Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018042 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 1.8e-78 295.8 150 100.0
CSS0005301 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 2.4e-38 162.5 180 57.2
CSS0026635 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 1.2e-37 160.2 180 56.7
Actinidia35692 Actinidia chinensis HOM05D006312 ORTHO05D007843 5.3e-17 91.7 162 43.2
Actinidia28758 Actinidia chinensis HOM05D006312 ORTHO05D007843 1.5e-16 90.1 162 41.4
Psat3g060840 Pisum sativum HOM05D006312 ORTHO05D007843 1.7e-15 86.7 69 63.8
Lalb_Chr01g0019941 Lupinus albus HOM05D006312 ORTHO05D007843 2.2e-15 86.3 66 71.2
AUR62032612 Chenopodium quinoa HOM05D006312 ORTHO05D007843 2.9e-15 85.9 52 78.8
Medtr7g095930 Medicago truncatula HOM05D006312 ORTHO05D007843 2.9e-15 85.9 51 82.4
AUR62031725 Chenopodium quinoa HOM05D006312 ORTHO05D007843 3.8e-15 85.5 52 76.9
Dinv28290 Davidia involucrata HOM05D006312 ORTHO05D007843 5.0e-15 85.1 127 46.5
Cfa007119 Carpinus fangiana HOM05D006312 ORTHO05D007843 6.5e-15 84.7 57 73.7
Ca_08638_v3 Cicer arietinum L. HOM05D006312 ORTHO05D007843 6.5e-15 84.7 51 82.4
Haze_03648 Corylus avellana HOM05D006312 ORTHO05D007843 6.5e-15 84.7 57 73.7
MD02G1107600 Malus domestica HOM05D006312 ORTHO05D007843 6.5e-15 84.7 51 82.4
CiPaw.08G182900 Carya illinoinensis HOM05D006312 ORTHO05D007843 8.5e-15 84.3 77 57.1
Gohir.D13G006900 Gossypium hirsutum HOM05D006312 ORTHO05D007843 8.5e-15 84.3 82 53.7
Gorai.013G007100 Gossypium raimondii HOM05D006312 ORTHO05D007843 8.5e-15 84.3 82 53.7
Eucgr.J02573 Eucalyptus grandis HOM05D006312 ORTHO05D007843 1.1e-14 84.0 82 53.7
PGR102G2008 Punica granatum HOM05D006312 ORTHO05D007843 1.1e-14 84.0 51 78.4
arahy.Tifrunner.gnm1.ann1.YWP2KZ Arachis hypogaea HOM05D006312 ORTHO05D007843 1.4e-14 83.6 51 78.4
Manes.02G117611 Manihot esculenta HOM05D006312 ORTHO05D007843 1.4e-14 83.6 51 82.4
Oeu024786.1 Olea europaea HOM05D006312 ORTHO05D007843 1.4e-14 83.6 51 78.4
THA.LOC104815359 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 1.4e-14 83.6 52 78.8
arahy.Tifrunner.gnm1.ann1.Y34PHS Arachis hypogaea HOM05D006312 ORTHO05D007843 1.9e-14 83.2 51 76.5
COL.COLO4_27421 Corchorus olitorius HOM05D006312 ORTHO05D007843 1.9e-14 83.2 51 76.5
Gohir.A13G006700 Gossypium hirsutum HOM05D006312 ORTHO05D007843 1.9e-14 83.2 51 72.5
TWI34G0319 Tripterygium wilfordii HOM05D006312 ORTHO05D007843 1.9e-14 83.2 84 56.0
Nn6g34643 Nelumbo nucifera HOM05D006312 ORTHO05D007843 2.5e-14 82.8 51 80.4
