Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017959 Camellia sinensis var. sinensis HOM05D003929 ORTHO05D004499 1.9e-290 1001.9 557 100.0
Dinv20657 Davidia involucrata HOM05D003929 ORTHO05D004499 1.3e-188 663.7 506 75.9
Dinv02898 Davidia involucrata HOM05D003929 ORTHO05D004499 6.9e-187 657.9 498 77.7
Rhsim08G0171800 Rhododendron simsii HOM05D003929 ORTHO05D004499 4.5e-186 655.2 519 76.7
vmacro19383 Vaccinium macrocarpon HOM05D003929 ORTHO05D004499 4.3e-173 612.1 531 67.0
Hma1.2p1_0176F.1_g077430 Hydrangea macrophylla HOM05D003929 ORTHO05D004499 2.2e-164 583.2 498 67.3
TWI14G0242 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 4.2e-160 568.9 503 64.2
QL10p011722 Quercus lobata HOM05D003929 ORTHO05D004499 3.0e-158 562.8 496 66.5
GSVIVG01007750001 Vitis vinifera HOM05D003929 ORTHO05D004499 1.3e-156 557.4 500 64.2
CiPaw.11G026500 Carya illinoinensis HOM05D003929 ORTHO05D004499 2.4e-155 553.1 496 64.1
Atru.chr9.2475 Acer truncatum HOM05D003929 ORTHO05D004499 3.4e-154 549.3 497 64.6
Nitab4.5_0001017g0080 Nicotiana tabacum HOM05D003929 ORTHO05D004499 3.4e-154 549.3 500 62.6
Duzib068G1333 Durio zibethinus HOM05D003929 ORTHO05D004499 5.5e-152 542.0 506 64.6
Prupe.5G174100 Prunus persica HOM05D003929 ORTHO05D004499 7.2e-152 541.6 502 62.9
TAR374G1605 Trochodendron aralioides HOM05D003929 ORTHO05D004499 4.7e-151 538.9 524 62.6
Potri.012G080800 Populus trichocarpa HOM05D003929 ORTHO05D004499 1.5e-149 533.9 498 62.7
ECA232G3264 Erigeron canadensis HOM05D003929 ORTHO05D004499 2.6e-149 533.1 496 62.9
Oeu016382.1 Olea europaea HOM05D003929 ORTHO05D004499 3.3e-149 532.7 500 64.0
TWI39G0937 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 9.7e-149 531.2 501 62.1
CAN.G628.79 Capsicum annuum HOM05D003929 ORTHO05D004499 2.8e-148 529.6 500 61.6
TAR622G0564 Trochodendron aralioides HOM05D003929 ORTHO05D004499 2.8e-148 529.6 520 60.6
Cpa.g.sc770.1 Carica papaya HOM05D003929 ORTHO05D004499 3.5e-146 522.7 496 62.3
Duzib205G0135 Durio zibethinus HOM05D003929 ORTHO05D004499 5.9e-146 521.9 504 62.7
Cfa019114 Carpinus fangiana HOM05D003929 ORTHO05D004499 1.0e-145 521.2 525 60.4
TWI31G0970 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 1.0e-145 521.2 501 61.3
Actinidia19318 Actinidia chinensis HOM05D003929 ORTHO05D004499 1.7e-145 520.4 421 74.8
SalBow5G2324 Salvia bowleyana HOM05D003929 ORTHO05D004499 2.9e-145 519.6 503 61.8
FvH4_5g05290 Fragaria vesca HOM05D003929 ORTHO05D004499 2.5e-144 516.5 492 62.6
Solyc06g071470.4 Solanum lycopersicum HOM05D003929 ORTHO05D004499 4.2e-144 515.8 501 61.7
