Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017977 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 7.6e-34 146.4 63 100.0
CSS0008176 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 8.1e-28 126.3 54 98.1
CSS0029440 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 8.1e-28 126.3 54 98.1
CSS0041206 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 8.1e-28 126.3 54 98.1
CSS0048347 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 2.4e-27 124.8 54 96.3
CSS0034492 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 5.3e-27 123.6 54 96.3
CSS0045597 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 1.2e-26 122.5 54 94.4
CSS0015566 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 3.4e-26 120.9 59 86.4
CSS0024264 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 1.2e-23 112.5 54 87.0
Dinv16998 Davidia involucrata HOM05D002515 ORTHO05D002722 8.2e-20 99.8 54 70.4
Dinv43153 Davidia involucrata HOM05D002515 ORTHO05D002722 8.2e-20 99.8 54 70.4
Actinidia07036 Actinidia chinensis HOM05D002515 ORTHO05D002722 1.5e-18 95.5 55 72.7
Actinidia37204 Actinidia chinensis HOM05D002515 ORTHO05D002722 9.3e-16 86.3 54 64.8
CSS0025806 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 2.1e-15 85.1 55 63.6
CSS0020060 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 6.1e-15 83.6 54 64.8
CSS0030774 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 6.1e-15 83.6 54 64.8
CSS0044145 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 2.3e-14 81.6 54 61.1
vmacro03074 Vaccinium macrocarpon HOM05D002515 ORTHO05D002722 1.9e-13 78.6 54 57.4
Rhsim13G0082900 Rhododendron simsii HOM05D002515 ORTHO05D002722 7.4e-13 76.6 54 55.6
Oeu019195.1 Olea europaea HOM05D006354 ORTHO05D007773 9.7e-13 76.3 54 51.9
GSVIVG01024972001 Vitis vinifera HOM05D002515 ORTHO05D002722 2.4e-11 71.6 54 55.6
Actinidia13143 Actinidia chinensis HOM05D002515 ORTHO05D002722 5.3e-11 70.5 52 55.8
Migut.D02105 Erythranthe guttata HOM05D002515 ORTHO05D002722 2.6e-10 68.2 48 50.0
TAR633G1102 Trochodendron aralioides HOM05D002515 ORTHO05D002722 4.5e-10 67.4 54 53.7
Cfa011498 Carpinus fangiana HOM05D002515 ORTHO05D006653 1.0e-09 66.2 56 50.0
HanXRQChr04g0105731 Helianthus annuus HOM05D002515 ORTHO05D002722 1.7e-09 65.5 49 55.1
Actinidia05311 Actinidia chinensis HOM05D002515 ORTHO05D002722 2.9e-09 64.7 52 55.8
TAR636G0721 Trochodendron aralioides HOM05D002515 ORTHO05D002722 3.8e-09 64.3 52 51.9
Haze_24092 Corylus avellana HOM05D002515 ORTHO05D002722 5.0e-09 63.9 56 48.2
Oeu054145.1 Olea europaea HOM05D002515 ORTHO05D002722 5.0e-09 63.9 68 42.6
DCAR_005973 Daucus carota HOM05D002515 ORTHO05D002722 1.9e-08 62.0 54 46.3
Lsat_1_v5_gn_9_23360 Lactuca sativa HOM05D002515 ORTHO05D002722 1.9e-08 62.0 48 50.0
QL01p032098 Quercus lobata HOM05D002515 ORTHO05D002722 2.5e-08 61.6 49 55.1
TAR636G1413 Trochodendron aralioides HOM05D002515 ORTHO05D002722 2.5e-08 61.6 52 50.0
Dinv35606 Davidia involucrata HOM05D002515 ORTHO05D002722 3.2e-08 61.2 52 51.9
CANSAT54G1460 Cannabis sativa HOM05D002515 ORTHO05D002722 4.2e-08 60.8 56 48.2
Thecc.09G300700 Theobroma cacao HOM05D002515 ORTHO05D002722 7.2e-08 60.1 54 48.1
MELO3C025918.2 Cucumis melo HOM05D002515 ORTHO05D002722 1.2e-07 59.3 48 50.0
MD04G1128800 Malus domestica HOM05D002515 ORTHO05D002722 1.2e-07 59.3 53 50.9
MD11G1109700 Malus domestica HOM05D002515 ORTHO05D002722 1.2e-07 59.3 54 50.0
CsaV3_6G016870 Cucumis sativus L. HOM05D002515 ORTHO05D002722 1.6e-07 58.9 48 50.0
Prupe.6G078200 Prunus persica HOM05D002515 ORTHO05D002722 1.6e-07 58.9 54 48.1
PGR119G0741 Punica granatum HOM05D002515 ORTHO05D002722 1.6e-07 58.9 49 53.1
Duzib168G0968 Durio zibethinus HOM05D002515 ORTHO05D002722 2.1e-07 58.5 54 44.4
Rhsim04G0156800 Rhododendron simsii HOM05D002515 ORTHO05D002722 2.1e-07 58.5 52 44.2
Rhsim04G0157000 Rhododendron simsii HOM05D002515 ORTHO05D002722 2.1e-07 58.5 52 44.2
Cpa.g.sc81.155 Carica papaya HOM05D002515 ORTHO05D002722 2.7e-07 58.2 49 51.0
Lsat_1_v5_gn_8_73101 Lactuca sativa HOM05D002515 ORTHO05D002722 2.7e-07 58.2 46 54.3
ClCG04G004860 Citrullus lanatus HOM05D002515 ORTHO05D002722 3.6e-07 57.8 48 47.9
ECA247G2589 Erigeron canadensis HOM05D002515 ORTHO05D002722 4.6e-07 57.4 47 48.9
SalBow3G0449 Salvia bowleyana HOM05D002515 ORTHO05D002722 4.6e-07 57.4 52 46.2
ClCG02G020160 Citrullus lanatus HOM05D002515 ORTHO05D002722 6.1e-07 57.0 48 47.9
Gohir.D05G096000 Gossypium hirsutum HOM05D002515 ORTHO05D002722 1.0e-06 56.2 54 42.6
Gorai.009G099300 Gossypium raimondii HOM05D002515 ORTHO05D002722 1.0e-06 56.2 54 42.6
Potri.016G095500 Populus trichocarpa HOM05D002515 ORTHO05D002722 1.4e-06 55.8 54 46.3
PGR004G0883 Punica granatum HOM05D002515 ORTHO05D002722 1.4e-06 55.8 52 46.2
Duzib093G1384 Durio zibethinus HOM05D002515 ORTHO05D002722 2.3e-06 55.1 49 46.9
CiPaw.13G094800 Carya illinoinensis HOM05D002515 ORTHO05D002722 3.0e-06 54.7 49 44.9
COL.COLO4_18507 Corchorus olitorius HOM05D002515 ORTHO05D002722 3.0e-06 54.7 52 46.2
Nitab4.5_0004156g0040 Nicotiana tabacum HOM05D002515 ORTHO05D002722 3.9e-06 54.3 40 52.5
Manes.04G034800 Manihot esculenta HOM05D002515 ORTHO05D002722 5.1e-06 53.9 52 42.3
Prupe.6G254700 Prunus persica HOM05D002515 ORTHO05D002722 5.1e-06 53.9 53 49.1
Lj3g0026583 Lotus japonicus HOM05D002515 ORTHO05D002722 6.7e-06 53.5 52 48.1
PGSC0003DMG400030320 Solanum tuberosum HOM05D002515 ORTHO05D002722 8.8e-06 53.1 54 37.0


User provided reference genes

Program Settings