Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017957 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 1.6e-186 656.0 331 100.0
CSS0036459 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 3.1e-179 631.7 383 86.4
Actinidia18427 Actinidia chinensis HOM05D004896 ORTHO05D006447 7.8e-146 520.8 347 80.4
Hma1.2p1_1484F.1_g286400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.2e-141 506.9 334 79.3
Hma1.2p1_1407F.1_g281400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.3e-140 503.4 334 79.0
TAR629G1306 Trochodendron aralioides HOM05D004896 ORTHO05D006447 3.5e-138 495.4 336 78.0
GSVIVG01003974001 Vitis vinifera HOM05D004896 ORTHO05D006447 1.3e-137 493.4 334 76.9
Hma1.2p1_0383F.1_g140290 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.8e-134 483.0 322 78.3
Rhsim08G0046600 Rhododendron simsii HOM05D004896 ORTHO05D006447 1.8e-134 483.0 337 75.1
Lj7A604T65 Lonicera japonica HOM05D004896 ORTHO05D006447 5.2e-134 481.5 327 75.8
PGSC0003DMG400012644 Solanum tuberosum HOM05D004896 ORTHO05D006447 6.8e-134 481.1 339 74.0
Sopen02g038330 Solanum pennellii HOM05D004896 ORTHO05D006447 2.0e-133 479.6 340 74.1
Manes.15G155100 Manihot esculenta HOM05D004896 ORTHO05D006447 4.4e-133 478.4 337 74.5
Nn5g27187 Nelumbo nucifera HOM05D004896 ORTHO05D006447 4.4e-133 478.4 343 74.6
Dinv33394 Davidia involucrata HOM05D004896 ORTHO05D006447 1.3e-132 476.9 323 77.4
CAN.G473.48 Capsicum annuum HOM05D004896 ORTHO05D006447 4.9e-132 474.9 331 74.3
MBI19_g04325_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 4.9e-132 474.9 328 75.6
QL02p073334 Quercus lobata HOM05D004896 ORTHO05D006447 6.4e-132 474.6 338 72.2
MSTRG.3120 Avicennia marina HOM05D004896 ORTHO05D006447 1.9e-131 473.0 335 72.5
Solyc02g093690.3 Solanum lycopersicum HOM05D004896 ORTHO05D006447 1.9e-131 473.0 338 72.8
SGA_v2.0_scaffold135G34930 Striga asiatica HOM05D004896 ORTHO05D006447 9.3e-131 470.7 336 72.9
Migut.H00045 Erythranthe guttata HOM05D004896 ORTHO05D006447 1.2e-130 470.3 332 72.6
MD09G1019000 Malus domestica HOM05D004896 ORTHO05D006447 4.6e-130 468.4 339 72.0
Nitab4.5_0001031g0180 Nicotiana tabacum HOM05D004896 ORTHO05D006447 4.6e-130 468.4 337 72.7
Ciclev10015882m.g Citrus clementina HOM05D004896 ORTHO05D006447 1.3e-129 466.8 337 71.5
Aqoxy1G02023 Aquilegia oxysepala HOM05D004896 ORTHO05D006447 3.0e-129 465.7 326 73.9
Nitab4.5_0002158g0160 Nicotiana tabacum HOM05D004896 ORTHO05D006447 8.7e-129 464.2 339 71.4
Psat3g168560 Pisum sativum HOM05D004896 ORTHO05D006447 1.9e-128 463.0 332 72.6
Cpa.g.sc130.54 Carica papaya HOM05D004896 ORTHO05D006447 3.3e-128 462.2 337 72.1
FvH4_6g52290 Fragaria vesca HOM05D004896 ORTHO05D006447 3.3e-128 462.2 337 70.6