Sopen06g027750 Solanum pennellii HOM05D003929 ORTHO05D004499 5.5e-144 515.4 501 61.9
Thecc.03G012300 Theobroma cacao HOM05D003929 ORTHO05D004499 5.5e-144 515.4 506 61.5
FAN18G3294 Fragaria x ananassa HOM05D003929 ORTHO05D004499 7.2e-144 515.0 492 61.4
PGSC0003DMG400027090 Solanum tuberosum HOM05D003929 ORTHO05D004499 7.2e-144 515.0 501 61.7
FAN04G3176 Fragaria x ananassa HOM05D003929 ORTHO05D004499 9.4e-144 514.6 492 62.2
FAN13G1321 Fragaria x ananassa HOM05D003929 ORTHO05D004499 3.6e-143 512.7 492 62.2
CAN.G781.12 Capsicum annuum HOM05D003929 ORTHO05D004499 8.0e-143 511.5 495 59.0
FAN18G3765 Fragaria x ananassa HOM05D003929 ORTHO05D004499 8.0e-143 511.5 492 62.2
RcHm_v2.0_Chr7g0193581 Rosa chinensis HOM05D003929 ORTHO05D004499 8.0e-143 511.5 493 62.3
HanXRQChr16g0504021 Helianthus annuus HOM05D003929 ORTHO05D004499 1.8e-142 510.4 502 62.0
MSTRG.11449 Avicennia marina HOM05D003929 ORTHO05D004499 2.3e-142 510.0 499 64.9
Potri.015G076100 Populus trichocarpa HOM05D003929 ORTHO05D004499 2.3e-142 510.0 497 62.8
Actinidia33066 Actinidia chinensis HOM05D003929 ORTHO05D004499 3.0e-142 509.6 480 70.2
Gohir.A12G274000 Gossypium hirsutum HOM05D003929 ORTHO05D004499 3.0e-142 509.6 494 60.5
Peaxi162Scf00017g02914 Petunia axillaris HOM05D003929 ORTHO05D004499 3.0e-142 509.6 492 60.4
Gorai.008G295200 Gossypium raimondii HOM05D003929 ORTHO05D004499 8.8e-142 508.1 494 60.3
Gohir.D12G274700 Gossypium hirsutum HOM05D003929 ORTHO05D004499 4.4e-141 505.8 494 60.1
CANSAT80G0843 Cannabis sativa HOM05D003929 ORTHO05D004499 7.5e-141 505.0 495 64.0
Lj5C124G9 Lonicera japonica HOM05D003929 ORTHO05D004499 3.7e-140 502.7 493 63.7
CiPaw.12G026400 Carya illinoinensis HOM05D003929 ORTHO05D004499 4.8e-140 502.3 501 60.9
Manes.06G104600 Manihot esculenta HOM05D003929 ORTHO05D004499 6.3e-140 501.9 494 61.9
DCAR_026132 Daucus carota HOM05D003929 ORTHO05D004499 1.1e-139 501.1 498 60.2
Eucgr.B00317 Eucalyptus grandis HOM05D003929 ORTHO05D004499 7.0e-139 498.4 493 58.8
Manes.14G066000 Manihot esculenta HOM05D003929 ORTHO05D004499 1.0e-137 494.6 497 63.6
MD14G1180600 Malus domestica HOM05D003929 ORTHO05D004499 3.2e-136 489.6 479 61.0
Haze_07467 Corylus avellana HOM05D003929 ORTHO05D004499 9.4e-136 488.0 587 54.0
Hma1.2p1_0000F.1_g000890 Hydrangea macrophylla HOM05D003929 ORTHO05D004499 4.0e-134 482.6 503 58.4
MD06G1174100 Malus domestica HOM05D003929 ORTHO05D004499 1.5e-133 480.7 482 61.2
PGR083G1389 Punica granatum HOM05D003929 ORTHO05D004499 7.5e-133 478.4 502 56.4
