Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017974 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D007418 0.0e+00 2244.5 1129 100.0
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 0.0e+00 1442.9 1153 66.5
Hma1.2p1_2469F.1_g322680 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 0.0e+00 1263.8 1154 60.1
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 0.0e+00 1188.3 1142 58.9
Hma1.2p1_2165F.1_g315780 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 0.0e+00 1077.8 895 63.4
TAR622G0946 Trochodendron aralioides HOM05D000922 ORTHO05D007418 4.9e-309 1064.7 1173 54.1
Lj9A446G57 Lonicera japonica HOM05D000922 ORTHO05D007418 6.5e-301 1037.7 1154 53.0
CiPaw.11G024700 Carya illinoinensis HOM05D000922 ORTHO05D007418 2.6e-294 1015.8 1199 51.2
GSVIVG01007724001 Vitis vinifera HOM05D000922 ORTHO05D007418 2.6e-294 1015.8 1143 51.7
Cfa019149 Carpinus fangiana HOM05D000922 ORTHO05D007418 5.5e-292 1008.1 1202 50.7
Haze_07516 Corylus avellana HOM05D000922 ORTHO05D007418 8.8e-290 1000.7 1222 50.2
Atru.chr9.2494 Acer truncatum HOM05D000922 ORTHO05D007418 8.2e-288 994.2 1200 50.3
Nn4g22714 Nelumbo nucifera HOM05D000922 ORTHO05D007418 1.5e-286 989.9 1212 48.4
DCAR_016480 Daucus carota HOM05D000922 ORTHO05D007418 2.9e-285 985.7 1129 50.8
Dinv38573 Davidia involucrata HOM05D000922 ORTHO05D007418 2.6e-281 972.6 798 65.2
QL10p011002 Quercus lobata HOM05D000922 ORTHO05D007418 1.4e-279 966.8 1160 49.7
MD06G1172500 Malus domestica HOM05D000922 ORTHO05D007418 5.3e-279 964.9 1203 49.7
FvH4_5g05470 Fragaria vesca HOM05D000922 ORTHO05D007418 2.9e-277 959.1 1182 49.5
Manes.14G064400 Manihot esculenta HOM05D000922 ORTHO05D007418 3.2e-276 955.7 1185 48.4
RcHm_v2.0_Chr7g0193371 Rosa chinensis HOM05D000922 ORTHO05D007418 1.6e-275 953.4 1181 49.4
Prupe.5G171800 Prunus persica HOM05D000922 ORTHO05D007418 2.3e-274 949.5 1179 49.8
FAN18G1332 Fragaria x ananassa HOM05D000922 ORTHO05D007418 4.0e-274 948.7 1184 49.3
MD14G1178400 Malus domestica HOM05D000922 ORTHO05D007418 1.5e-273 946.8 1198 48.7
Potri.012G082500 Populus trichocarpa HOM05D000922 ORTHO05D007418 5.7e-273 944.9 1179 48.4
FAN08G1289 Fragaria x ananassa HOM05D000922 ORTHO05D007418 3.7e-272 942.2 1202 48.5
Thecc.03G014400 Theobroma cacao HOM05D000922 ORTHO05D007418 4.8e-272 941.8 1160 48.6
CANSAT80G2096 Cannabis sativa HOM05D000922 ORTHO05D007418 2.0e-270 936.4 1177 47.8
TWI23G1000 Tripterygium wilfordii HOM05D000922 ORTHO05D007418 1.3e-269 933.7 1159 48.0
vmacro19399 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 2.9e-269 932.6 558 80.1
Actinidia19330 Actinidia chinensis HOM05D000922 ORTHO05D007418 2.5e-268 929.5 907 58.3
Potri.015G078300 Populus trichocarpa HOM05D000922 ORTHO05D007418 3.2e-268 929.1 1185 48.2
Ciclev10018588m.g Citrus clementina HOM05D000922 ORTHO05D007418 6.1e-267 924.9 1231 47.1
Duzib205G1607 Durio zibethinus HOM05D000922 ORTHO05D007418 1.8e-266 923.3 1121 49.6
