Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017994 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 5.9e-43 177.2 92 100.0
CSS0018566 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 9.1e-36 153.3 90 91.1
TWI75G0424 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 6.3e-29 130.6 90 78.9
Potri.009G124700 Populus trichocarpa HOM05D007135 ORTHO05D008880 5.3e-28 127.5 92 73.9
FAN27G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 2.7e-27 125.2 89 70.8
Cfa005113 Carpinus fangiana HOM05D007135 ORTHO05D008880 4.5e-27 124.4 89 75.3
COL.COLO4_26047 Corchorus olitorius HOM05D007135 ORTHO05D008880 5.9e-27 124.0 89 71.9
PGR142G3962 Punica granatum HOM05D007135 ORTHO05D008880 7.7e-27 123.6 93 73.1
CANSAT11G0395 Cannabis sativa HOM05D007135 ORTHO05D008880 1.0e-26 123.2 99 64.6
FAN15G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 1.0e-26 123.2 89 68.5
RcHm_v2.0_Chr6g0267951 Rosa chinensis HOM05D007135 ORTHO05D008880 1.0e-26 123.2 93 68.8
Potri.004G163100 Populus trichocarpa HOM05D007135 ORTHO05D008880 1.3e-26 122.9 95 69.5
Solyc01g110400.2 Solanum lycopersicum HOM05D007135 ORTHO05D008880 1.3e-26 122.9 89 71.9
Sopen01g052550 Solanum pennellii HOM05D007135 ORTHO05D008880 1.3e-26 122.9 89 71.9
FvH4_2g10470 Fragaria vesca HOM05D007135 ORTHO05D008880 2.9e-26 121.7 89 68.5
FAN24G2677 Fragaria x ananassa HOM05D007135 ORTHO05D008880 2.9e-26 121.7 89 68.5
QL11p046458 Quercus lobata HOM05D007135 ORTHO05D008880 2.9e-26 121.7 92 70.7
Thecc.02G074900 Theobroma cacao HOM05D007135 ORTHO05D008880 2.9e-26 121.7 89 71.9
MD10G1062900 Malus domestica HOM05D007135 ORTHO05D008880 5.0e-26 120.9 100 64.0
Haze_02238 Corylus avellana HOM05D007135 ORTHO05D008880 1.5e-25 119.4 89 75.3
Cpa.g.sc150.16 Carica papaya HOM05D007135 ORTHO05D008880 3.2e-25 118.2 89 70.8
Manes.11G081700 Manihot esculenta HOM05D007135 ORTHO05D008880 3.2e-25 118.2 94 70.2
Prupe.8G083700 Prunus persica HOM05D007135 ORTHO05D008880 4.2e-25 117.9 98 63.3
MELO3C013419.2 Cucumis melo HOM05D007135 ORTHO05D008880 5.5e-25 117.5 89 69.7
Duzib132G0527 Durio zibethinus HOM05D007135 ORTHO05D008880 5.5e-25 117.5 89 70.8
Migut.B00173 Erythranthe guttata HOM05D007135 ORTHO05D008880 7.2e-25 117.1 94 66.0
DCAR_003685 Daucus carota HOM05D007135 ORTHO05D008880 9.4e-25 116.7 96 69.8
Rhsim05G0068200 Rhododendron simsii HOM05D007135 ORTHO05D008880 1.2e-24 116.3 77 77.9
Atru.chr5.3145 Acer truncatum HOM05D007135 ORTHO05D008880 1.6e-24 115.9 89 66.3
Duzib248G1605 Durio zibethinus HOM05D007135 ORTHO05D008880 1.6e-24 115.9 90 72.2
Manes.04G083200 Manihot esculenta HOM05D007135 ORTHO05D008880 2.7e-24 115.2 92 68.5
Gorai.005G250000 Gossypium raimondii HOM05D007135 ORTHO05D008880 4.7e-24 114.4 93 68.8
Aqoxy2G03368 Aquilegia oxysepala HOM05D007135 ORTHO05D008880 1.0e-23 113.2 96 65.6
Nn5g29239 Nelumbo nucifera HOM05D007135 ORTHO05D008880 1.0e-23 113.2 90 65.6
Sed0017056 Sechium edule HOM05D007135 ORTHO05D008880 1.4e-23 112.8 91 68.1
Ciclev10029699m.g Citrus clementina HOM05D007135 ORTHO05D008880 1.8e-23 112.5 88 69.3
Gohir.D02G222000 Gossypium hirsutum HOM05D007135 ORTHO05D008880 1.8e-23 112.5 93 67.7
Gorai.002G149200 Gossypium raimondii HOM05D007135 ORTHO05D008880 1.8e-23 112.5 93 67.7