DCAR_021752 Daucus carota HOM05D004896 ORTHO05D006447 4.3e-128 461.8 331 72.2
RcHm_v2.0_Chr2g0173821 Rosa chinensis HOM05D004896 ORTHO05D006447 9.6e-128 460.7 342 70.2
Thecc.04G026600 Theobroma cacao HOM05D004896 ORTHO05D006447 6.2e-127 458.0 338 69.8
FAN14G4168 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.1e-126 457.2 337 69.7
Ca_03861_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 1.4e-126 456.8 331 72.2
Gohir.A05G342400 Gossypium hirsutum HOM05D004896 ORTHO05D006447 1.8e-126 456.4 334 70.4
PGR142G1575 Punica granatum HOM05D004896 ORTHO05D006447 5.3e-126 454.9 337 70.6
CANSAT64G0177 Cannabis sativa HOM05D004896 ORTHO05D006447 6.9e-126 454.5 336 69.6
Gorai.012G091200 Gossypium raimondii HOM05D004896 ORTHO05D006447 6.9e-126 454.5 334 70.1
Prupe.3G298100 Prunus persica HOM05D004896 ORTHO05D006447 1.5e-125 453.4 337 70.3
Hund14985 Selenicereus undatus HOM05D004896 ORTHO05D006447 2.0e-125 453.0 329 70.5
vmacro18309 Vaccinium macrocarpon HOM05D004896 ORTHO05D006447 2.0e-125 453.0 252 86.9
FAN02G3298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 3.4e-125 452.2 333 68.2
FAN09G1675 Fragaria x ananassa HOM05D004896 ORTHO05D006447 3.4e-125 452.2 333 68.2
TWI56G0223 Tripterygium wilfordii HOM05D004896 ORTHO05D006447 4.4e-125 451.8 346 69.1
FAN05G4015 Fragaria x ananassa HOM05D004896 ORTHO05D006447 5.8e-125 451.4 336 69.3
Lj1g0027814 Lotus japonicus HOM05D004896 ORTHO05D006447 5.8e-125 451.4 330 72.1
arahy.Tifrunner.gnm1.ann1.10VWGS Arachis hypogaea HOM05D004896 ORTHO05D006447 7.6e-125 451.1 266 83.5
arahy.Tifrunner.gnm1.ann1.5ILH08 Arachis hypogaea HOM05D004896 ORTHO05D006447 7.6e-125 451.1 266 83.5
Eucgr.I01701 Eucalyptus grandis HOM05D004896 ORTHO05D006447 7.6e-125 451.1 273 82.4
Potri.001G338200 Populus trichocarpa HOM05D004896 ORTHO05D006447 9.9e-125 450.7 337 70.6
EL10Ac5g10496 Beta vulgaris HOM05D004896 ORTHO05D006447 1.3e-124 450.3 328 71.0
Ah.12g059440 Amaranthus hybridus HOM05D004896 ORTHO05D006447 2.2e-124 449.5 331 71.0
Medtr0018s0290 Medicago truncatula HOM05D004896 ORTHO05D006447 2.2e-124 449.5 332 70.8
ClCG05G013000 Citrullus lanatus HOM05D004896 ORTHO05D006447 2.9e-124 449.1 347 69.5
Lsat_1_v5_gn_0_30781 Lactuca sativa HOM05D004896 ORTHO05D006447 3.8e-124 448.7 339 69.3
Sed0025595 Sechium edule HOM05D004896 ORTHO05D006447 1.1e-123 447.2 336 70.2
CiPaw.03G049000 Carya illinoinensis HOM05D004896 ORTHO05D006447 1.4e-123 446.8 342 69.6
EL10Ac9g21007 Beta vulgaris HOM05D004896 ORTHO05D006447 1.9e-123 446.4 328 70.4
Ca_01399_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 1.9e-123 446.4 332 71.4
