Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017983 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 8.1e-108 393.7 186 100.0
CSS0003990 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 2.4e-104 382.1 186 97.3
Dinv13326 Davidia involucrata HOM05D000230 ORTHO05D000176 1.8e-43 179.9 173 59.0
Actinidia35170 Actinidia chinensis HOM05D008142 ORTHO05D009674 3.5e-42 175.6 182 57.1
CSS0032813 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 3.6e-39 165.6 192 52.1
Actinidia18850 Actinidia chinensis HOM05D008142 ORTHO05D009674 5.2e-38 161.8 166 57.2
RhsimUnG0205300 Rhododendron simsii HOM05D008142 ORTHO05D009674 1.2e-37 160.6 182 51.6
RhsimUnG0205200 Rhododendron simsii HOM05D008142 ORTHO05D009674 3.3e-37 159.1 184 52.7
Dinv26679 Davidia involucrata HOM05D008142 ORTHO05D009674 1.1e-35 154.1 146 61.0
Hma1.2p1_0280F.1_g112890 Hydrangea macrophylla HOM05D008142 ORTHO05D009674 8.5e-33 144.4 190 49.5
Nn4g26546 Nelumbo nucifera HOM05D008142 ORTHO05D009674 2.2e-28 129.8 177 43.5
Nn3g20734 Nelumbo nucifera HOM05D008142 ORTHO05D009674 2.8e-28 129.4 190 46.3
Cfa019469 Carpinus fangiana HOM05D008142 ORTHO05D009674 3.5e-26 122.5 185 42.2
Oeu001311.1 Olea europaea HOM05D008142 ORTHO05D009674 1.0e-25 120.9 182 45.6
Oeu020029.1 Olea europaea HOM05D008142 ORTHO05D009674 8.6e-25 117.9 183 45.9
Haze_08481 Corylus avellana HOM05D008142 ORTHO05D009674 2.5e-24 116.3 185 41.6
QL04p069987 Quercus lobata HOM05D008142 ORTHO05D009674 5.5e-24 115.2 182 45.1
Eucgr.F03213 Eucalyptus grandis HOM05D008142 ORTHO05D009674 3.4e-21 105.9 188 40.4
Thecc.07G144200 Theobroma cacao HOM05D008142 ORTHO05D009674 7.5e-21 104.8 174 36.8
TAR629G2490 Trochodendron aralioides HOM05D008142 ORTHO05D009674 2.4e-19 99.8 171 43.3
COL.COLO4_17432 Corchorus olitorius HOM05D008142 ORTHO05D009674 7.0e-19 98.2 172 36.6
Lsat_1_v5_gn_7_100541 Lactuca sativa HOM05D008142 ORTHO05D009674 1.2e-18 97.4 177 42.4
ECA236G2480 Erigeron canadensis HOM05D002418 ORTHO05D002572 1.6e-18 97.1 182 39.0
QL04p069966 Quercus lobata HOM05D008142 ORTHO05D009674 2.0e-18 96.7 166 41.6
TAR627G0365 Trochodendron aralioides HOM05D008142 ORTHO05D009674 3.5e-18 95.9 181 41.4
MSTRG.15018 Avicennia marina HOM05D008142 ORTHO05D009674 4.5e-18 95.5 181 37.6
Nitab4.5_0004038g0010 Nicotiana tabacum HOM05D011950 ORTHO05D009674 5.9e-18 95.1 193 39.4
Thecc.07G144400 Theobroma cacao HOM05D008142 ORTHO05D009674 5.9e-18 95.1 178 37.1
Nitab4.5_0020402g0010 Nicotiana tabacum HOM05D011950 ORTHO05D009674 1.3e-17 94.0 193 39.4
RcHm_v2.0_Chr5g0028181 Rosa chinensis HOM05D008142 ORTHO05D009674 1.1e-16 90.9 174 36.2
Gorai.002G040600 Gossypium raimondii HOM05D008142 ORTHO05D009674 2.5e-16 89.7 174 32.8
Potri.001G379300 Populus trichocarpa HOM05D015893 ORTHO05D009674 2.5e-16 89.7 194 41.8
Nitab4.5_0007142g0040 Nicotiana tabacum HOM05D011950 ORTHO05D009674 4.3e-16 89.0 173 39.9