SalBow6G3736 Salvia bowleyana HOM05D007135 ORTHO05D008880 3.0e-23 111.7 92 64.1
Cc02_g16900 Coffea canephora HOM05D007135 ORTHO05D008880 4.0e-23 111.3 101 63.4
Dinv26818 Davidia involucrata HOM05D000193 ORTHO05D000402 5.2e-23 110.9 77 79.2
MBI05_g16268_MAGBIO Magnolia biondii HOM05D007135 ORTHO05D008880 8.8e-23 110.2 90 64.4
ClCG02G004560 Citrullus lanatus HOM05D007135 ORTHO05D008880 1.5e-22 109.4 89 66.3
Gohir.A03G200700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 1.5e-22 109.4 89 65.2
CAN.G170.101 Capsicum annuum HOM05D007135 ORTHO05D008880 2.6e-22 108.6 87 65.5
Gohir.A13G090900 Gossypium hirsutum HOM05D007135 ORTHO05D008880 3.4e-22 108.2 93 64.5
Lalb_Chr23g0265121 Lupinus albus HOM05D007135 ORTHO05D008880 3.4e-22 108.2 89 65.2
Lalb_Chr23g0265141 Lupinus albus HOM05D007135 ORTHO05D008880 3.4e-22 108.2 89 65.2
AL4G10430 Arabidopsis lyrata HOM05D007135 ORTHO05D008880 4.4e-22 107.8 93 63.4
MD05G1055600 Malus domestica HOM05D007135 ORTHO05D008880 4.4e-22 107.8 100 59.0
PSO541G1924 Papaver somniferum HOM05D007135 ORTHO05D008880 5.7e-22 107.5 89 64.0
unitig_60.g25867 Utricularia gibba HOM05D007135 ORTHO05D008880 5.7e-22 107.5 83 66.3
PSO675G0190 Papaver somniferum HOM05D007135 ORTHO05D008880 9.8e-22 106.7 87 65.5
TWI79G1445 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 1.3e-21 106.3 77 74.0
Gohir.D13G096700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 1.7e-21 105.9 87 65.5
Thhalv10000391m.g Eutrema salsugineum HOM05D007135 ORTHO05D008880 2.8e-21 105.1 96 61.5
Aa31LG7G15200 Aethionema arabicum HOM05D007135 ORTHO05D008880 3.7e-21 104.8 95 64.2
CARHR112160 Cardamine hirsuta HOM05D007135 ORTHO05D008880 3.7e-21 104.8 96 62.5
EL10Ac9g21635 Beta vulgaris HOM05D007135 ORTHO05D008880 6.3e-21 104.0 92 59.8
Lj1g0005652 Lotus japonicus HOM05D007135 ORTHO05D008880 6.3e-21 104.0 82 67.1
Phvul.009G002700 Phaseolus vulgaris HOM05D007135 ORTHO05D008880 6.3e-21 104.0 89 64.0
ATR0149G014 Amborella trichopoda HOM05D007135 ORTHO05D008880 1.4e-20 102.8 92 58.7
BolC8t51729H Brassica oleracea HOM05D007135 ORTHO05D008880 1.4e-20 102.8 92 60.9
Psat5g003840 Pisum sativum HOM05D007135 ORTHO05D008880 1.4e-20 102.8 93 63.4
Sp4g00480 Schrenkiella parvula HOM05D007135 ORTHO05D008880 1.4e-20 102.8 96 61.5
AT2G21290 Arabidopsis thaliana HOM05D007135 ORTHO05D008880 1.8e-20 102.4 96 60.4
C08p41660 Brassica napus HOM05D007135 ORTHO05D008880 1.8e-20 102.4 96 61.5
Ca_15331_v3 Cicer arietinum L. HOM05D007135 ORTHO05D008880 1.8e-20 102.4 89 61.8
Actinidia02247 Actinidia chinensis HOM05D007135 ORTHO05D008880 2.4e-20 102.1 99 57.6
Carub.0004s0033 Capsella rubella HOM05D007135 ORTHO05D008880 3.1e-20 101.7 96 60.4
AUR62010386 Chenopodium quinoa HOM05D007135 ORTHO05D008880 3.1e-20 101.7 94 55.3
AUR62016832 Chenopodium quinoa HOM05D007135 ORTHO05D008880 3.1e-20 101.7 94 55.3
BraA09t41224Z Brassica rapa HOM05D007135 ORTHO05D008880 4.1e-20 101.3 96 61.5
Ah.01g018800 Amaranthus hybridus HOM05D007135 ORTHO05D008880 5.4e-20 100.9 88 61.4
Medtr3g117570 Medicago truncatula HOM05D007135 ORTHO05D008880 5.4e-20 100.9 86 61.6
Sc08g0000910 Simmondsia chinensis HOM05D007135 ORTHO05D008880 5.4e-20 100.9 95 56.8
TPR.G32169 Trifolium pratense HOM05D007135 ORTHO05D008880 7.0e-20 100.5 90 61.1
A04p16070 Brassica napus HOM05D007135 ORTHO05D008880 9.1e-20 100.1 97 57.7