FAN13G2825 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.2e-265 920.6 1245 47.3
Gorai.008G296200 Gossypium raimondii HOM05D000922 ORTHO05D007418 9.8e-265 917.5 1148 48.5
Sabra15G0102900 Salix brachista HOM05D000922 ORTHO05D007418 3.1e-263 912.5 1186 46.7
FAN18G2587 Fragaria x ananassa HOM05D000922 ORTHO05D007418 3.5e-262 909.1 1268 46.1
Gohir.D12G275700 Gossypium hirsutum HOM05D000922 ORTHO05D007418 1.0e-261 907.5 1153 47.8
Sabra12G0059200 Salix brachista HOM05D000922 ORTHO05D007418 1.1e-260 904.0 1161 46.5
FAN04G3074 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.2e-259 900.6 968 53.0
Duzib068G1349 Durio zibethinus HOM05D000922 ORTHO05D007418 2.6e-257 892.9 1162 47.3
Peaxi162Scf00255g01019 Petunia axillaris HOM05D000922 ORTHO05D007418 1.6e-254 883.6 1191 47.0
Sc04g0001750 Simmondsia chinensis HOM05D000922 ORTHO05D007418 7.3e-252 874.8 1163 47.7
Lsat_1_v5_gn_5_15041 Lactuca sativa HOM05D000922 ORTHO05D007418 9.5e-252 874.4 1142 46.4
PGR083G1532 Punica granatum HOM05D000922 ORTHO05D007418 2.0e-249 866.7 1170 46.2
Nitab4.5_0001514g0050 Nicotiana tabacum HOM05D000922 ORTHO05D007418 1.7e-248 863.6 1169 46.4
Cc04_g12110 Coffea canephora HOM05D000922 ORTHO05D007418 5.4e-247 858.6 1134 46.3
Aqoxy3G02884 Aquilegia oxysepala HOM05D000922 ORTHO05D007418 1.2e-246 857.4 1150 45.6
PSO478G1387 Papaver somniferum HOM05D000922 ORTHO05D007418 1.3e-245 854.0 1174 45.4
Eucgr.B00297 Eucalyptus grandis HOM05D000922 ORTHO05D007418 8.6e-245 851.3 1201 45.1
PSO017G6576 Papaver somniferum HOM05D000922 ORTHO05D007418 4.7e-243 845.5 1174 45.1
ClCG06G017060 Citrullus lanatus HOM05D000922 ORTHO05D007418 4.0e-242 842.4 1189 44.7
MSTRG.23139 Avicennia marina HOM05D000922 ORTHO05D007418 1.1e-239 834.3 1161 45.2
HanXRQChr05g0155771 Helianthus annuus HOM05D000922 ORTHO05D007418 2.0e-238 830.1 1145 45.1
Oeu016401.1 Olea europaea HOM05D000922 ORTHO05D007418 3.0e-237 826.2 1039 48.3
Peaxi162Scf00089g01840 Petunia axillaris HOM05D000922 ORTHO05D007418 2.8e-235 819.7 885 50.7
arahy.Tifrunner.gnm1.ann1.9TFG5W Arachis hypogaea HOM05D000922 ORTHO05D007418 6.8e-234 815.1 1147 45.0
Ca_16166_v3 Cicer arietinum L. HOM05D000922 ORTHO05D007418 1.5e-233 813.9 1137 44.9
Hund02754 Selenicereus undatus HOM05D000922 ORTHO05D007418 5.8e-233 812.0 1167 45.9
Glyma.04G184600 Glycine max HOM05D000922 ORTHO05D007418 7.5e-233 811.6 1182 43.6
arahy.Tifrunner.gnm1.ann1.F0ZNJX Arachis hypogaea HOM05D000922 ORTHO05D007418 2.2e-232 810.1 1147 44.5
Sed0021678 Sechium edule HOM05D000922 ORTHO05D007418 2.4e-231 806.6 1186 44.2
Sopen03g031910 Solanum pennellii HOM05D000922 ORTHO05D007418 9.2e-231 804.7 989 47.0
Glyma.06G181100 Glycine max HOM05D000922 ORTHO05D007418 2.1e-230 803.5 1125 44.7
EL10Ac5g10730 Beta vulgaris HOM05D000922 ORTHO05D007418 3.9e-229 799.3 1145 44.6
AUR62030946 Chenopodium quinoa HOM05D000922 ORTHO05D007418 2.5e-228 796.6 1163 43.9