Cc04_g14000 Coffea canephora HOM05D003929 ORTHO05D004499 1.7e-132 477.2 493 59.2
Nitab4.5_0009783g0030 Nicotiana tabacum HOM05D003929 ORTHO05D004499 6.3e-132 475.3 495 56.0
Lj4g0023186 Lotus japonicus HOM05D003929 ORTHO05D004499 1.2e-130 471.1 496 59.9
Lsat_1_v5_gn_4_75281 Lactuca sativa HOM05D003929 ORTHO05D004499 1.3e-129 467.6 550 55.5
Lalb_Chr13g0297821 Lupinus albus HOM05D003929 ORTHO05D004499 5.0e-129 465.7 492 56.3
ClCG06G017000 Citrullus lanatus HOM05D003929 ORTHO05D004499 5.5e-128 462.2 491 57.8
Peaxi162Scf00689g00222 Petunia axillaris HOM05D003929 ORTHO05D004499 2.7e-127 459.9 501 54.3
CSS0023375 Camellia sinensis var. sinensis HOM05D003929 ORTHO05D004499 3.6e-127 459.5 278 98.6
FAN08G2589 Fragaria x ananassa HOM05D003929 ORTHO05D004499 6.1e-127 458.8 493 57.6
TPR.G37553 Trifolium pratense HOM05D003929 ORTHO05D004499 4.0e-126 456.1 491 53.4
PSO063G6021 Papaver somniferum HOM05D003929 ORTHO05D004499 4.4e-125 452.6 517 53.4
Medtr4g106880 Medicago truncatula HOM05D003929 ORTHO05D004499 5.7e-125 452.2 491 58.7
Sed0022246 Sechium edule HOM05D003929 ORTHO05D004499 2.2e-124 450.3 497 57.3
Aqoxy3G02955 Aquilegia oxysepala HOM05D003929 ORTHO05D004499 1.1e-123 448.0 481 58.0
Glyma.06G182600 Glycine max HOM05D003929 ORTHO05D004499 1.8e-123 447.2 468 55.8
Nn1g01975 Nelumbo nucifera HOM05D003929 ORTHO05D004499 5.9e-122 442.2 507 53.8
Glyma.17G089700 Glycine max HOM05D003929 ORTHO05D004499 2.3e-121 440.3 492 55.5
Phvul.003G200200 Phaseolus vulgaris HOM05D003929 ORTHO05D004499 3.8e-121 439.5 493 54.8
Hund09434 Selenicereus undatus HOM05D003929 ORTHO05D004499 5.6e-120 435.6 494 55.1
Phvul.009G178800 Phaseolus vulgaris HOM05D003929 ORTHO05D004499 1.6e-119 434.1 491 52.3
Ca_21916_v3 Cicer arietinum L. HOM05D003929 ORTHO05D004499 6.1e-119 432.2 488 56.1
MELO3C026291.2 Cucumis melo HOM05D003929 ORTHO05D004499 6.1e-119 432.2 490 55.9
Nitab4.5_0007719g0020 Nicotiana tabacum HOM05D003929 ORTHO05D004499 6.1e-119 432.2 495 53.9
CsaV3_1G001520 Cucumis sativus L. HOM05D003929 ORTHO05D004499 8.0e-119 431.8 500 54.8
VMungo1215G1851 Vigna mungo HOM05D003929 ORTHO05D004499 4.0e-118 429.5 487 55.0
Migut.I00015 Erythranthe guttata HOM05D003929 ORTHO05D004499 5.2e-118 429.1 507 56.8
SalBow5G2758 Salvia bowleyana HOM05D003929 ORTHO05D004499 7.5e-117 425.2 501 52.1
VMungo1309G0717 Vigna mungo HOM05D003929 ORTHO05D004499 4.9e-116 422.5 488 50.4
EL10Ac5g10751 Beta vulgaris HOM05D003929 ORTHO05D004499 6.4e-116 422.2 495 52.1
Glyma.05G037400 Glycine max HOM05D003929 ORTHO05D004499 9.2e-115 418.3 496 51.0