ECA246G3787 Erigeron canadensis HOM05D004896 ORTHO05D006447 2.4e-123 446.0 315 72.1
PSO675G8471 Papaver somniferum HOM05D004896 ORTHO05D006447 2.4e-123 446.0 315 72.1
CsaV3_3G027540 Cucumis sativus L. HOM05D004896 ORTHO05D006447 3.2e-123 445.7 338 68.9
COL.COLO4_29242 Corchorus olitorius HOM05D004896 ORTHO05D006447 4.2e-123 445.3 334 68.9
Glyma.16G066000 Glycine max HOM05D004896 ORTHO05D006447 4.6e-122 441.8 335 69.6
Duzib264G0232 Durio zibethinus HOM05D004896 ORTHO05D006447 6.0e-122 441.4 336 69.0
PSO541G0959 Papaver somniferum HOM05D004896 ORTHO05D006447 6.0e-122 441.4 312 70.8
Cfa007299 Carpinus fangiana HOM05D004896 ORTHO05D006447 7.9e-122 441.0 338 70.1
VMungo1080G0372 Vigna mungo HOM05D004896 ORTHO05D006447 1.7e-121 439.9 316 73.1
Phvul.008G145713 Phaseolus vulgaris HOM05D004896 ORTHO05D006447 2.3e-121 439.5 330 70.6
ATR0099G063 Amborella trichopoda HOM05D004896 ORTHO05D006447 3.0e-121 439.1 266 79.3
Cc07_g00300 Coffea canephora HOM05D004896 ORTHO05D006447 3.9e-121 438.7 350 68.0
TPR.G1112 Trifolium pratense HOM05D004896 ORTHO05D006447 3.9e-121 438.7 329 70.5
HanXRQChr17g0549471 Helianthus annuus HOM05D004896 ORTHO05D006447 5.6e-120 434.9 331 68.6
Gohir.D04G080440 Gossypium hirsutum HOM05D004896 ORTHO05D006447 9.6e-120 434.1 319 70.2
AUR62030697 Chenopodium quinoa HOM05D004896 ORTHO05D006447 4.8e-119 431.8 250 82.8
Lalb_Chr14g0362991 Lupinus albus HOM05D004896 ORTHO05D006447 1.4e-118 430.3 334 68.6
CiPaw.04G032200 Carya illinoinensis HOM05D004896 ORTHO05D006447 6.9e-118 427.9 328 69.8
AUR62036338 Chenopodium quinoa HOM05D004896 ORTHO05D006447 9.0e-118 427.6 250 82.0
Haze_14796 Corylus avellana HOM05D004896 ORTHO05D006447 2.6e-117 426.0 325 69.8
unitig_0.g536 Utricularia gibba HOM05D004896 ORTHO05D006447 7.6e-117 424.5 329 67.2
C04p47490 Brassica napus HOM05D004896 ORTHO05D006447 1.2e-114 417.2 313 68.1
BolC4t26350H Brassica oleracea HOM05D004896 ORTHO05D006447 1.2e-114 417.2 313 68.1
THA.LOC104825307 Tarenaya hassleriana HOM05D004896 ORTHO05D006447 2.1e-114 416.4 334 65.0
A04p13700 Brassica napus HOM05D004896 ORTHO05D006447 4.6e-114 415.2 294 70.7
BraA04t17030Z Brassica rapa HOM05D004896 ORTHO05D006447 4.6e-114 415.2 294 70.7
CDE07G0249 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 4.6e-114 415.2 322 67.7
BcaB06g27542 Brassica carinata HOM05D004896 ORTHO05D006447 2.3e-113 412.9 307 67.8
CARHR261290 Cardamine hirsuta HOM05D004896 ORTHO05D006447 1.9e-112 409.8 296 68.9
Sabra16G0218900 Salix brachista HOM05D004896 ORTHO05D006447 2.5e-112 409.5 412 55.8
FvH4_6g52310 Fragaria vesca HOM05D004896 ORTHO05D006447 4.8e-111 405.2 250 77.2
Carub.0007s3482 Capsella rubella HOM05D004896 ORTHO05D006447 1.4e-110 403.7 325 64.6
