Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0018014 Camellia sinensis var. sinensis HOM05D003733 ORTHO05D004035 1.6e-47 192.6 106 100.0
CSS0014575 Camellia sinensis var. sinensis HOM05D003733 ORTHO05D004035 2.0e-34 149.1 84 98.8
CSS0008611 Camellia sinensis var. sinensis HOM05D003733 ORTHO05D004035 2.0e-26 122.5 83 83.1
CiPaw.12G004300 Carya illinoinensis HOM05D003733 ORTHO05D004035 1.3e-14 83.2 90 61.1
Actinidia11935 Actinidia chinensis HOM05D003733 ORTHO05D004035 2.5e-13 79.0 87 60.9
Actinidia36390 Actinidia chinensis HOM05D003733 ORTHO05D004035 5.6e-13 77.8 84 63.1
MSTRG.3501 Avicennia marina HOM05D003733 ORTHO05D004035 1.6e-12 76.3 77 59.7
Dinv26992 Davidia involucrata HOM05D003733 ORTHO05D004035 1.1e-11 73.6 83 57.8
SalBow7G4044 Salvia bowleyana HOM05D003733 ORTHO05D004035 4.0e-11 71.6 91 47.3
Rhsim10G0187300 Rhododendron simsii HOM05D006560 ORTHO05D008164 2.0e-10 69.3 89 55.1
GSVIVG01003708001 Vitis vinifera HOM05D003733 ORTHO05D004035 2.6e-10 68.9 87 54.0
SGA_v2.0_scaffold174G39242 Striga asiatica HOM05D003733 ORTHO05D004035 5.8e-10 67.8 76 60.5
Lsat_1_v5_gn_8_34760 Lactuca sativa HOM05D003733 ORTHO05D004035 9.9e-10 67.0 86 55.8
Cfa006814 Carpinus fangiana HOM05D003733 ORTHO05D004035 2.2e-09 65.9 93 51.6
Haze_03945 Corylus avellana HOM05D003733 ORTHO05D004035 2.2e-09 65.9 93 51.6
TAR381G0096 Trochodendron aralioides HOM05D003733 ORTHO05D004035 4.9e-09 64.7 78 57.7
ECA233G0477 Erigeron canadensis HOM05D003733 ORTHO05D004035 2.4e-08 62.4 84 54.8
unitig_0.g2606 Utricularia gibba HOM05D003733 ORTHO05D004035 5.4e-08 61.2 84 51.2
Sc16g0000790 Simmondsia chinensis HOM05D003733 ORTHO05D004035 7.1e-08 60.8 98 49.0
Cpa.g.sc129.28 Carica papaya HOM05D003733 ORTHO05D004035 2.1e-07 59.3 96 51.0
Phvul.002G139100 Phaseolus vulgaris HOM05D003733 ORTHO05D004035 2.1e-07 59.3 84 53.6
Lj4A174T33 Lonicera japonica HOM05D003733 ORTHO05D004035 3.5e-07 58.5 84 53.6
VMungo1215G3108 Vigna mungo HOM05D003733 ORTHO05D004035 6.0e-07 57.8 85 50.6
CiPaw.12G004100 Carya illinoinensis HOM05D003733 ORTHO05D004035 1.3e-06 56.6 90 46.7
vmacro07413 Vaccinium macrocarpon HOM05D003733 ORTHO05D004035 1.3e-06 56.6 83 53.0
TAR625G0952 Trochodendron aralioides HOM05D003733 ORTHO05D004035 3.9e-06 55.1 74 55.4
Ciclev10025536m.g Citrus clementina HOM05D003733 ORTHO05D004035 5.1e-06 54.7 83 51.8


User provided reference genes

Program Settings