Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018066 Camellia sinensis var. sinensis HOM05D007181 ORTHO05D008722 3.0e-119 431.8 208 100.0
CSS0010421 Camellia sinensis var. sinensis HOM05D007181 ORTHO05D008722 8.2e-109 397.1 202 95.0
Actinidia19968 Actinidia chinensis HOM05D007181 ORTHO05D008722 3.1e-76 288.9 199 69.3
Hma1.2p1_0760F.1_g214120 Hydrangea macrophylla HOM05D007181 ORTHO05D008722 4.1e-76 288.5 200 70.0
Dinv32881 Davidia involucrata HOM05D007181 ORTHO05D008722 1.7e-74 283.1 203 68.0
Hma1.2p1_1332F.1_g276040 Hydrangea macrophylla HOM05D007181 ORTHO05D008722 8.0e-72 274.2 204 69.1
vmacro02617 Vaccinium macrocarpon HOM05D007181 ORTHO05D008722 1.6e-64 250.0 203 62.6
Rhsim13G0029700 Rhododendron simsii HOM05D007181 ORTHO05D008722 1.3e-61 240.4 206 61.2
GSVIVG01003131001 Vitis vinifera HOM05D007181 ORTHO05D008722 2.7e-59 232.6 205 58.0
Nn8g40634 Nelumbo nucifera HOM05D007181 ORTHO05D008722 1.2e-54 217.2 193 58.5
Nn8g40635 Nelumbo nucifera HOM05D007181 ORTHO05D008722 1.5e-54 216.9 193 58.0
Lj2P1163T10 Lonicera japonica HOM05D007181 ORTHO05D008722 9.8e-54 214.2 178 59.6
AUR62032277 Chenopodium quinoa HOM05D007181 ORTHO05D008722 1.7e-53 213.4 201 54.7
arahy.Tifrunner.gnm1.ann1.M9RGYA Arachis hypogaea HOM05D007181 ORTHO05D008722 1.1e-52 210.7 194 55.7
AUR62011964 Chenopodium quinoa HOM05D007181 ORTHO05D008722 2.7e-51 206.1 202 52.0
Haze_04637 Corylus avellana HOM05D000129 ORTHO05D000144 2.7e-51 206.1 202 51.5
Haze_04636 Corylus avellana HOM05D007181 ORTHO05D008722 1.3e-50 203.8 202 51.0
MBI13_g01691_MAGBIO Magnolia biondii HOM05D007181 ORTHO05D008722 6.6e-50 201.4 204 53.9
EL10Ac5g10486 Beta vulgaris HOM05D007181 ORTHO05D008722 1.1e-49 200.7 192 54.7
PGSC0003DMG400004278 Solanum tuberosum HOM05D007181 ORTHO05D008722 2.5e-49 199.5 203 52.7
CDE06G2554 Ceratophyllum demersum HOM05D007181 ORTHO05D008722 9.5e-49 197.6 196 53.1
Nitab4.5_0003555g0080 Nicotiana tabacum HOM05D007181 ORTHO05D008722 6.2e-48 194.9 203 51.2
CANSAT25G0029 Cannabis sativa HOM05D007181 ORTHO05D008722 6.8e-47 191.4 204 48.5
Solyc12g100320.2 Solanum lycopersicum HOM05D007181 ORTHO05D008722 6.8e-47 191.4 202 50.5
Prupe.8G234100 Prunus persica HOM05D007181 ORTHO05D008722 8.9e-47 191.0 199 49.7
Cc00_g18800 Coffea canephora HOM05D007181 ORTHO05D008722 2.0e-46 189.9 200 48.5
Lj1g0009574 Lotus japonicus HOM05D007181 ORTHO05D008722 2.0e-46 189.9 199 51.8
Sopen12g034950 Solanum pennellii HOM05D007181 ORTHO05D008722 3.4e-46 189.1 203 49.8
CAN.G575.12 Capsicum annuum HOM05D007181 ORTHO05D008722 4.4e-46 188.7 203 50.7
Ciclev10022317m.g Citrus clementina HOM05D007181 ORTHO05D008722 4.4e-46 188.7 197 51.8
Peaxi162Scf00146g10111 Petunia axillaris HOM05D007181 ORTHO05D008722 7.5e-46 188.0 203 51.2
CiPaw.08G110300 Carya illinoinensis HOM05D007181 ORTHO05D008722 2.2e-45 186.4 204 48.0
RcHm_v2.0_Chr6g0289821 Rosa chinensis HOM05D007181 ORTHO05D008722 3.7e-45 185.7 200 50.0
Ah.11g050140 Amaranthus hybridus HOM05D007181 ORTHO05D008722 1.1e-44 184.1 206 47.6
Potri.002G047400 Populus trichocarpa HOM05D007181 ORTHO05D008722 1.1e-44 184.1 200 48.5
Gohir.A05G078500 Gossypium hirsutum HOM05D000144 ORTHO05D008722 1.4e-44 183.7 199 46.7
