L. HOM05D006519 ORTHO05D008306 2.5e-98 362.8 275 67.3
Sopen03g032910 Solanum pennellii HOM05D006519 ORTHO05D008306 3.3e-98 362.5 272 65.8
SalBow5G4476 Salvia bowleyana HOM05D006519 ORTHO05D008306 4.3e-98 362.1 325 58.2
SalBow5G0752 Salvia bowleyana HOM05D006519 ORTHO05D008306 5.7e-98 361.7 325 58.2
THA.LOC104809258 Tarenaya hassleriana HOM05D006519 ORTHO05D008306 5.7e-98 361.7 290 62.1
EL10Ac5g10829 Beta vulgaris HOM05D006519 ORTHO05D008306 1.3e-97 360.5 326 56.7
CAN.G853.13 Capsicum annuum HOM05D006519 ORTHO05D008306 3.7e-97 359.0 275 65.5
PSO591G0501 Papaver somniferum HOM05D006519 ORTHO05D008306 3.7e-97 359.0 315 59.7
Rhsim12G0161700 Rhododendron simsii HOM05D006519 ORTHO05D008306 2.4e-96 356.3 285 67.7
MELO3C002238.2 Cucumis melo HOM05D006519 ORTHO05D008306 2.6e-95 352.8 275 67.6
TPR.G37507 Trifolium pratense HOM05D006519 ORTHO05D008306 2.6e-95 352.8 268 65.3
Lj4g0003537 Lotus japonicus HOM05D006519 ORTHO05D008306 4.5e-95 352.1 277 65.0
Lalb_Chr07g0182571 Lupinus albus HOM05D006519 ORTHO05D008306 2.2e-94 349.7 271 63.8
ClCG01G014120 Citrullus lanatus HOM05D006519 ORTHO05D008306 2.9e-94 349.4 261 67.0
Medtr4g106410 Medicago truncatula HOM05D006519 ORTHO05D008306 2.9e-94 349.4 267 64.0
Atru.chr9.2404 Acer truncatum HOM05D006519 ORTHO05D008306 8.4e-94 347.8 274 66.1
Psat0s1227g0160 Pisum sativum HOM05D006519 ORTHO05D008306 8.4e-94 347.8 268 64.2
Glyma.05G033800 Glycine max HOM05D006519 ORTHO05D008306 3.2e-93 345.9 268 64.2
PGR083G2560 Punica granatum HOM05D006519 ORTHO05D008306 7.2e-93 344.7 268 65.7
AT5G50110 Arabidopsis thaliana HOM05D006519 ORTHO05D008306 1.2e-92 344.0 273 62.3
arahy.Tifrunner.gnm1.ann1.L198ZR Arachis hypogaea HOM05D006519 ORTHO05D008306 4.6e-92 342.0 290 60.3
Carub.0008s1012 Capsella rubella HOM05D006519 ORTHO05D008306 1.8e-91 340.1 278 60.4
Ca_21889_v3 Cicer arietinum L. HOM05D006519 ORTHO05D008306 3.0e-91 339.3 268 63.4
arahy.Tifrunner.gnm1.ann1.IBQC5J Arachis hypogaea HOM05D006519 ORTHO05D008306 1.1e-90 337.4 290 59.3
Sp6g11980 Schrenkiella parvula HOM05D006519 ORTHO05D008306 1.5e-90 337.0 281 59.4
COL.COLO4_04635 Corchorus olitorius HOM05D006519 ORTHO05D008306 1.6e-89 333.6 255 69.8
CARHR258520 Cardamine hirsuta HOM05D006519 ORTHO05D008306 2.2e-89 333.2 276 59.4
Aa31sc174G50 Aethionema arabicum HOM05D006519 ORTHO05D008306 1.4e-88 330.5 297 56.2
BcaB01g02918 Brassica carinata HOM05D006519 ORTHO05D008306 1.4e-88 330.5 281 58.0
BraA03t11979Z Brassica rapa HOM05D006519 ORTHO05D008306 5.3e-88 328.6 301 56.5
A03p27660 Brassica napus HOM05D006519 ORTHO05D008306 3.4e-87 325.9 280 58.9
Peaxi162Scf00017g02523 Petunia axillaris HOM05D006519 ORTHO05D008306 7.7e-87 324.7 210 75.2
BcaC01g04830 Brassica carinata HOM05D006519 ORTHO05D008306 1.3e-86 323.9 286 58.7
BolC3t15659H Brassica oleracea HOM05D006519 ORTHO05D008306 2.2e-86 323.2 286 58.4
C03p33370 Brassica napus HOM05D006519 ORTHO05D008306 1.4e-85 320.5 286 58.0
Lj9C454G3 Lonicera japonica HOM05D006519 ORTHO05D008306 3.6e-84 315.8 275 60.0
ATR0314G030 Amborella trichopoda HOM05D006519 ORTHO05D008306 8.8e-83 311.2 231 65.4
Eucgr.B00339 Eucalyptus grandis HOM05D006519 ORTHO05D008306 1.1e-82 310.8 209 71.8
SGA_v2.0_scaffold467G52031 Striga asiatica HOM05D006519 ORTHO05D008306 2.5e-82 309.7 261 62.1
AUR62031043 Chenopodium quinoa HOM05D006519 ORTHO05D008306 1.3e-81 307.4 218 67.4
Thhalv10014373m.g Eutrema salsugineum HOM05D006519 ORTHO05D008306 4.1e-80 302.4 284 56.0
Zm00001eb279990 Zea mays HOM05D006519 ORTHO05D008306 2.0e-79 300.1 230 63.0
AL8G24100 Arabidopsis lyrata HOM05D006519 ORTHO05D008306 1.1e-77 294.3 209 65.1
