Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018079 Camellia sinensis var. sinensis HOM05D007709 ORTHO05D009577 3.9e-33 144.4 84 100.0
CSS0032875 Camellia sinensis var. sinensis HOM05D007709 ORTHO05D009577 3.9e-33 144.4 84 100.0
Peaxi162Scf00362g00133 Petunia axillaris HOM05D007709 ORTHO05D009577 5.1e-17 90.9 87 51.7
CSS0014347 Camellia sinensis var. sinensis HOM05D007709 ORTHO05D009577 8.6e-17 90.1 81 54.3
Migut.N01357 Erythranthe guttata HOM05D007709 ORTHO05D009577 6.2e-15 84.0 87 48.3
Atru.chr5.3536 Acer truncatum HOM05D007709 ORTHO05D009577 5.2e-14 80.9 85 50.6
CSS0015820 Camellia sinensis var. sinensis HOM05D007709 ORTHO05D009577 8.9e-14 80.1 81 50.6
Nn5g30992 Nelumbo nucifera HOM05D007709 ORTHO05D009577 4.4e-13 77.8 83 47.0
HanXRQChr16g0501351 Helianthus annuus HOM05D007709 ORTHO05D009577 2.9e-12 75.1 85 43.5
Nitab4.5_0000783g0120 Nicotiana tabacum HOM05D007709 ORTHO05D009577 3.8e-12 74.7 67 50.7
Aqoxy6G01622 Aquilegia oxysepala HOM05D007709 ORTHO05D009577 1.1e-11 73.2 77 49.4
CAN.G1725.3 Capsicum annuum HOM05D007709 ORTHO05D009577 1.4e-11 72.8 85 47.1
Haze_02011 Corylus avellana HOM05D007709 ORTHO05D009577 3.2e-11 71.6 83 45.8
Ciclev10029706m.g Citrus clementina HOM05D007709 ORTHO05D009577 4.1e-11 71.2 69 50.7
Carub.0004s0246 Capsella rubella HOM05D007709 ORTHO05D009577 2.5e-08 62.0 81 44.4
Medtr8g012330 Medicago truncatula HOM05D001671 ORTHO05D001844 2.5e-08 62.0 78 43.6
Rhsim05G0047200 Rhododendron simsii HOM05D007709 ORTHO05D009577 3.3e-08 61.6 102 37.3
AT2G23240 Arabidopsis thaliana HOM05D007709 ORTHO05D009577 4.3e-08 61.2 77 41.6
Lj3g0026575 Lotus japonicus HOM05D007709 ORTHO05D009577 4.3e-08 61.2 84 42.9
AL4G13130 Arabidopsis lyrata HOM05D007709 ORTHO05D009577 5.6e-08 60.8 77 41.6
Sopen01g054290 Solanum pennellii HOM05D007709 ORTHO05D009577 7.3e-08 60.5 83 50.6
CiPaw.05G092600 Carya illinoinensis HOM05D007709 ORTHO05D009577 9.6e-08 60.1 79 41.8
arahy.Tifrunner.gnm1.ann1.9G47NZ Arachis hypogaea HOM05D007709 ORTHO05D009577 1.2e-07 59.7 83 42.2
Sp4g00020 Schrenkiella parvula HOM05D007709 ORTHO05D009577 1.6e-07 59.3 62 48.4
TWI31G1411 Tripterygium wilfordii HOM05D007709 ORTHO05D009577 1.6e-07 59.3 62 43.5
COL.COLO4_34305 Corchorus olitorius HOM05D007709 ORTHO05D009577 2.8e-07 58.5 69 46.4
Sc14g0002460 Simmondsia chinensis HOM05D007709 ORTHO05D009577 2.8e-07 58.5 84 41.7
BcaC01g04855 Brassica carinata HOM05D007709 ORTHO05D009577 3.6e-07 58.2 67 43.3
C03p33100 Brassica napus HOM05D007709 ORTHO05D009577 3.6e-07 58.2 67 43.3
BolC3t15636H Brassica oleracea HOM05D007709 ORTHO05D009577 3.6e-07 58.2 67 43.3
Lalb_Chr07g0194411 Lupinus albus HOM05D007709 ORTHO05D009577 3.6e-07 58.2 77 35.1
BcaB01g02955 Brassica carinata HOM05D007709 ORTHO05D009577 6.2e-07 57.4 72 40.3
Cpa.g.sc60.30 Carica papaya HOM05D007709 ORTHO05D009577 6.2e-07 57.4 83 38.6
Cc04_g09140 Coffea canephora HOM05D007709 ORTHO05D009577 6.2e-07 57.4 78 42.3
Eucgr.I01530 Eucalyptus grandis HOM05D007709 ORTHO05D009577 1.1e-06 56.6 58 37.9
QL03p016617 Quercus lobata HOM05D007709 ORTHO05D009577 1.1e-06 56.6 65 41.5
QL11p056180 Quercus lobata HOM05D007709 ORTHO05D009577 1.1e-06 56.6 65 41.5
CARHR292840 Cardamine hirsuta HOM05D007709 ORTHO05D009577 1.4e-06 56.2 54 50.0
Potri.009G167700 Populus trichocarpa HOM05D007709 ORTHO05D009577 1.4e-06 56.2 87 39.1
A03p27450 Brassica napus HOM05D007709 ORTHO05D009577 1.8e-06 55.8 67 41.8
BraA03t11957Z Brassica rapa HOM05D007709 ORTHO05D009577 1.8e-06 55.8 67 41.8
CANSAT25G2121 Cannabis sativa HOM05D007709 ORTHO05D009577 1.8e-06 55.8 66 37.9
Carub.0004s2433 Capsella rubella HOM05D007709 ORTHO05D009577 2.4e-06 55.5 83 38.6
Cfa005362 Carpinus fangiana HOM05D007709 ORTHO05D009577 2.4e-06 55.5 62 41.9
QL03p016612 Quercus lobata HOM05D007709 ORTHO05D009577 2.4e-06 55.5 71 42.3
QL03p016621 Quercus lobata HOM05D007709 ORTHO05D009577 2.4e-06 55.5 81 37.0
QL11p056189 Quercus lobata HOM05D007709 ORTHO05D009577 2.4e-06 55.5 71 42.3
QL11p056199 Quercus lobata HOM05D007709 ORTHO05D009577 2.4e-06 55.5 81 37.0
QL11p056219 Quercus lobata HOM05D007709 ORTHO05D009577 2.4e-06 55.5 71 42.3
AL4G40360 Arabidopsis lyrata HOM05D007709 ORTHO05D009577 3.1e-06 55.1 68 45.6
Cfa005363 Carpinus fangiana HOM05D007709 ORTHO05D009577 4.0e-06 54.7 67 41.8
SalBow5G1409 Salvia bowleyana HOM05D007709 ORTHO05D009577 4.0e-06 54.7 92 41.3
SalBow5G2601 Salvia bowleyana HOM05D007709 ORTHO05D009577 4.0e-06 54.7 92 41.3
MELO3C013494.2 Cucumis melo HOM05D007709 ORTHO05D009577 5.2e-06 54.3 57 40.4
DCAR_026620 Daucus carota HOM05D007709 ORTHO05D009577 5.2e-06 54.3 64 39.1
Thhalv10000588m.g Eutrema salsugineum HOM05D007709 ORTHO05D009577 6.9e-06 53.9 81 42.0
TPR.G29157 Trifolium pratense HOM05D007709 ORTHO05D009577 6.9e-06 53.9 82 40.2


User provided reference genes

Program Settings