Phvul.001G155300 Phaseolus vulgaris HOM05D007181 ORTHO05D008722 3.2e-44 182.6 198 50.0
Thecc.01G270500 Theobroma cacao HOM05D007181 ORTHO05D008722 4.1e-44 182.2 197 48.7
Lsat_1_v5_gn_5_185100 Lactuca sativa HOM05D007181 ORTHO05D008722 9.2e-44 181.0 214 49.1
HPP92_028259 Vanilla planifolia HOM05D007181 ORTHO05D008722 1.6e-43 180.3 143 60.1
Glyma.19G160000 Glycine max HOM05D007181 ORTHO05D008722 2.1e-43 179.9 199 51.3
Gorai.007G100900 Gossypium raimondii HOM05D007181 ORTHO05D008722 7.8e-43 177.9 197 46.7
MD03G1257200 Malus domestica HOM05D007181 ORTHO05D008722 7.8e-43 177.9 197 46.7
Gorai.004G217700 Gossypium raimondii HOM05D007181 ORTHO05D008722 1.0e-42 177.6 197 47.2
Duzib211G0516 Durio zibethinus HOM05D007181 ORTHO05D008722 1.7e-42 176.8 197 47.7
PSO210G2677 Papaver somniferum HOM05D007181 ORTHO05D008722 3.0e-42 176.0 146 61.6
VMungo1383G2224 Vigna mungo HOM05D007181 ORTHO05D008722 3.9e-42 175.6 200 47.5
Gohir.D11G094500 Gossypium hirsutum HOM05D007181 ORTHO05D008722 5.1e-42 175.3 199 46.7
TPR.G19095 Trifolium pratense HOM05D007181 ORTHO05D008722 1.5e-41 173.7 195 48.7
Aqoxy7G04176 Aquilegia oxysepala HOM05D007181 ORTHO05D008722 1.9e-41 173.3 198 47.0
Medtr7g095740 Medicago truncatula HOM05D007181 ORTHO05D008722 2.5e-41 172.9 195 49.2
Manes.05G082200 Manihot esculenta HOM05D007181 ORTHO05D008722 9.5e-41 171.0 200 47.0
Atru.chr5.1530 Acer truncatum HOM05D007181 ORTHO05D008722 8.1e-40 167.9 196 46.9
Aa31LG10G17220 Aethionema arabicum HOM05D007181 ORTHO05D008722 8.1e-40 167.9 197 44.7
Sabra02G0038300 Salix brachista HOM05D007181 ORTHO05D008722 8.1e-40 167.9 144 55.6
Gohir.D08G205700 Gossypium hirsutum HOM05D007181 ORTHO05D008722 1.8e-39 166.8 157 51.0
Cpa.g.sc52.129 Carica papaya HOM05D007181 ORTHO05D008722 3.1e-39 166.0 202 45.5
Oeu025775.1 Olea europaea HOM05D007181 ORTHO05D008722 4.0e-39 165.6 151 51.0
SalBow4G0298 Salvia bowleyana HOM05D007181 ORTHO05D008722 1.5e-38 163.7 202 43.1
SalBow4G3342 Salvia bowleyana HOM05D007181 ORTHO05D008722 1.5e-38 163.7 202 43.1
SalBow6G6987 Salvia bowleyana HOM05D007181 ORTHO05D008722 1.5e-38 163.7 198 43.4
SGA_v2.0_scaffold1G00542 Striga asiatica HOM05D007181 ORTHO05D008722 4.4e-38 162.2 203 41.9
COL.COLO4_09179 Corchorus olitorius HOM05D007181 ORTHO05D008722 1.3e-37 160.6 199 45.7
Gohir.A08G187400 Gossypium hirsutum HOM05D007181 ORTHO05D008722 1.3e-37 160.6 198 44.9
PSO210G2070 Papaver somniferum HOM05D007181 ORTHO05D008722 1.3e-37 160.6 140 57.9
Sed0014767 Sechium edule HOM05D007181 ORTHO05D008722 4.9e-37 158.7 197 44.7
FvH4_2g22890 Fragaria vesca HOM05D007181 ORTHO05D008722 8.3e-37 157.9 199 44.7
A09p55080 Brassica napus HOM05D007181 ORTHO05D008722 3.2e-36 156.0 194 46.4
THA.LOC104817569 Tarenaya hassleriana HOM05D007181 ORTHO05D008722 3.2e-36 156.0 199 44.2
ClCG07G000510 Citrullus lanatus HOM05D007181 ORTHO05D008722 5.4e-36 155.2 158 50.6
Sc05g0001150 Simmondsia chinensis HOM05D007181 ORTHO05D008722 1.2e-35 154.1 200 45.5
BcaC07g40807 Brassica carinata HOM05D007181 ORTHO05D008722 2.1e-35 153.3 155 51.0
C08p38020 Brassica napus HOM05D007181 ORTHO05D008722 2.1e-35 153.3 155 51.0
BolC8t51376H Brassica oleracea HOM05D007181 ORTHO05D008722 2.1e-35 153.3 155 51.0
