Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017958 Camellia sinensis var. sinensis HOM05D007558 ORTHO05D009245 6.3e-64 247.3 125 100.0
CSS0045389 Camellia sinensis var. sinensis HOM05D007558 ORTHO05D009245 7.8e-22 107.5 129 51.9
Hma1.2p1_0536F.1_g173970 Hydrangea macrophylla HOM05D007558 ORTHO05D009245 3.0e-21 105.5 120 54.2
Dinv15286 Davidia involucrata HOM05D000812 ORTHO05D000672 1.1e-20 103.6 119 52.9
Actinidia08162 Actinidia chinensis HOM05D007558 ORTHO05D009245 2.5e-20 102.4 130 53.1
QL03p060106 Quercus lobata HOM05D007558 ORTHO05D009245 4.0e-18 95.1 112 54.5
Lj4g0018280 Lotus japonicus HOM05D007558 ORTHO05D009245 8.9e-18 94.0 126 50.8
FAN12G2944 Fragaria x ananassa HOM05D007558 ORTHO05D009245 1.5e-17 93.2 114 50.0
FAN17G0543 Fragaria x ananassa HOM05D007558 ORTHO05D009245 1.5e-17 93.2 113 49.6
RcHm_v2.0_Chr4g0443731 Rosa chinensis HOM05D007558 ORTHO05D009245 9.8e-17 90.5 114 50.9
TPR.G11726 Trifolium pratense HOM05D007558 ORTHO05D009245 2.9e-16 89.0 97 52.6
Prupe.1G252500 Prunus persica HOM05D007558 ORTHO05D009245 3.7e-16 88.6 127 47.2
ClCG05G025370 Citrullus lanatus HOM05D007558 ORTHO05D009245 1.4e-15 86.7 104 51.0
FvH4_4g34300 Fragaria vesca HOM05D007558 ORTHO05D009245 1.4e-15 86.7 116 49.1
Nitab4.5_0004636g0010 Nicotiana tabacum HOM05D007558 ORTHO05D009245 1.4e-15 86.7 116 45.7
TPR.G11688 Trifolium pratense HOM05D007558 ORTHO05D009245 1.4e-15 86.7 100 53.0
VMungo1215G0509 Vigna mungo HOM05D007558 ORTHO05D009245 1.9e-15 86.3 112 45.5
ECA233G1669 Erigeron canadensis HOM05D007558 ORTHO05D009245 2.4e-15 85.9 89 53.9
FAN07G0793 Fragaria x ananassa HOM05D007558 ORTHO05D009245 4.1e-15 85.1 114 48.2
Lalb_Chr09g0334981 Lupinus albus HOM05D007558 ORTHO05D009245 4.1e-15 85.1 119 47.9
Nn4g22760 Nelumbo nucifera HOM05D007558 ORTHO05D009245 4.1e-15 85.1 118 50.0
Potri.010G041600 Populus trichocarpa HOM05D007558 ORTHO05D009245 5.4e-15 84.7 129 45.0
FAN22G1900 Fragaria x ananassa HOM05D007558 ORTHO05D009245 9.2e-15 84.0 114 47.4
COL.COLO4_24179 Corchorus olitorius HOM05D007558 ORTHO05D009245 1.2e-14 83.6 108 50.0
DCAR_026537 Daucus carota HOM05D007558 ORTHO05D009245 1.2e-14 83.6 106 49.1
Medtr5g034200 Medicago truncatula HOM05D007558 ORTHO05D009245 1.6e-14 83.2 106 48.1
SGA_v2.0_scaffold8G04208 Striga asiatica HOM05D007558 ORTHO05D009245 1.6e-14 83.2 121 45.5
Ciclev10032958m.g Citrus clementina HOM05D007558 ORTHO05D009245 3.5e-14 82.0 127 44.1
Lj2g0015975 Lotus japonicus HOM05D007558 ORTHO05D009245 3.5e-14 82.0 107 46.7
Peaxi162Scf00710g00042 Petunia axillaris HOM05D020724 ORTHO05D009245 3.5e-14 82.0 130 46.2
TWI18G1040 Tripterygium wilfordii HOM05D007558 ORTHO05D009245 3.5e-14 82.0 122 46.7
Cfa009155 Carpinus fangiana HOM05D007558 ORTHO05D009245 6.0e-14 81.3 112 51.8
Glyma.08G286300 Glycine max HOM05D007558 ORTHO05D009245 6.0e-14 81.3 123 48.8
CiPaw.06G071200 Carya illinoinensis HOM05D007558 ORTHO05D009245 7.8e-14 80.9 109 48.6
