Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018060 Camellia sinensis var. sinensis HOM05D007380 ORTHO05D009269 1.3e-76 289.7 145 100.0
Rhsim02G0119200 Rhododendron simsii HOM05D007380 ORTHO05D009269 1.9e-51 206.1 147 76.9
Haze_06587 Corylus avellana HOM05D007380 ORTHO05D009269 1.5e-48 196.4 145 72.4
GSVIVG01003660001 Vitis vinifera HOM05D007380 ORTHO05D009269 1.9e-48 196.1 147 72.1
Gohir.A06G123100 Gossypium hirsutum HOM05D007380 ORTHO05D009269 4.3e-48 194.9 143 69.9
Cfa000344 Carpinus fangiana HOM05D007380 ORTHO05D009269 9.6e-48 193.7 145 71.0
QL05p081084 Quercus lobata HOM05D007380 ORTHO05D009269 1.2e-47 193.4 146 71.9
Potri.011G041800 Populus trichocarpa HOM05D007380 ORTHO05D009269 2.8e-47 192.2 145 72.4
CiPaw.10G117700 Carya illinoinensis HOM05D007380 ORTHO05D009269 8.1e-47 190.7 135 74.1
Gorai.010G149500 Gossypium raimondii HOM05D007380 ORTHO05D009269 4.0e-46 188.3 143 68.5
Ciclev10017095m.g Citrus clementina HOM05D007380 ORTHO05D009269 5.2e-46 188.0 146 68.5
Potri.004G033400 Populus trichocarpa HOM05D007380 ORTHO05D009269 1.5e-45 186.4 145 69.7
Gohir.D06G127800 Gossypium hirsutum HOM05D007380 ORTHO05D009269 2.0e-45 186.0 143 67.8
Actinidia24054 Actinidia chinensis HOM05D007380 ORTHO05D009269 2.6e-45 185.7 146 69.2
Duzib235G0816 Durio zibethinus HOM05D007380 ORTHO05D009269 3.4e-45 185.3 134 71.6
Prupe.4G035400 Prunus persica HOM05D007380 ORTHO05D009269 1.1e-43 180.3 146 67.8
TAR626G0266 Trochodendron aralioides HOM05D007380 ORTHO05D009269 1.1e-43 180.3 147 66.7
TWI63G1146 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 1.9e-43 179.5 143 67.1
Hma1.2p1_1182F.1_g264770 Hydrangea macrophylla HOM05D007380 ORTHO05D009269 4.2e-43 178.3 140 67.1
Atru.chr10.2021 Acer truncatum HOM05D007380 ORTHO05D009269 5.4e-43 177.9 148 69.6
Psat1g208920 Pisum sativum HOM05D007380 ORTHO05D009269 5.4e-43 177.9 147 66.0
PGR042G0893 Punica granatum HOM05D007380 ORTHO05D009269 5.4e-43 177.9 149 65.8
Sabra04G0019200 Salix brachista HOM05D007380 ORTHO05D009269 1.6e-42 176.4 145 65.5
Thecc.06G201000 Theobroma cacao HOM05D007380 ORTHO05D009269 2.7e-42 175.6 121 75.2
MD05G1326300 Malus domestica HOM05D007380 ORTHO05D009269 3.5e-42 175.3 143 68.5
Oeu027967.1 Olea europaea HOM05D007380 ORTHO05D009269 4.6e-42 174.9 142 66.2
FAN21G2116 Fragaria x ananassa HOM05D007380 ORTHO05D009269 6.0e-42 174.5 148 65.5
TPR.G36752 Trifolium pratense HOM05D007380 ORTHO05D009269 6.0e-42 174.5 147 65.3
Lj6g0018389 Lotus japonicus HOM05D007380 ORTHO05D009269 7.8e-42 174.1 145 66.2
CANSAT54G0392 Cannabis sativa HOM05D007380 ORTHO05D009269 1.0e-41 173.7 148 63.5
FvH4_3g03870 Fragaria vesca HOM05D007380 ORTHO05D009269 1.0e-41 173.7 148 64.9
RcHm_v2.0_Chr5g0006121 Rosa chinensis HOM05D007380 ORTHO05D009269 1.0e-41 173.7 146 67.8
Peaxi162Scf00371g00913 Petunia axillaris HOM05D007380 ORTHO05D009269 8.7e-41 170.6 148 66.2
VMungo0331G1388 Vigna mungo HOM05D007380 ORTHO05D009269 1.5e-40 169.9 145 63.4
Phvul.010G144100 Phaseolus vulgaris HOM05D007380 ORTHO05D009269 4.3e-40 168.3 145 63.4