SEGI_03897 Sequoiadendron giganteum HOM05D007181 ORTHO05D008722 2.1e-35 153.3 206 43.2
Gohir.A11G090066 Gossypium hirsutum HOM05D007181 ORTHO05D008722 2.7e-35 152.9 158 46.8
BraA09t40915Z Brassica rapa HOM05D007181 ORTHO05D008722 4.6e-35 152.1 155 50.3
QL12p042395 Quercus lobata HOM05D007181 ORTHO05D008722 1.3e-34 150.6 202 45.5
Os11g0616200 Oryza sativa ssp. japonica HOM05D007181 ORTHO05D008722 2.5e-33 146.4 196 42.9
TAR624G0264 Trochodendron aralioides HOM05D007181 ORTHO05D008722 4.3e-33 145.6 221 43.4
MD11G1277900 Malus domestica HOM05D007181 ORTHO05D008722 5.6e-33 145.2 181 43.1
MELO3C001156.2 Cucumis melo HOM05D007181 ORTHO05D008722 7.3e-33 144.8 109 63.3
Ca_20981_v3 Cicer arietinum L. HOM05D007181 ORTHO05D008722 2.8e-32 142.9 132 53.0
HanXRQChr01g0005991 Helianthus annuus HOM05D007181 ORTHO05D008722 3.6e-32 142.5 197 40.6
Sp5g00160 Schrenkiella parvula HOM05D007181 ORTHO05D008722 6.8e-31 138.3 155 46.5
AL5G46250 Arabidopsis lyrata HOM05D007181 ORTHO05D008722 8.9e-31 137.9 172 43.6
CsaV3_2G013840 Cucumis sativus L. HOM05D007181 ORTHO05D008722 8.9e-31 137.9 106 61.3
SMO143G0136 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 2.0e-30 136.7 134 50.7
PGR044G0699 Punica granatum HOM05D007181 ORTHO05D008722 5.8e-30 135.2 199 39.7
BcaB03g13697 Brassica carinata HOM05D007181 ORTHO05D008722 3.8e-29 132.5 156 45.5
Carub.0005s3001 Capsella rubella HOM05D007181 ORTHO05D008722 8.4e-29 131.3 172 43.6
Thhalv10006272m.g Eutrema salsugineum HOM05D007181 ORTHO05D008722 1.4e-28 130.6 135 48.9
Pp3c24_16150 Physcomitrium patens HOM05D007181 ORTHO05D008722 3.2e-28 129.4 144 42.4
AT3G63390 Arabidopsis thaliana HOM05D007181 ORTHO05D008722 1.6e-27 127.1 170 44.7
CARHR291580 Cardamine hirsuta HOM05D007181 ORTHO05D008722 7.8e-27 124.8 170 41.2
FAN24G0107 Fragaria x ananassa HOM05D007181 ORTHO05D008722 7.8e-27 124.8 176 41.5
Pp3c8_19140 Physcomitrium patens HOM05D007181 ORTHO05D008722 6.6e-26 121.7 134 44.8
SHI10021 Sapria himalayana HOM05D007181 ORTHO05D008722 1.1e-25 120.9 147 44.9
AagrBONN_evm.TU.Sc2ySwM_362.2054 Anthoceros agrestis HOM05D007181 ORTHO05D008722 5.6e-25 118.6 147 42.2
Zm00001eb166760 Zea mays HOM05D007181 ORTHO05D008722 9.6e-25 117.9 139 46.0
Psat3g061320 Pisum sativum HOM05D007181 ORTHO05D008722 4.0e-23 112.5 195 39.0
VMungo1215G0236 Vigna mungo HOM05D007181 ORTHO05D008722 4.0e-23 112.5 118 48.3
BcaC07g42693 Brassica carinata HOM05D007181 ORTHO05D008722 1.3e-18 97.4 155 38.7
Mapoly0126s0033 Marchantia polymorpha HOM05D007181 ORTHO05D008722 3.9e-18 95.9 147 37.4
ATR0099G072 Amborella trichopoda HOM05D007181 ORTHO05D008722 8.1e-16 88.2 77 53.2
ATR0099G083 Amborella trichopoda HOM05D007181 ORTHO05D008722 2.6e-14 83.2 62 59.7
SMO203G0031 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 2.4e-12 76.6 60 53.3
ECA248G1721 Erigeron canadensis HOM05D007181 ORTHO05D008722 4.6e-11 72.4 100 45.0
SMO203G0072 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 6.7e-10 68.6 61 49.2
CBR_g39816 Chara braunii HOM05D007181 ORTHO05D008722 8.7e-10 68.2 154 33.8


User provided reference genes

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