MD13G1093000 Malus domestica HOM05D007558 ORTHO05D009245 1.0e-13 80.5 128 46.9
Nn3g16851 Nelumbo nucifera HOM05D007558 ORTHO05D009245 1.0e-13 80.5 115 48.7
MD16G1094000 Malus domestica HOM05D007558 ORTHO05D009245 1.3e-13 80.1 137 44.5
MELO3C011993.2 Cucumis melo HOM05D007558 ORTHO05D009245 3.9e-13 78.6 106 50.0
Lsat_1_v5_gn_8_155581 Lactuca sativa HOM05D007558 ORTHO05D009245 3.9e-13 78.6 116 45.7
Lalb_Chr05g0216831 Lupinus albus HOM05D007558 ORTHO05D009245 3.9e-13 78.6 112 43.8
Manes.12G027900 Manihot esculenta HOM05D007558 ORTHO05D009245 3.9e-13 78.6 124 45.2
Duzib268G0018 Durio zibethinus HOM05D007558 ORTHO05D009245 5.1e-13 78.2 121 46.3
Phvul.002G070800 Phaseolus vulgaris HOM05D007558 ORTHO05D009245 5.1e-13 78.2 113 44.2
Oeu054057.1 Olea europaea HOM05D007558 ORTHO05D009245 6.6e-13 77.8 129 38.8
GSVIVG01013748001 Vitis vinifera HOM05D007558 ORTHO05D009245 6.6e-13 77.8 95 49.5
Aqoxy3G02932 Aquilegia oxysepala HOM05D007558 ORTHO05D009245 1.1e-12 77.0 108 44.4
ECA234G1002 Erigeron canadensis HOM05D007558 ORTHO05D009245 1.1e-12 77.0 108 47.2
TAR374G1667 Trochodendron aralioides HOM05D007558 ORTHO05D009245 1.1e-12 77.0 118 45.8
Duzib248G0521 Durio zibethinus HOM05D007558 ORTHO05D009245 1.5e-12 76.6 113 44.2
Phvul.003G060900 Phaseolus vulgaris HOM05D007558 ORTHO05D009245 1.9e-12 76.3 100 52.0
Gohir.A12G143200 Gossypium hirsutum HOM05D007558 ORTHO05D009245 3.3e-12 75.5 125 44.0
Gohir.D12G147900 Gossypium hirsutum HOM05D007558 ORTHO05D009245 3.3e-12 75.5 125 44.0
Gorai.008G159200 Gossypium raimondii HOM05D007558 ORTHO05D009245 3.3e-12 75.5 125 44.0
Nitab4.5_0000034g0280 Nicotiana tabacum HOM05D007558 ORTHO05D009245 3.3e-12 75.5 97 47.4
Thecc.02G251400 Theobroma cacao HOM05D007558 ORTHO05D009245 3.3e-12 75.5 120 43.3
Sed0009378 Sechium edule HOM05D007558 ORTHO05D009245 4.3e-12 75.1 125 48.0
MSTRG.7902 Avicennia marina HOM05D007558 ORTHO05D009245 5.6e-12 74.7 121 46.3
CAN.G126.6 Capsicum annuum HOM05D007558 ORTHO05D009245 5.6e-12 74.7 115 44.3
DCAR_007085 Daucus carota HOM05D007558 ORTHO05D009245 5.6e-12 74.7 97 43.3
Glyma.02G035400 Glycine max HOM05D007558 ORTHO05D009245 9.5e-12 73.9 108 44.4
Psat4g124320 Pisum sativum HOM05D007558 ORTHO05D009245 1.2e-11 73.6 109 45.0
Glyma.01G030000 Glycine max HOM05D007558 ORTHO05D009245 1.6e-11 73.2 112 42.9
Gohir.A04G135600 Gossypium hirsutum HOM05D007558 ORTHO05D009245 2.1e-11 72.8 113 47.8
Gorai.012G171800 Gossypium raimondii HOM05D007558 ORTHO05D009245 2.1e-11 72.8 111 47.7
Gohir.D04G178700 Gossypium hirsutum HOM05D007558 ORTHO05D009245 2.8e-11 72.4 111 47.7
PGR102G1011 Punica granatum HOM05D007558 ORTHO05D009245 1.1e-10 70.5 107 42.1
Lsat_1_v5_gn_4_5541 Lactuca sativa HOM05D007558 ORTHO05D009245 1.8e-10 69.7 113 42.5
Lalb_Chr16g0382221 Lupinus albus HOM05D007558 ORTHO05D009245 1.8e-10 69.7 111 44.1