Phvul.003G197000 Phaseolus vulgaris HOM05D006519 ORTHO05D008306 2.5e-77 293.1 197 71.1
unitig_62.g23572 Utricularia gibba HOM05D006519 ORTHO05D008306 2.0e-74 283.5 244 58.6
Mapoly0003s0145 Marchantia polymorpha HOM05D006519 ORTHO05D008306 1.3e-73 280.8 247 57.1
Pp3c21_11830 Physcomitrium patens HOM05D006519 ORTHO05D008306 5.3e-72 275.4 234 57.7
vmacro16588 Vaccinium macrocarpon HOM05D006519 ORTHO05D008306 9.1e-72 274.6 183 76.0
Hma1.2p1_0002F.1_g002810 Hydrangea macrophylla HOM05D006519 ORTHO05D008306 1.8e-67 260.4 223 62.3
SMO236G0037 Selaginella moellendorffii HOM05D006519 ORTHO05D008306 1.4e-64 250.8 221 55.7
Manes.06G100700 Manihot esculenta HOM05D006519 ORTHO05D008306 2.9e-62 243.0 190 63.2
MD14G1186100 Malus domestica HOM05D006519 ORTHO05D008306 9.4e-61 238.0 213 58.7
Hma1.2p1_0002F.1_g002800 Hydrangea macrophylla HOM05D006519 ORTHO05D008306 1.5e-58 230.7 166 68.1
MD14G1186900 Malus domestica HOM05D006519 ORTHO05D008306 5.0e-54 215.7 166 67.5
MD13G1183500 Malus domestica HOM05D006519 ORTHO05D008306 8.5e-54 214.9 163 65.0
VMungo1215G1861 Vigna mungo HOM05D006519 ORTHO05D008306 3.2e-53 213.0 209 55.0
Nitab4.5_0001642g0020 Nicotiana tabacum HOM05D006519 ORTHO05D008306 5.2e-51 205.7 133 75.2
HPP92_010835 Vanilla planifolia HOM05D006519 ORTHO05D008306 1.6e-47 194.1 161 60.9
AagrBONN_evm.TU.Sc2ySwM_228.2029 Anthoceros agrestis HOM05D006519 ORTHO05D008306 7.7e-47 191.8 177 55.4
Actinidia19081 Actinidia chinensis HOM05D006519 ORTHO05D008306 2.5e-45 186.8 141 68.8
Cre09.g394584 Chlamydomonas reinhardtii HOM05D006519 ORTHO05D008306 1.2e-44 184.5 305 40.3
MCO15G300 Micromonas commoda HOM05D006519 ORTHO05D008306 1.0e-43 181.4 239 47.3
Cpa.g.sc35.56 Carica papaya HOM05D006519 ORTHO05D008306 1.6e-36 157.5 100 74.0
SEGI_15669 Sequoiadendron giganteum HOM05D006519 ORTHO05D008306 5.2e-35 152.5 189 46.0
Nitab4.5_0001642g0010 Nicotiana tabacum HOM05D006519 ORTHO05D008306 1.2e-34 151.4 143 53.1
Glyma.17G093302 Glycine max HOM05D006519 ORTHO05D008306 2.2e-33 147.1 102 69.6
HanXRQChr11g0328331 Helianthus annuus HOM05D006519 ORTHO05D008306 1.2e-31 141.4 98 64.3
C05p16930 Brassica napus HOM05D006519 ORTHO05D008306 7.3e-29 132.1 98 64.3
arahy.Tifrunner.gnm1.ann1.J4WABN Arachis hypogaea HOM05D006519 ORTHO05D008306 1.8e-27 127.5 97 58.8
arahy.Tifrunner.gnm1.ann1.KZGX7R Arachis hypogaea HOM05D006519 ORTHO05D008306 1.8e-27 127.5 104 57.7
Os06g0239000 Oryza sativa ssp. japonica HOM05D006519 ORTHO05D008306 1.8e-27 127.5 101 63.4
CDE06G0478 Ceratophyllum demersum HOM05D006519 ORTHO05D008306 2.3e-27 127.1 83 73.5
Dinv20697 Davidia involucrata HOM05D006519 ORTHO05D008306 2.9e-25 120.2 121 54.5
arahy.Tifrunner.gnm1.ann1.9L22J7 Arachis hypogaea HOM05D006519 ORTHO05D014446 5.1e-22 109.4 103 51.5
PRCOL_00000545 Prasinoderma coloniale HOM05D006519 ORTHO05D008306 1.4e-19 101.3 229 32.8
BcaC05g25762 Brassica carinata HOM05D006519 ORTHO05D008306 3.1e-19 100.1 79 60.8
CBR_g30328 Chara braunii HOM05D000019 ORTHO05D000048 1.3e-17 94.7 101 54.5
arahy.Tifrunner.gnm1.ann1.MFZI3Y Arachis hypogaea HOM05D005365 ORTHO05D006910 4.9e-17 92.8 84 52.4
arahy.Tifrunner.gnm1.ann1.4TMU9W Arachis hypogaea HOM05D005365 ORTHO05D006910 3.5e-15 86.7 68 58.8
arahy.Tifrunner.gnm1.ann1.RNN7F2 Arachis hypogaea HOM05D006519 ORTHO05D008306 7.8e-15 85.5 99 47.5
SEGI_16810 Sequoiadendron giganteum HOM05D006519 ORTHO05D008306 1.2e-12 78.2 49 71.4
arahy.Tifrunner.gnm1.ann1.PY279F Arachis hypogaea HOM05D006519 ORTHO05D008306 2.1e-12 77.4 65 58.5
Potri.015G071001 Populus trichocarpa HOM05D006519 ORTHO05D008306 4.0e-11 73.2 53 66.0


User provided reference genes

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