Gohir.A01G043100 Gossypium hirsutum HOM05D008142 ORTHO05D009674 5.6e-16 88.6 174 33.9
Gohir.D01G033500 Gossypium hirsutum HOM05D008142 ORTHO05D009674 7.3e-16 88.2 174 32.8
Gohir.D01G033700 Gossypium hirsutum HOM05D008142 ORTHO05D009674 7.3e-16 88.2 174 33.9
Gohir.A01G043000 Gossypium hirsutum HOM05D008142 ORTHO05D009674 9.5e-16 87.8 174 31.6
Prupe.4G151500 Prunus persica HOM05D015893 ORTHO05D019166 1.2e-15 87.4 191 36.1
Gohir.A01G042900 Gossypium hirsutum HOM05D008142 ORTHO05D009674 1.6e-15 87.0 174 32.8
FAN21G3515 Fragaria x ananassa HOM05D008142 ORTHO05D009674 2.1e-15 86.7 186 35.5
Gohir.D01G033600 Gossypium hirsutum HOM05D008142 ORTHO05D009674 2.1e-15 86.7 177 32.2
Gorai.002G040500 Gossypium raimondii HOM05D008142 ORTHO05D009674 2.8e-15 86.3 174 32.2
Prupe.4G151600 Prunus persica HOM05D008142 ORTHO05D009674 4.7e-15 85.5 195 39.5
Gorai.002G040900 Gossypium raimondii HOM05D008142 ORTHO05D009674 8.0e-15 84.7 176 31.2
PGSC0003DMG400007050 Solanum tuberosum HOM05D011950 ORTHO05D009674 1.0e-14 84.3 189 36.0
Potri.001G379400 Populus trichocarpa HOM05D008142 ORTHO05D009674 2.3e-14 83.2 176 40.3
Migut.M00615 Erythranthe guttata HOM05D019704 ORTHO05D009674 3.1e-14 82.8 156 37.8
Gohir.D01G033400 Gossypium hirsutum HOM05D008142 ORTHO05D009674 3.1e-14 82.8 177 32.2
Peaxi162Scf00000g00523 Petunia axillaris HOM05D011950 ORTHO05D009674 3.1e-14 82.8 181 38.1
FvH4_3g16940 Fragaria vesca HOM05D008142 ORTHO05D009674 4.0e-14 82.4 173 35.3
FAN11G1471 Fragaria x ananassa HOM05D008142 ORTHO05D009674 4.0e-14 82.4 173 35.3
Gohir.A01G042800 Gossypium hirsutum HOM05D008142 ORTHO05D009674 4.0e-14 82.4 177 31.6
Gohir.A01G043200 Gossypium hirsutum HOM05D008142 ORTHO05D009674 4.0e-14 82.4 176 30.1
Gorai.002G040800 Gossypium raimondii HOM05D008142 ORTHO05D009674 4.0e-14 82.4 174 32.8
Nitab4.5_0000639g0100 Nicotiana tabacum HOM05D011950 ORTHO05D009674 5.2e-14 82.0 131 45.8
Gorai.002G040700 Gossypium raimondii HOM05D008142 ORTHO05D009674 1.2e-13 80.9 177 30.5
DCAR_021049 Daucus carota HOM05D008142 ORTHO05D009674 1.5e-13 80.5 197 37.1
FAN16G2943 Fragaria x ananassa HOM05D008142 ORTHO05D009674 1.5e-13 80.5 173 34.7
Aqoxy1G01717 Aquilegia oxysepala HOM05D008142 ORTHO05D009674 5.8e-13 78.6 196 34.7
MSTRG.6725 Avicennia marina HOM05D008142 ORTHO05D009674 2.2e-12 76.6 184 37.0
PGSC0003DMG400008560 Solanum tuberosum HOM05D011950 ORTHO05D009674 2.2e-12 76.6 175 37.1
MBI07_g26359_MAGBIO Magnolia biondii HOM05D008142 ORTHO05D009674 2.9e-12 76.3 178 38.8
Sopen07g030160 Solanum pennellii HOM05D011950 ORTHO05D009674 2.9e-12 76.3 190 35.8
Solyc07g061890.1 Solanum lycopersicum HOM05D011950 ORTHO05D009674 4.9e-12 75.5 189 36.5
Aqoxy1G01721 Aquilegia oxysepala HOM05D008142 ORTHO05D009674 3.2e-11 72.8 191 30.9
Thecc.07G144300 Theobroma cacao HOM05D023069 ORTHO05D009674 4.1e-11 72.4 159 39.0
MBI10_g02220_MAGBIO Magnolia biondii HOM05D008142 ORTHO05D009674 5.4e-11 72.0 156 38.5