PGSC0003DMG400027920 Solanum tuberosum HOM05D007558 ORTHO05D009245 3.1e-10 68.9 123 43.9
Gohir.D02G161900 Gossypium hirsutum HOM05D007558 ORTHO05D009245 4.0e-10 68.6 120 41.7
CiPaw.05G151900 Carya illinoinensis HOM05D007558 ORTHO05D009245 6.8e-10 67.8 114 44.7
Atru.chr11.2043 Acer truncatum HOM05D007558 ORTHO05D009245 1.5e-09 66.6 122 42.6
Gohir.A03G139000 Gossypium hirsutum HOM05D007558 ORTHO05D009245 1.5e-09 66.6 117 42.7
Oeu056732.1 Olea europaea HOM05D007558 ORTHO05D009245 1.5e-09 66.6 137 40.1
Sopen04g014760 Solanum pennellii HOM05D007558 ORTHO05D009245 2.6e-09 65.9 115 41.7
VMungo0251G2708 Vigna mungo HOM05D007558 ORTHO05D009245 2.6e-09 65.9 100 48.0
AUR62014050 Chenopodium quinoa HOM05D023191 ORTHO05D009245 4.4e-09 65.1 67 46.3
MBI16_g27096_MAGBIO Magnolia biondii HOM05D007558 ORTHO05D009245 4.4e-09 65.1 110 40.9
Carub.0002s1715 Capsella rubella HOM05D008527 ORTHO05D010701 1.3e-08 63.5 121 38.0
SalBow2G1747 Salvia bowleyana HOM05D007558 ORTHO05D009245 1.3e-08 63.5 79 48.1
unitig_26.g10360 Utricularia gibba HOM05D007558 ORTHO05D009245 1.3e-08 63.5 104 44.2
Sc11g0001140 Simmondsia chinensis HOM05D007558 ORTHO05D009245 2.2e-08 62.8 111 41.4
Solyc04g026250.1 Solanum lycopersicum HOM05D007558 ORTHO05D009245 2.2e-08 62.8 115 41.7
MSTRG.2398 Avicennia marina HOM05D007558 ORTHO05D009245 2.9e-08 62.4 116 37.1
Cpa.g.sc69.52 Carica papaya HOM05D001601 ORTHO05D002628 6.4e-08 61.2 125 42.4
AUR62005388 Chenopodium quinoa HOM05D023191 ORTHO05D009245 8.3e-08 60.8 85 40.0
CANSAT01G1746 Cannabis sativa HOM05D007558 ORTHO05D009245 1.4e-07 60.1 76 52.6
Nitab4.5_0000203g0180 Nicotiana tabacum HOM05D020724 ORTHO05D025910 1.4e-07 60.1 136 37.5
EL10Ac6g13681 Beta vulgaris HOM05D023191 ORTHO05D009245 1.9e-07 59.7 100 38.0
CsaV3_5G031540 Cucumis sativus L. HOM05D001601 ORTHO05D002628 2.4e-07 59.3 84 47.6
THA.LOC104822151 Tarenaya hassleriana HOM05D008527 ORTHO05D010701 2.4e-07 59.3 105 39.0
unitig_8.g3152 Utricularia gibba HOM05D007558 ORTHO05D009245 2.4e-07 59.3 86 45.3
Migut.E00166 Erythranthe guttata HOM05D007558 ORTHO05D009245 3.2e-07 58.9 133 36.8
MSTRG.591 Avicennia marina HOM05D007558 ORTHO05D009245 5.4e-07 58.2 108 41.7
Nitab4.5_0005678g0020 Nicotiana tabacum HOM05D020724 ORTHO05D025910 7.1e-07 57.8 134 35.8
BcaB07g32343 Brassica carinata HOM05D008527 ORTHO05D010701 9.2e-07 57.4 105 38.1
Aa31LG4G10480 Aethionema arabicum HOM05D008527 ORTHO05D010701 2.1e-06 56.2 139 33.1
unitig_22.g6434 Utricularia gibba HOM05D007558 ORTHO05D009245 2.7e-06 55.8 108 39.8
Ah.03g132750 Amaranthus hybridus HOM05D023191 ORTHO05D009245 3.5e-06 55.5 88 40.9
Migut.L01422 Erythranthe guttata HOM05D007558 ORTHO05D009245 3.5e-06 55.5 50 54.0
A02p16540 Brassica napus HOM05D008527 ORTHO05D010701 7.8e-06 54.3 98 34.7
BraA02t06712Z Brassica rapa HOM05D008527 ORTHO05D010701 7.8e-06 54.3 98 34.7


User provided reference genes

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