Manes.16G019900 Manihot esculenta HOM05D007380 ORTHO05D009269 5.6e-40 167.9 136 67.6
Medtr2g011720 Medicago truncatula HOM05D007380 ORTHO05D009269 5.6e-40 167.9 146 65.1
Glyma.15G067000 Glycine max HOM05D007380 ORTHO05D009269 9.6e-40 167.2 121 75.2
unitig_26.g9377 Utricularia gibba HOM05D007380 ORTHO05D009269 2.8e-39 165.6 108 76.9
PGSC0003DMG400011277 Solanum tuberosum HOM05D007380 ORTHO05D009269 3.6e-39 165.2 152 62.5
TWI38G1816 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 3.6e-39 165.2 149 63.8
BcaNung02797 Brassica carinata HOM05D007380 ORTHO05D009269 4.8e-39 164.9 102 82.4
arahy.Tifrunner.gnm1.ann1.TYQ19L Arachis hypogaea HOM05D007380 ORTHO05D009269 1.4e-38 163.3 147 61.2
C01p15370 Brassica napus HOM05D007380 ORTHO05D009269 1.8e-38 162.9 104 80.8
BolC1t01491H Brassica oleracea HOM05D007380 ORTHO05D009269 1.8e-38 162.9 104 80.8
Nitab4.5_0002222g0060 Nicotiana tabacum HOM05D007380 ORTHO05D009269 1.8e-38 162.9 146 64.4
Solyc10g005470.3 Solanum lycopersicum HOM05D007380 ORTHO05D009269 1.8e-38 162.9 150 62.0
A01p12760 Brassica napus HOM05D007380 ORTHO05D009269 2.4e-38 162.5 106 79.2
BraA01t01220Z Brassica rapa HOM05D007380 ORTHO05D009269 2.4e-38 162.5 106 79.2
Lalb_Chr15g0090121 Lupinus albus HOM05D007380 ORTHO05D009269 2.4e-38 162.5 92 85.9
arahy.Tifrunner.gnm1.ann1.5E52J9 Arachis hypogaea HOM05D007380 ORTHO05D009269 3.1e-38 162.2 146 61.0
BcaC06g30665 Brassica carinata HOM05D007380 ORTHO05D009269 4.0e-38 161.8 102 79.4
BcaNung00855 Brassica carinata HOM05D007380 ORTHO05D009269 4.0e-38 161.8 102 79.4
C07p51220 Brassica napus HOM05D007380 ORTHO05D009269 4.0e-38 161.8 102 79.4
BolC7t45622H Brassica oleracea HOM05D007380 ORTHO05D009269 4.0e-38 161.8 102 79.4
BcaC09g51221 Brassica carinata HOM05D007380 ORTHO05D009269 5.3e-38 161.4 104 80.8
A03p52790 Brassica napus HOM05D007380 ORTHO05D009269 6.9e-38 161.0 103 81.6
BraA03t14356Z Brassica rapa HOM05D007380 ORTHO05D009269 6.9e-38 161.0 103 81.6
Sopen10g001450 Solanum pennellii HOM05D007380 ORTHO05D009269 6.9e-38 161.0 86 89.5
Sp7g19570 Schrenkiella parvula HOM05D007380 ORTHO05D009269 2.0e-37 159.5 103 80.6
MBI18_g27684_MAGBIO Magnolia biondii HOM05D007380 ORTHO05D009269 2.6e-37 159.1 135 65.9
HanXRQChr05g0131131 Helianthus annuus HOM05D007380 ORTHO05D009269 3.4e-37 158.7 145 64.8
Lsat_1_v5_gn_7_20660 Lactuca sativa HOM05D007380 ORTHO05D009269 3.4e-37 158.7 147 64.6
CARHR228120 Cardamine hirsuta HOM05D007380 ORTHO05D009269 5.8e-37 157.9 90 85.6
AL7G32620 Arabidopsis lyrata HOM05D007380 ORTHO05D009269 9.9e-37 157.1 101 79.2
AT4G21445 Arabidopsis thaliana HOM05D007380 ORTHO05D009269 9.9e-37 157.1 101 79.2
PSO210G2614 Papaver somniferum HOM05D007380 ORTHO05D009269 9.9e-37 157.1 153 58.2
ClCG00G003830 Citrullus lanatus HOM05D007380 ORTHO05D009269 1.3e-36 156.8 150 60.7
ClCG01G022490 Citrullus lanatus HOM05D007380 ORTHO05D009269 1.3e-36 156.8 150 60.7
Thhalv10026468m.g Eutrema salsugineum HOM05D007380 ORTHO05D009269 1.3e-36 156.8 104 76.9
Cc00_g03040 Coffea canephora HOM05D007380 ORTHO05D009269 3.8e-36 155.2 113 70.8