arahy.Tifrunner.gnm1.ann1.S02CG0 Arachis hypogaea HOM05D003929 ORTHO05D004499 2.7e-114 416.8 509 50.1
Ciclev10024320m.g Citrus clementina HOM05D003929 ORTHO05D004499 4.6e-114 416.0 399 67.7
Solyc03g114330.3 Solanum lycopersicum HOM05D003929 ORTHO05D004499 2.3e-113 413.7 495 51.1
arahy.Tifrunner.gnm1.ann1.R24CC5 Arachis hypogaea HOM05D003929 ORTHO05D004499 3.0e-113 413.3 510 50.6
PSO832G4520 Papaver somniferum HOM05D003929 ORTHO05D004499 1.1e-112 411.4 517 50.3
AT5G62810 Arabidopsis thaliana HOM05D003929 ORTHO05D004499 9.5e-112 408.3 527 48.4
AL8G39770 Arabidopsis lyrata HOM05D003929 ORTHO05D004499 6.2e-111 405.6 486 51.2
Carub.0008s2353 Capsella rubella HOM05D003929 ORTHO05D004499 1.8e-110 404.1 523 48.4
Aa31LG11G880 Aethionema arabicum HOM05D003929 ORTHO05D004499 3.4e-109 399.8 509 49.5
MBI10_g41915_MAGBIO Magnolia biondii HOM05D003929 ORTHO05D004499 5.8e-109 399.1 514 51.2
THA.LOC104818232 Tarenaya hassleriana HOM05D003929 ORTHO05D004499 9.8e-109 398.3 499 52.9
Lalb_Chr11g0071231 Lupinus albus HOM05D003929 ORTHO05D004499 3.7e-108 396.4 515 48.7
Ah.11g051630 Amaranthus hybridus HOM05D003618 ORTHO05D004302 8.3e-108 395.2 491 49.3
BolC9t53798H Brassica oleracea HOM05D003929 ORTHO05D004499 1.1e-107 394.8 529 47.6
Lj1g0005514 Lotus japonicus HOM05D003929 ORTHO05D004499 2.4e-107 393.7 498 50.6
BcaC04g23392 Brassica carinata HOM05D003929 ORTHO05D004499 5.4e-107 392.5 529 47.4
THA.LOC104821459 Tarenaya hassleriana HOM05D003929 ORTHO05D004499 7.0e-107 392.1 492 53.5
PGR044G0511 Punica granatum HOM05D003929 ORTHO05D004499 1.2e-106 391.3 499 50.9
CARHR276590 Cardamine hirsuta HOM05D003929 ORTHO05D004499 1.6e-106 391.0 510 48.6
Nitab4.5_0000003g0590 Nicotiana tabacum HOM05D003929 ORTHO05D004499 2.0e-106 390.6 500 48.0
C09p08860 Brassica napus HOM05D003929 ORTHO05D004499 3.5e-106 389.8 526 47.3
Sp2g25960 Schrenkiella parvula HOM05D003929 ORTHO05D004499 6.0e-106 389.0 523 47.4
BcaB02g09694 Brassica carinata HOM05D003929 ORTHO05D004499 7.8e-106 388.7 487 49.9
BraA06t25903Z Brassica rapa HOM05D003929 ORTHO05D004499 7.8e-106 388.7 495 48.9
A06p29570 Brassica napus HOM05D003929 ORTHO05D004499 1.0e-105 388.3 493 48.5
C03p63930 Brassica napus HOM05D003929 ORTHO05D004499 5.0e-105 386.0 503 48.5
BcaC01g02523 Brassica carinata HOM05D003929 ORTHO05D004499 1.1e-104 384.8 503 48.3
BraA09t36437Z Brassica rapa HOM05D003929 ORTHO05D004499 1.1e-104 384.8 491 49.7
Thhalv10004017m.g Eutrema salsugineum HOM05D003929 ORTHO05D004499 1.1e-104 384.8 501 48.7