Ciclev10022628m.g Citrus clementina HOM05D008142 ORTHO05D009674 9.2e-11 71.2 178 32.6
Nitab4.5_0004038g0030 Nicotiana tabacum HOM05D026636 ORTHO05D022967 1.6e-10 70.5 179 36.3
TAR626G0317 Trochodendron aralioides HOM05D008142 ORTHO05D009674 2.0e-10 70.1 182 33.5
Cc05_g10420 Coffea canephora HOM05D011950 ORTHO05D009674 4.6e-10 68.9 181 33.1
Sabra16G0249900 Salix brachista HOM05D008142 ORTHO05D009674 4.6e-10 68.9 176 33.5
Sopen12g006760 Solanum pennellii HOM05D011950 ORTHO05D009674 4.6e-10 68.9 169 38.5
PGSC0003DMG401021252 Solanum tuberosum HOM05D011950 ORTHO05D009674 6.0e-10 68.6 178 33.7
MD03G1255500 Malus domestica HOM05D008142 ORTHO05D009674 7.8e-10 68.2 196 35.2
FvH4_3g16930 Fragaria vesca HOM05D015893 ORTHO05D019166 1.0e-09 67.8 185 32.4
FAN11G0710 Fragaria x ananassa HOM05D015893 ORTHO05D019166 1.0e-09 67.8 185 32.4
FAN16G3477 Fragaria x ananassa HOM05D015893 ORTHO05D019166 1.0e-09 67.8 185 32.4
FAN21G1907 Fragaria x ananassa HOM05D015893 ORTHO05D019166 1.0e-09 67.8 185 32.4
Lj3g0014819 Lotus japonicus HOM05D012055 ORTHO05D014183 2.3e-09 66.6 143 39.2
Lalb_Chr25g0285461 Lupinus albus HOM05D012055 ORTHO05D014183 3.0e-09 66.2 153 31.4
DCAR_013786 Daucus carota HOM05D019704 ORTHO05D009674 5.0e-09 65.5 185 34.6
COL.COLO4_17430 Corchorus olitorius HOM05D008142 ORTHO05D009674 6.6e-09 65.1 157 33.1
RcHm_v2.0_Chr5g0028161 Rosa chinensis HOM05D015893 ORTHO05D019166 8.6e-09 64.7 181 31.5
MD03G1255600 Malus domestica HOM05D015893 ORTHO05D019166 1.9e-08 63.5 190 34.7
Nitab4.5_0020402g0020 Nicotiana tabacum HOM05D026636 ORTHO05D022967 7.3e-08 61.6 124 39.5
TPR.G26609 Trifolium pratense HOM05D010689 ORTHO05D012855 9.5e-08 61.2 148 32.4
Peaxi162Scf00111g01113 Petunia axillaris HOM05D026636 ORTHO05D022967 1.2e-07 60.8 149 34.2
DCAR_017570 Daucus carota HOM05D019704 ORTHO05D009674 2.1e-07 60.1 162 37.0
MD11G1276300 Malus domestica HOM05D015893 ORTHO05D019166 1.1e-06 57.8 197 32.5
Peaxi162Scf00111g01112 Petunia axillaris HOM05D011950 ORTHO05D009674 1.1e-06 57.8 136 36.8
Sabra16G0249800 Salix brachista HOM05D008142 ORTHO05D009674 1.4e-06 57.4 162 36.4
Glyma.15G248000 Glycine max HOM05D012055 ORTHO05D014183 1.8e-06 57.0 170 32.9
Actinidia11208 Actinidia chinensis HOM05D050066 ORTHO05D012532 2.3e-06 56.6 163 28.2
Oeu020030.1 Olea europaea HOM05D008142 ORTHO05D009674 3.1e-06 56.2 176 33.5
DCAR_017571 Daucus carota HOM05D019704 ORTHO05D009674 4.0e-06 55.8 159 36.5
DCAR_025853 Daucus carota HOM05D019704 ORTHO05D009674 4.0e-06 55.8 159 36.5
Phvul.005G061600 Phaseolus vulgaris HOM05D012055 ORTHO05D014183 4.0e-06 55.8 141 32.6
VMungo1080G1331 Vigna mungo HOM05D012055 ORTHO05D014183 5.2e-06 55.5 139 33.8
Cpa.g.sc714.2 Carica papaya HOM05D008142 ORTHO05D009674 6.8e-06 55.1 137 37.2


User provided reference genes

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