CAN.G1166.3 Capsicum annuum HOM05D000922 ORTHO05D007418 5.6e-228 795.4 890 49.8
TPR.G20687 Trifolium pratense HOM05D000922 ORTHO05D007418 1.1e-226 791.2 1141 44.2
VMungo1309G1607 Vigna mungo HOM05D000922 ORTHO05D007418 1.4e-226 790.8 1138 44.2
Phvul.009G177300 Phaseolus vulgaris HOM05D000922 ORTHO05D007418 3.1e-226 789.6 1158 44.0
AUR62008194 Chenopodium quinoa HOM05D000922 ORTHO05D007418 2.9e-224 783.1 1163 44.4
Psat0ss3962g0400 Pisum sativum HOM05D000922 ORTHO05D007418 4.1e-223 779.2 1128 44.6
Medtr3g077620 Medicago truncatula HOM05D000922 ORTHO05D007418 9.2e-223 778.1 896 49.8
Migut.O00098 Erythranthe guttata HOM05D000922 ORTHO05D007418 1.2e-222 777.7 1144 43.7
Lj1g0015886 Lotus japonicus HOM05D000922 ORTHO05D007418 2.1e-222 776.9 1153 43.7
SalBow5G3118 Salvia bowleyana HOM05D000922 ORTHO05D007418 2.3e-221 773.5 1046 45.7
MELO3C017091.2 Cucumis melo HOM05D000922 ORTHO05D007418 5.1e-221 772.3 1204 42.8
SGA_v2.0_scaffold90G27900 Striga asiatica HOM05D000922 ORTHO05D007418 2.8e-219 766.5 1128 43.0
BcaB05g22925 Brassica carinata HOM05D000922 ORTHO05D007418 3.1e-218 763.1 1108 43.1
Ah.02g110580 Amaranthus hybridus HOM05D000922 ORTHO05D007418 9.9e-217 758.1 1177 42.1
SalBow5G1735 Salvia bowleyana HOM05D000922 ORTHO05D007418 2.9e-216 756.5 1046 45.4
Sp5g13830 Schrenkiella parvula HOM05D000922 ORTHO05D007418 4.9e-216 755.7 1157 42.3
Thhalv10010097m.g Eutrema salsugineum HOM05D000922 ORTHO05D007418 8.4e-216 755.0 1115 43.5
AL5G27540 Arabidopsis lyrata HOM05D000922 ORTHO05D007418 3.0e-213 746.5 1158 43.4
Carub.0005s1432 Capsella rubella HOM05D000922 ORTHO05D007418 5.6e-212 742.3 1163 42.2
CARHR156940 Cardamine hirsuta HOM05D000922 ORTHO05D007418 1.8e-210 737.3 1134 42.5
Lalb_Chr23g0273281 Lupinus albus HOM05D000922 ORTHO05D007418 4.0e-210 736.1 559 64.9
Actinidia33077 Actinidia chinensis HOM05D000922 ORTHO05D007418 2.9e-208 729.9 511 72.2
Aa31LG4G16800 Aethionema arabicum HOM05D000922 ORTHO05D007418 2.9e-208 729.9 1143 42.2
Solyc03g112830.4 Solanum lycopersicum HOM05D000922 ORTHO05D007418 3.2e-207 726.5 992 43.8
Gohir.A12G275000 Gossypium hirsutum HOM05D000922 ORTHO05D007418 2.1e-206 723.8 983 46.3
BcaC09g49852 Brassica carinata HOM05D000922 ORTHO05D007418 7.9e-206 721.8 1112 42.0
BolC1t03155H Brassica oleracea HOM05D000922 ORTHO05D007418 7.9e-206 721.8 1113 42.0
AT3G48195 Arabidopsis thaliana HOM05D000922 ORTHO05D007418 1.5e-204 717.6 1105 42.2
BraA01t02462Z Brassica rapa HOM05D000922 ORTHO05D007418 1.5e-204 717.6 1111 41.4
ATR1091G081 Amborella trichopoda HOM05D000922 ORTHO05D007418 7.4e-204 715.3 1190 41.3
A01p25510 Brassica napus HOM05D000922 ORTHO05D007418 2.9e-200 703.4 835 48.6
THA.LOC104798972 Tarenaya hassleriana HOM05D000922 ORTHO05D007418 1.1e-196 691.4 1086 43.4
HPP92_009707 Vanilla planifolia HOM05D000922 ORTHO05D007418 8.5e-184 648.7 1039 39.9
CDE06G1806 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 2.5e-183 647.1 1073 40.3