A09p07860 Brassica napus HOM05D003929 ORTHO05D004499 1.9e-104 384.0 497 48.5
BolC3t18647H Brassica oleracea HOM05D003929 ORTHO05D004499 2.1e-103 380.6 505 48.1
COL.COLO4_30035 Corchorus olitorius HOM05D003929 ORTHO05D004499 1.1e-102 378.3 506 49.0
arahy.Tifrunner.gnm1.ann1.W2DQVT Arachis hypogaea HOM05D003929 ORTHO05D004499 1.5e-101 374.4 520 51.0
SGA_v2.0_scaffold90G27941 Striga asiatica HOM05D003929 ORTHO05D004499 9.2e-99 365.2 513 48.3
Lalb_Chr07g0182721 Lupinus albus HOM05D003929 ORTHO05D004499 2.1e-98 364.0 492 48.2
Sopen03g033430 Solanum pennellii HOM05D003929 ORTHO05D004499 2.1e-98 364.0 496 47.2
Psat4g057880 Pisum sativum HOM05D003929 ORTHO05D004499 4.7e-95 352.8 353 56.9
Sed0009068 Sechium edule HOM05D003929 ORTHO05D004499 1.4e-91 341.3 355 60.6
Migut.D01928 Erythranthe guttata HOM05D003929 ORTHO05D004499 4.1e-91 339.7 497 46.9
AUR62030967 Chenopodium quinoa HOM05D003929 ORTHO05D004499 1.2e-90 338.2 510 47.8
Sc04g0001820 Simmondsia chinensis HOM05D003929 ORTHO05D004499 4.3e-88 329.7 344 57.3
ATR0730G040 Amborella trichopoda HOM05D003929 ORTHO05D004499 2.1e-87 327.4 541 42.9
CDE05G2632 Ceratophyllum demersum HOM05D003929 ORTHO05D004499 2.8e-87 327.0 479 45.5
CDE11G0983 Ceratophyllum demersum HOM05D003929 ORTHO05D004499 5.8e-85 319.3 489 44.2
Atru.chr11.2035 Acer truncatum HOM05D003929 ORTHO05D004499 3.3e-80 303.5 450 44.7
AUR62008214 Chenopodium quinoa HOM05D003929 ORTHO05D004499 5.6e-80 302.8 493 42.0
Oeu024692.2 Olea europaea HOM05D003929 ORTHO05D004499 1.4e-78 298.1 288 67.0
SEGI_11105 Sequoiadendron giganteum HOM05D003929 ORTHO05D004499 7.6e-77 292.4 540 39.4
HPP92_021833 Vanilla planifolia HOM05D003929 ORTHO05D004499 1.4e-75 288.1 379 50.4
Oeu022163.1 Olea europaea HOM05D003929 ORTHO05D004499 8.7e-73 278.9 265 59.6
Lj9A449T48 Lonicera japonica HOM05D003929 ORTHO05D004499 2.8e-71 273.9 259 59.5
Thecc.02G250700 Theobroma cacao HOM05D003929 ORTHO05D004499 1.9e-67 261.2 400 41.8
unitig_749.g13474 Utricularia gibba HOM05D003929 ORTHO05D004499 1.0e-65 255.4 418 39.0
Gohir.A03G139300 Gossypium hirsutum HOM05D003929 ORTHO05D004499 3.2e-59 233.8 398 41.0
Gohir.D02G162200 Gossypium hirsutum HOM05D003929 ORTHO05D004499 2.7e-58 230.7 398 40.7
Gorai.005G182200 Gossypium raimondii HOM05D003929 ORTHO05D004499 2.3e-57 227.6 398 40.7
COL.COLO4_24172 Corchorus olitorius HOM05D003929 ORTHO05D004499 1.1e-56 225.3 389 41.1
Psat4g209200 Pisum sativum HOM05D003929 ORTHO05D004499 5.9e-53 213.0 308 46.1
Cfa019127 Carpinus fangiana HOM05D003929 ORTHO05D004499 4.2e-51 206.8 185 63.2