THA.LOC104808852 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 2.5e-14 82.8 52 75.0
VMungo1383G0261 Vigna mungo HOM05D006312 ORTHO05D007843 2.5e-14 82.8 76 56.6
EL10Ac2g02752 Beta vulgaris HOM05D006312 ORTHO05D007843 3.2e-14 82.4 50 76.0
QL06p053470 Quercus lobata HOM05D006312 ORTHO05D007843 3.2e-14 82.4 62 66.1
Rhsim08G0025300 Rhododendron simsii HOM05D006312 ORTHO05D007843 3.2e-14 82.4 156 39.1
Sabra16G0308500 Salix brachista HOM05D006312 ORTHO05D007843 3.2e-14 82.4 51 74.5
TPR.G19116 Trifolium pratense HOM05D006312 ORTHO05D007843 3.2e-14 82.4 52 75.0
HanXRQChr16g0532211 Helianthus annuus HOM05D006312 ORTHO05D007843 4.2e-14 82.0 49 81.6
Hma1.2p1_0034F.1_g021580 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 4.2e-14 82.0 52 75.0
Hma1.2p1_0034F.1_g021590 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 4.2e-14 82.0 52 75.0
Lsat_1_v5_gn_3_68340 Lactuca sativa HOM05D006312 ORTHO05D007843 4.2e-14 82.0 68 63.2
Dinv24398 Davidia involucrata HOM05D006312 ORTHO05D007843 5.5e-14 81.6 127 45.7
MBI04_g11525_MAGBIO Magnolia biondii HOM05D006312 ORTHO05D007843 5.5e-14 81.6 51 76.5
MD15G1226900 Malus domestica HOM05D006312 ORTHO05D007843 5.5e-14 81.6 51 76.5
Sed0011609 Sechium edule HOM05D006312 ORTHO05D007843 5.5e-14 81.6 51 74.5
ATR0605G230 Amborella trichopoda HOM05D006312 ORTHO05D007843 7.2e-14 81.3 52 73.1
Glyma.19G160500 Glycine max HOM05D006312 ORTHO05D007843 7.2e-14 81.3 68 61.8
Nitab4.5_0003141g0020 Nicotiana tabacum HOM05D006312 ORTHO05D007843 7.2e-14 81.3 68 61.8
Nitab4.5_0003878g0040 Nicotiana tabacum HOM05D006312 ORTHO05D007843 7.2e-14 81.3 68 61.8
Hund13396 Selenicereus undatus HOM05D006312 ORTHO05D007843 7.2e-14 81.3 50 76.0
vmacro18480 Vaccinium macrocarpon HOM05D006312 ORTHO05D007843 7.2e-14 81.3 51 80.4
AUR62037337 Chenopodium quinoa HOM05D006312 ORTHO05D007843 9.3e-14 80.9 52 73.1
Glyma.03G158200 Glycine max HOM05D006312 ORTHO05D007843 9.3e-14 80.9 50 78.0
Lj1g0018795 Lotus japonicus HOM05D006312 ORTHO05D007843 9.3e-14 80.9 76 53.9
SGA_v2.0_scaffold132G34566 Striga asiatica HOM05D006312 ORTHO05D007843 9.3e-14 80.9 50 74.0
TAR376G0343 Trochodendron aralioides HOM05D006312 ORTHO05D007843 9.3e-14 80.9 82 52.4
CsaV3_6G052950 Cucumis sativus L. HOM05D006312 ORTHO05D007843 1.2e-13 80.5 52 73.1
Potri.001G455900 Populus trichocarpa HOM05D006312 ORTHO05D007843 1.2e-13 80.5 51 72.5
RcHm_v2.0_Chr2g0096661 Rosa chinensis HOM05D006312 ORTHO05D007843 1.2e-13 80.5 51 72.5
SalBow5G1176 Salvia bowleyana HOM05D006312 ORTHO05D007843 1.2e-13 80.5 82 52.4