unitig_26.g9619 Utricularia gibba HOM05D000922 ORTHO05D007418 5.5e-183 646.0 1164 37.4
Os01g0549500 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D007418 3.4e-177 626.7 574 55.6
Nitab4.5_0000025g0520 Nicotiana tabacum HOM05D000922 ORTHO05D007418 6.1e-174 615.9 1163 38.2
CsaV3_1G001450 Cucumis sativus L. HOM05D000922 ORTHO05D007418 5.0e-152 543.1 947 40.3
vmacro19400 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 3.3e-135 487.3 598 52.8
COL.COLO4_30068 Corchorus olitorius HOM05D000922 ORTHO05D007418 1.0e-133 482.3 917 37.6
Zm00001eb162380 Zea mays HOM05D000922 ORTHO05D007418 6.8e-133 479.6 440 57.3
SHI17077 Sapria himalayana HOM05D000922 ORTHO05D007418 6.4e-131 473.0 822 36.7
Cpa.g.sc2974.2 Carica papaya HOM05D000922 ORTHO05D007418 4.0e-125 453.8 316 69.9
SEGI_19196 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 1.3e-123 448.7 1132 34.2
SMO367G0209 Selaginella moellendorffii HOM05D000922 ORTHO05D007418 2.7e-121 441.0 529 44.4
SEGI_24933 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 3.5e-121 440.7 612 43.6
Mapoly0023s0026 Marchantia polymorpha HOM05D000922 ORTHO05D007418 1.3e-120 438.7 514 47.3
Pp3c26_1280 Physcomitrium patens HOM05D000922 ORTHO05D007418 1.4e-117 428.7 623 40.9
Dinv20638 Davidia involucrata HOM05D000922 ORTHO05D007418 5.2e-109 400.2 845 36.3
Cpa.g.sc2974.1 Carica papaya HOM05D000922 ORTHO05D007418 1.4e-98 365.5 822 37.6
ECA246G0682 Erigeron canadensis HOM05D000922 ORTHO05D007418 9.9e-92 342.8 743 36.5
ECA246G4214 Erigeron canadensis HOM05D000922 ORTHO05D007418 1.7e-75 288.9 225 61.8
C01p31950 Brassica napus HOM05D000922 ORTHO05D007418 2.2e-70 271.9 745 32.3
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 3.7e-38 164.9 149 66.4
CDE07G0520 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 3.0e-32 145.2 276 34.4
Lalb_Chr23g0273291 Lupinus albus HOM05D000922 ORTHO05D007418 5.2e-32 144.4 607 27.3
Actinidia33076 Actinidia chinensis HOM05D000922 ORTHO05D007418 6.3e-22 110.9 187 41.7
Peaxi162Scf00009g02111 Petunia axillaris HOM05D000861 ORTHO05D007418 3.3e-18 98.6 131 42.0
PRCOL_00005721 Prasinoderma coloniale HOM05D000922 ORTHO05D007418 1.2e-17 96.7 229 30.6
Peaxi162Scf00470g00024 Petunia axillaris HOM05D000861 ORTHO05D007418 2.1e-17 95.9 102 49.0
Psat4g066520 Pisum sativum HOM05D001026 ORTHO05D007418 3.6e-17 95.1 91 54.9
Peaxi162Scf00397g00009 Petunia axillaris HOM05D000922 ORTHO05D015732 1.4e-16 93.2 57 70.2
Peaxi162Scf01130g00212 Petunia axillaris HOM05D000861 ORTHO05D007418 4.0e-16 91.7 51 78.4
CAN.G1651.1 Capsicum annuum HOM05D003439 ORTHO05D000484 5.2e-16 91.3 69 63.8
Peaxi162Scf00304g01332 Petunia axillaris HOM05D000922 ORTHO05D007418 8.9e-16 90.5 79 54.4
FAN04G1664 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.1e-10 73.6 78 56.4
Cfa000646 Carpinus fangiana HOM05D000922 ORTHO05D007418 4.3e-10 71.6 160 36.9


User provided reference genes

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