Ah.14g088860 Amaranthus hybridus HOM05D007380 ORTHO05D009269 4.9e-36 154.8 97 77.3
Eucgr.G00569 Eucalyptus grandis HOM05D007380 ORTHO05D009269 4.9e-36 154.8 84 88.1
Carub.0007s1978 Capsella rubella HOM05D007380 ORTHO05D009269 8.4e-36 154.1 119 68.9
Lsat_1_v5_gn_9_39840 Lactuca sativa HOM05D007380 ORTHO05D009269 1.4e-35 153.3 147 62.6
THA.LOC104812675 Tarenaya hassleriana HOM05D007380 ORTHO05D009269 2.4e-35 152.5 95 78.9
MELO3C007327.2 Cucumis melo HOM05D007380 ORTHO05D009269 3.2e-35 152.1 150 59.3
ECA236G0685 Erigeron canadensis HOM05D007380 ORTHO05D009269 3.2e-35 152.1 155 56.8
Aa31LG6G3460 Aethionema arabicum HOM05D007380 ORTHO05D009269 4.2e-35 151.8 123 65.9
EL10Ac8g20541 Beta vulgaris HOM05D007380 ORTHO05D009269 4.2e-35 151.8 153 57.5
Sed0001213 Sechium edule HOM05D007380 ORTHO05D009269 5.4e-35 151.4 147 60.5
AUR62012486 Chenopodium quinoa HOM05D007380 ORTHO05D009269 7.1e-35 151.0 84 85.7
Glyma.13G246900 Glycine max HOM05D007380 ORTHO05D009269 7.1e-35 151.0 92 82.6
ATR0693G221 Amborella trichopoda HOM05D007380 ORTHO05D009269 2.1e-34 149.4 119 64.7
AUR62014709 Chenopodium quinoa HOM05D007380 ORTHO05D009269 2.7e-34 149.1 146 58.9
CsaV3_6G049660 Cucumis sativus L. HOM05D007380 ORTHO05D009269 7.9e-34 147.5 150 57.3
CDE04G1327 Ceratophyllum demersum HOM05D007380 ORTHO05D009269 1.0e-33 147.1 102 75.5
FAN25G1236 Fragaria x ananassa HOM05D007380 ORTHO05D009269 3.0e-33 145.6 74 93.2
Os04g0635700 Oryza sativa ssp. japonica HOM05D007380 ORTHO05D009269 8.7e-33 144.1 85 82.4
Zm00001eb413340 Zea mays HOM05D007380 ORTHO05D009269 1.1e-32 143.7 82 84.1
Aqoxy1G03898 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 1.5e-32 143.3 89 78.7
DCAR_024159 Daucus carota HOM05D007380 ORTHO05D009269 6.9e-30 134.4 74 85.1
Actinidia11813 Actinidia chinensis HOM05D007380 ORTHO05D009269 7.6e-29 131.0 146 57.5
Nitab4.5_0001007g0090 Nicotiana tabacum HOM05D007380 ORTHO05D009269 6.4e-28 127.9 146 54.8
Lj2P279T21 Lonicera japonica HOM05D007380 ORTHO05D009269 1.4e-27 126.7 71 84.5
SEGI_03473 Sequoiadendron giganteum HOM05D007380 ORTHO05D009269 1.4e-27 126.7 88 65.9
Pp3c5_24580 Physcomitrium patens HOM05D007380 ORTHO05D009269 3.2e-27 125.6 80 70.0
Mapoly0097s0056 Marchantia polymorpha HOM05D007380 ORTHO05D009269 1.6e-26 123.2 92 64.1
AagrBONN_evm.TU.Sc2ySwM_228.835 Anthoceros agrestis HOM05D007380 ORTHO05D009269 1.9e-24 116.3 94 60.6
CBR_g3310 Chara braunii HOM05D007380 ORTHO05D009269 4.8e-23 111.7 85 63.5
SMO117G0257 Selaginella moellendorffii HOM05D007380 ORTHO05D009269 3.4e-21 105.5 83 60.2
FAN11G1927 Fragaria x ananassa HOM05D007380 ORTHO05D009269 4.9e-20 101.7 52 90.4
PSO832G0352 Papaver somniferum HOM05D007380 ORTHO05D009269 4.2e-19 98.6 109 55.0
MD10G1304300 Malus domestica HOM05D007380 ORTHO05D009269 1.5e-16 90.1 70 72.9
FvH4_3g03820 Fragaria vesca HOM05D007380 ORTHO05D009269 6.3e-15 84.7 83 57.8
BcaNung00854 Brassica carinata HOM05D007380 ORTHO05D009269 1.7e-07 60.1 48 62.5


User provided reference genes

Program Settings