AL7G49080 Arabidopsis lyrata HOM05D004896 ORTHO05D006447 2.4e-110 402.9 305 67.5
AT5G40660 Arabidopsis thaliana HOM05D004896 ORTHO05D006447 4.0e-110 402.1 291 70.1
HPP92_020467 Vanilla planifolia HOM05D004896 ORTHO05D006447 4.0e-110 402.1 326 63.8
Thhalv10027828m.g Eutrema salsugineum HOM05D004896 ORTHO05D006447 1.5e-109 400.2 331 62.2
Os07g0644000 Oryza sativa ssp. japonica HOM05D004896 ORTHO05D006447 2.2e-108 396.4 252 74.6
Zm00001eb329190 Zea mays HOM05D004896 ORTHO05D006447 3.8e-108 395.6 271 70.8
Sp7g01200 Schrenkiella parvula HOM05D004896 ORTHO05D006447 2.5e-107 392.9 324 62.7
Peaxi162Scf00420g00251 Petunia axillaris HOM05D004896 ORTHO05D006447 5.5e-107 391.7 338 62.4
Atru.chr6.2473 Acer truncatum HOM05D004896 ORTHO05D006447 1.6e-106 390.2 305 67.2
HPP92_026167 Vanilla planifolia HOM05D004896 ORTHO05D006447 2.7e-106 389.4 250 75.6
MELO3C014823.2 Cucumis melo HOM05D004896 ORTHO05D006447 6.0e-106 388.3 305 67.2
Aa31LG9G960 Aethionema arabicum HOM05D004896 ORTHO05D006447 3.9e-105 385.6 270 69.6
Oeu064389.1 Olea europaea HOM05D004896 ORTHO05D006447 2.5e-104 382.9 324 59.6
Sc03g0007130 Simmondsia chinensis HOM05D004896 ORTHO05D006447 1.4e-102 377.1 300 66.7
RcHm_v2.0_Chr2g0174241 Rosa chinensis HOM05D004896 ORTHO05D006447 1.5e-101 373.6 348 60.6
SHI03827 Sapria himalayana HOM05D004896 ORTHO05D006447 3.0e-97 359.4 320 57.2
FAN14G0298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 8.7e-97 357.8 348 58.0
SEGI_10618 Sequoiadendron giganteum HOM05D004896 ORTHO05D006447 1.4e-91 340.5 282 59.2
SGA_v2.0_scaffold18G08247 Striga asiatica HOM05D004896 ORTHO05D006447 8.8e-89 331.3 332 58.1
Atru.chr3.2666 Acer truncatum HOM05D004896 ORTHO05D006447 3.2e-83 312.8 232 70.3
Sed0012039 Sechium edule HOM05D004896 ORTHO05D006447 2.3e-81 306.6 260 63.8
Hma1.2p1_1484F.1_g286430 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 7.7e-77 291.6 205 74.6
Actinidia16947 Actinidia chinensis HOM05D004896 ORTHO05D006447 8.5e-76 288.1 211 74.4
Nitab4.5_0002158g0260 Nicotiana tabacum HOM05D002474 ORTHO05D007142 2.5e-67 260.0 211 65.4
MD17G1019600 Malus domestica HOM05D004896 ORTHO05D006447 1.5e-64 250.8 217 63.6
Pp3c2_19250 Physcomitrium patens HOM05D004896 ORTHO05D006447 2.4e-62 243.4 282 47.5
Mapoly0004s0068 Marchantia polymorpha HOM05D004896 ORTHO05D006447 8.5e-60 235.0 236 50.0
SMO200G0187 Selaginella moellendorffii HOM05D004896 ORTHO05D006447 1.1e-59 234.6 238 48.3
EL10Ac5g11826 Beta vulgaris HOM05D004896 ORTHO05D006447 3.2e-59 233.0 150 75.3
Atru.chr4.450 Acer truncatum HOM05D004896 ORTHO05D006447 2.0e-56 223.8 207 58.9