Hund02741 Selenicereus undatus HOM05D003929 ORTHO05D004499 3.7e-47 193.7 460 35.9
Zm00001eb356320 Zea mays HOM05D003929 ORTHO05D004499 2.0e-45 188.0 467 35.3
Zm00001eb267680 Zea mays HOM05D003929 ORTHO05D004499 4.5e-45 186.8 472 32.4
arahy.Tifrunner.gnm1.ann1.49JIZL Arachis hypogaea HOM05D003929 ORTHO05D004499 6.9e-38 162.9 219 47.5
Os05g0101200 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 3.4e-37 160.6 490 31.6
Mapoly0102s0017 Marchantia polymorpha HOM05D003929 ORTHO05D004499 3.6e-34 150.6 481 31.0
HanXRQChr16g0526511 Helianthus annuus HOM05D004647 ORTHO05D005349 1.8e-33 148.3 237 50.2
FAN24G3310 Fragaria x ananassa HOM05D003929 ORTHO05D004499 5.2e-33 146.7 277 40.4
PSO135G0191 Papaver somniferum HOM05D003929 ORTHO05D004499 9.7e-32 142.5 155 52.9
PGR044G1312 Punica granatum HOM05D003929 ORTHO05D004499 3.7e-31 140.6 172 48.3
Os01g0107000 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 2.4e-30 137.9 204 41.7
Zm00001eb126680 Zea mays HOM05D003929 ORTHO05D004499 2.4e-30 137.9 445 30.1
Actinidia19319 Actinidia chinensis HOM05D003618 ORTHO05D004302 1.3e-28 132.1 203 58.6
Pp3c9_20380 Physcomitrium patens HOM05D003929 ORTHO05D004499 1.0e-25 122.5 226 35.8
AagrBONN_evm.TU.Sc2ySwM_117.2261 Anthoceros agrestis HOM05D003929 ORTHO05D004499 4.0e-25 120.6 151 47.0
CBR_g3508 Chara braunii HOM05D003929 ORTHO05D004499 4.4e-24 117.1 277 36.1
Pp3c15_21860 Physcomitrium patens HOM05D003929 ORTHO05D004499 1.7e-23 115.2 285 34.0
Lj9A449G50 Lonicera japonica HOM05D003929 ORTHO05D004499 2.8e-23 114.4 127 54.3
SHI17029 Sapria himalayana HOM05D003929 ORTHO05D004499 2.7e-21 107.8 145 42.1
PGSC0003DMG400024502 Solanum tuberosum HOM05D003929 ORTHO05D004499 1.0e-20 105.9 107 57.9
Nitab4.5_0000866g0190 Nicotiana tabacum HOM05D003929 ORTHO05D004499 4.2e-19 100.5 120 50.8
SHI17030 Sapria himalayana HOM05D003929 ORTHO05D004499 4.7e-18 97.1 84 58.3
ClCG01G013120 Citrullus lanatus HOM05D003929 ORTHO05D004499 1.7e-15 88.6 112 45.5
CBR_g10793 Chara braunii HOM05D027206 ORTHO05D004499 5.4e-14 83.6 83 55.4
Os05g0578000 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 3.2e-11 74.3 87 50.6
CBR_g3506 Chara braunii HOM05D003929 ORTHO05D004499 6.1e-10 70.1 64 50.0
Cre10.g454025 Chlamydomonas reinhardtii HOM05D003929 ORTHO05D004499 1.0e-09 69.3 82 50.0
Zm00001eb296750 Zea mays HOM05D003929 ORTHO05D004499 1.2e-08 65.9 86 45.3
MCO04G191 Micromonas commoda HOM05D003929 ORTHO05D004499 1.8e-06 58.5 405 27.9


User provided reference genes

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