BraA04t17247Z Brassica rapa HOM05D007135 ORTHO05D008880 9.1e-20 100.1 97 57.7
Nitab4.5_0005932g0010 Nicotiana tabacum HOM05D007135 ORTHO05D008880 9.1e-20 100.1 79 70.9
BcaC02g08801 Brassica carinata HOM05D007135 ORTHO05D008880 1.2e-19 99.8 95 58.9
A09p58330 Brassica napus HOM05D007135 ORTHO05D008880 1.2e-19 99.8 92 58.7
C04p50530 Brassica napus HOM05D007135 ORTHO05D008880 1.2e-19 99.8 95 58.9
BolC4t26651H Brassica oleracea HOM05D007135 ORTHO05D008880 1.2e-19 99.8 95 58.9
BcaB08g34980 Brassica carinata HOM05D007135 ORTHO05D008880 1.6e-19 99.4 89 64.0
vmacro17421 Vaccinium macrocarpon HOM05D007135 ORTHO05D008880 1.6e-19 99.4 76 69.7
Nitab4.5_0005266g0060 Nicotiana tabacum HOM05D007135 ORTHO05D008880 2.0e-19 99.0 85 65.9
Os09g0528100 Oryza sativa ssp. japonica HOM05D007135 ORTHO05D008880 2.0e-19 99.0 92 59.8
TAR381G0296 Trochodendron aralioides HOM05D007135 ORTHO05D008880 2.7e-19 98.6 79 69.6
GSVIVG01024170001 Vitis vinifera HOM05D007135 ORTHO05D008880 3.5e-19 98.2 74 70.3
SHI05613 Sapria himalayana HOM05D007135 ORTHO05D008880 1.0e-18 96.7 67 68.7
CiPaw.05G073400 Carya illinoinensis HOM05D007135 ORTHO05D008880 5.0e-18 94.4 76 68.4
BcaC07g41158 Brassica carinata HOM05D007135 ORTHO05D008880 6.5e-18 94.0 92 57.6
Sabra09G0095700 Salix brachista HOM05D007135 ORTHO05D008880 6.5e-18 94.0 77 67.5
Sabra04G0109400 Salix brachista HOM05D007135 ORTHO05D008880 1.9e-17 92.4 80 63.8
ECA234G2991 Erigeron canadensis HOM05D007135 ORTHO05D008880 2.5e-17 92.0 98 57.1
Lsat_1_v5_gn_4_67341 Lactuca sativa HOM05D007135 ORTHO05D008880 1.0e-15 86.7 82 61.0
Peaxi162Scf00016g00015 Petunia axillaris HOM05D007135 ORTHO05D008880 5.2e-15 84.3 48 85.4
HanXRQChr10g0294181 Helianthus annuus HOM05D007135 ORTHO05D008880 1.2e-14 83.2 82 57.3
CsaV3_7G000400 Cucumis sativus L. HOM05D007135 ORTHO05D008880 1.5e-14 82.8 74 62.2
Glyma.04G007900 Glycine max HOM05D007135 ORTHO05D008880 2.0e-14 82.4 81 56.8
THA.LOC104824791 Tarenaya hassleriana HOM05D007135 ORTHO05D008880 2.0e-14 82.4 84 57.1
FAN20G0703 Fragaria x ananassa HOM05D007135 ORTHO05D008880 4.4e-14 81.3 48 79.2
Glyma.06G007700 Glycine max HOM05D007135 ORTHO05D008880 4.4e-14 81.3 78 59.0
Haze_15927 Corylus avellana HOM05D018783 ORTHO05D008880 2.8e-13 78.6 57 70.2
Duzib052G0169 Durio zibethinus HOM05D007135 ORTHO05D008880 2.8e-13 78.6 74 62.2
HPP92_008881 Vanilla planifolia HOM05D007135 ORTHO05D008880 1.1e-12 76.6 41 82.9
Haze_08383 Corylus avellana HOM05D007135 ORTHO05D008880 1.4e-12 76.3 50 80.0
Zm00001eb103340 Zea mays HOM05D007135 ORTHO05D008880 2.0e-11 72.4 52 65.4
RhsimUnG0003900 Rhododendron simsii HOM05D004431 ORTHO05D005053 8.0e-08 60.5 43 74.4
RhsimUnG0067300 Rhododendron simsii HOM05D004431 ORTHO05D005053 8.0e-08 60.5 43 74.4
CsaV3_4G026180 Cucumis sativus L. HOM05D007113 ORTHO05D008859 2.0e-06 55.8 63 52.4
MELO3C003245.2 Cucumis melo HOM05D007113 ORTHO05D008859 2.6e-06 55.5 63 50.8
ClCG04G007070 Citrullus lanatus HOM05D007113 ORTHO05D008859 7.5e-06 53.9 66 51.5
Mapoly0090s0033 Marchantia polymorpha HOM05D007135 ORTHO05D008880 7.5e-06 53.9 73 45.2
Oeu028599.1 Olea europaea HOM05D007113 ORTHO05D008859 9.8e-06 53.5 67 46.3


User provided reference genes

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