AagrBONN_evm.TU.Sc2ySwM_362.2811 Anthoceros agrestis HOM05D004896 ORTHO05D006447 9.8e-56 221.5 254 44.1
Hma1.2p1_1484F.1_g286403 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 9.8e-56 221.5 129 86.0
Hma1.2p1_1484F.1_g286440 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 9.8e-56 221.5 129 86.0
CBR_g4059 Chara braunii HOM05D004896 ORTHO05D006447 5.9e-53 212.2 247 44.5
Cc06_g20980 Coffea canephora HOM05D004896 ORTHO05D006447 1.0e-52 211.5 170 67.1
AUR62030692 Chenopodium quinoa HOM05D004896 ORTHO05D006447 2.1e-50 203.8 109 88.1
Duzib147G0160 Durio zibethinus HOM05D004896 ORTHO05D006447 2.8e-50 203.4 136 74.3
PRCOL_00001693 Prasinoderma coloniale HOM05D004896 ORTHO05D006447 6.6e-44 182.2 259 37.5
MCO13G572 Micromonas commoda HOM05D004896 ORTHO05D006447 5.2e-41 172.6 247 39.3
MBI19_g02443_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 1.5e-35 154.5 91 89.0
Glyma.19G080702 Glycine max HOM05D004896 ORTHO05D006447 6.2e-34 149.1 100 75.0
Cre17.g726250 Chlamydomonas reinhardtii HOM05D004896 ORTHO05D006447 2.4e-30 137.1 215 34.9
Atru.chr11.190 Acer truncatum HOM05D004896 ORTHO05D006447 3.2e-30 136.7 134 56.7
Atru.chr7.121 Acer truncatum HOM05D005216 ORTHO05D006453 1.7e-28 131.0 103 66.0
CDE12G0511 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 5.6e-27 125.9 105 61.9
Atru.chr2.3725 Acer truncatum HOM05D004896 ORTHO05D006447 3.4e-24 116.7 65 83.1
Atru.chr1.36 Acer truncatum HOM05D004896 ORTHO05D006447 1.3e-23 114.8 65 81.5
Atru.chr2.563 Acer truncatum HOM05D004866 ORTHO05D005716 2.9e-23 113.6 65 81.5
BcaC04g20647 Brassica carinata HOM05D004896 ORTHO05D006447 4.6e-21 106.3 96 60.4
C09p41080 Brassica napus HOM05D004896 ORTHO05D028223 6.0e-21 105.9 106 55.7
BolC9t56987H Brassica oleracea HOM05D004896 ORTHO05D028223 6.0e-21 105.9 106 55.7
BraA05t20477Z Brassica rapa HOM05D004896 ORTHO05D024046 1.5e-19 101.3 70 70.0
Atru.chr1.2050 Acer truncatum HOM05D004896 ORTHO05D006447 1.8e-17 94.4 79 63.3
Ah.07g205180 Amaranthus hybridus HOM05D004896 ORTHO05D060504 4.0e-17 93.2 154 39.6
BcaB01g05885 Brassica carinata HOM05D004896 ORTHO05D024046 6.9e-17 92.4 80 57.5
BolC7t42010H Brassica oleracea HOM05D004896 ORTHO05D028223 2.6e-16 90.5 52 80.8
A05p15620 Brassica napus HOM05D004896 ORTHO05D024046 4.4e-16 89.7 60 71.7
BcaC01g04583 Brassica carinata HOM05D004896 ORTHO05D006447 3.2e-14 83.6 47 83.0
Actinidia35788 Actinidia chinensis HOM05D004896 ORTHO05D006447 3.5e-13 80.1 160 39.4
TAR628G1566 Trochodendron aralioides HOM05D004896 ORTHO05D006447 2.8e-10 70.5 46 71.7
CSS0048304 Camellia sinensis var. sinensis HOM05D007623 ORTHO05D009641 8.4e-07 58.9 92 50.0


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