Thecc.05G202100 Theobroma cacao HOM05D006312 ORTHO05D007843 1.2e-13 80.5 51 72.5
Aqoxy6G03048 Aquilegia oxysepala HOM05D006312 ORTHO05D007843 1.6e-13 80.1 51 70.6
CANSAT21G2119 Cannabis sativa HOM05D006312 ORTHO05D007843 1.6e-13 80.1 51 74.5
MELO3C007014.2 Cucumis melo HOM05D006312 ORTHO05D007843 1.6e-13 80.1 51 74.5
DCAR_016700 Daucus carota HOM05D006312 ORTHO05D007843 1.6e-13 80.1 100 45.0
ECA246G0189 Erigeron canadensis HOM05D006312 ORTHO05D007843 1.6e-13 80.1 136 38.2
Prupe.7G188400 Prunus persica HOM05D006312 ORTHO05D007843 1.6e-13 80.1 50 76.0
Peaxi162Scf00981g00214 Petunia axillaris HOM05D006312 ORTHO05D007843 2.1e-13 79.7 61 65.6
Sc10g0004590 Simmondsia chinensis HOM05D006312 ORTHO05D007843 2.1e-13 79.7 51 70.6
Atru.chr2.1887 Acer truncatum HOM05D006312 ORTHO05D007843 2.7e-13 79.3 50 74.0
Ah.12g058670 Amaranthus hybridus HOM05D006312 ORTHO05D007843 2.7e-13 79.3 51 72.5
Cc07_g12330 Coffea canephora HOM05D006312 ORTHO05D007843 2.7e-13 79.3 51 72.5
FvH4_1g09790 Fragaria vesca HOM05D006312 ORTHO05D007843 2.7e-13 79.3 51 72.5
FAN19G0451 Fragaria x ananassa HOM05D006312 ORTHO05D007843 2.7e-13 79.3 51 72.5
FAN23G0139 Fragaria x ananassa HOM05D006312 ORTHO05D007843 2.7e-13 79.3 51 72.5
FAN23G0893 Fragaria x ananassa HOM05D006312 ORTHO05D007843 2.7e-13 79.3 51 72.5
FAN23G3058 Fragaria x ananassa HOM05D006312 ORTHO05D007843 2.7e-13 79.3 51 72.5
FAN26G2993 Fragaria x ananassa HOM05D006312 ORTHO05D007843 2.7e-13 79.3 51 72.5
FAN28G0218 Fragaria x ananassa HOM05D006312 ORTHO05D007843 2.7e-13 79.3 51 72.5
Potri.011G146200 Populus trichocarpa HOM05D006312 ORTHO05D007843 2.7e-13 79.3 51 72.5
Cpa.g.sc178.37 Carica papaya HOM05D006312 ORTHO05D007843 3.6e-13 79.0 50 70.0
Sopen02g017370 Solanum pennellii HOM05D006312 ORTHO05D007843 6.1e-13 78.2 48 77.1
GSVIVG01026613001 Vitis vinifera HOM05D006312 ORTHO05D007843 6.1e-13 78.2 50 72.0
CAN.G883.25 Capsicum annuum HOM05D006312 ORTHO05D007843 7.9e-13 77.8 48 77.1
Ciclev10012864m.g Citrus clementina HOM05D006312 ORTHO05D007843 7.9e-13 77.8 51 72.5
Phvul.001G155800 Phaseolus vulgaris HOM05D006312 ORTHO05D007843 7.9e-13 77.8 50 72.0
Solyc02g068270.4 Solanum lycopersicum HOM05D006312 ORTHO05D007843 7.9e-13 77.8 48 77.1
unitig_748.g7258 Utricularia gibba HOM05D006312 ORTHO05D007843 7.9e-13 77.8 79 53.2
PSO541G2566 Papaver somniferum HOM05D006312 ORTHO05D007843 1.0e-12 77.4 49 75.5
SEGI_12518 Sequoiadendron giganteum HOM05D006312 ORTHO05D007843 1.0e-12 77.4 52 69.2
BcaB01g00508 Brassica carinata HOM05D006312 ORTHO05D007843 1.4e-12 77.0 76 51.3
A09p44660 Brassica napus HOM05D006312 ORTHO05D007843 1.4e-12 77.0 76 51.3
C08p26760 Brassica napus HOM05D006312 ORTHO05D007843 1.4e-12 77.0 76 51.3
BolC8t50289H Brassica oleracea HOM05D006312 ORTHO05D007843 1.4e-12 77.0 76 51.3
BraA09t39926Z Brassica rapa HOM05D006312 ORTHO05D007843 1.4e-12 77.0 76 51.3
Lj2A507T48 Lonicera japonica HOM05D006312 ORTHO05D007843 1.4e-12 77.0 63 61.9
AT3G51510 Arabidopsis thaliana HOM05D006312 ORTHO05D007843 1.8e-12 76.6 52 71.2
CARHR161090 Cardamine hirsuta HOM05D006312 ORTHO05D007843 2.3e-12 76.3 76 52.6
Migut.K01209 Erythranthe guttata HOM05D006312 ORTHO05D007843 2.3e-12 76.3 67 58.2
PSO675G2564 Papaver somniferum HOM05D006312 ORTHO05D007843 2.3e-12 76.3 48 75.0
A01p23400 Brassica napus HOM05D006312 ORTHO05D007843 3.0e-12 75.9 76 50.0
C01p29030 Brassica napus HOM05D006312 ORTHO05D007843 3.0e-12 75.9 76 50.0
BolC1t02835H Brassica oleracea HOM05D006312 ORTHO05D007843 3.0e-12 75.9 76 50.0
BraA01t02247Z Brassica rapa HOM05D006312 ORTHO05D007843 3.0e-12 75.9 76 50.0
Carub.0005s1789 Capsella rubella HOM05D006312 ORTHO05D007843 3.0e-12 75.9 76 50.0
AL5G31950 Arabidopsis lyrata HOM05D006312 ORTHO05D007843 6.7e-12 74.7 52 67.3
MSTRG.3652 Avicennia marina HOM05D006312 ORTHO05D007843 6.7e-12 74.7 48 70.8
Thhalv10010756m.g Eutrema salsugineum HOM05D006312 ORTHO05D007843 6.7e-12 74.7 74 51.4
HPP92_005603 Vanilla planifolia HOM05D006312 ORTHO05D007843 6.7e-12 74.7 51 64.7
BcaNung00380 Brassica carinata HOM05D006312 ORTHO05D007843 8.8e-12 74.3 74 50.0
Sp5g10730 Schrenkiella parvula HOM05D006312 ORTHO05D007843 1.1e-11 73.9 76 48.7
Os05g0490900 Oryza sativa ssp. japonica HOM05D006312 ORTHO05D007843 3.3e-11 72.4 48 70.8
Zm00001eb291320 Zea mays HOM05D006312 ORTHO05D007843 1.7e-10 70.1 74 48.6
ClCG01G025710 Citrullus lanatus HOM05D006312 ORTHO05D007843 2.2e-10 69.7 75 49.3
AagrBONN_evm.TU.Sc2ySwM_117.3170 Anthoceros agrestis HOM05D006312 ORTHO05D007843 2.4e-09 66.2 50 60.0
CBR_g16852 Chara braunii HOM05D006312 ORTHO05D007843 1.5e-08 63.5 52 51.9
SMO356G0733 Selaginella moellendorffii HOM05D006312 ORTHO05D007843 4.5e-08 62.0 50 50.0
Mapoly0072s0008 Marchantia polymorpha HOM05D006312 ORTHO05D007843 8.5e-07 57.8 49 49.0
Pp3c12_25230 Physcomitrium patens HOM05D006312 ORTHO05D007843 1.1e-06 57.4 50 48.0
CSS0013138 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 7.2e-06 54.7 31 80.6


User provided reference genes

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