Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017951 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 0.0e+00 1199.1 650 100.0
CSS0029538 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 0.0e+00 1182.2 650 98.6
Actinidia20246 Actinidia chinensis HOM05D006438 ORTHO05D007998 5.4e-284 980.7 651 80.5
vmacro13165 Vaccinium macrocarpon HOM05D006438 ORTHO05D007998 3.3e-273 944.9 654 78.3
Dinv32596 Davidia involucrata HOM05D006438 ORTHO05D007998 5.2e-271 937.6 650 76.3
Rhsim07G0003900 Rhododendron simsii HOM05D006438 ORTHO05D007998 4.4e-270 934.5 655 79.7
Lj7A500T115 Lonicera japonica HOM05D006438 ORTHO05D007998 1.2e-262 909.8 658 73.4
CiPaw.02G041100 Carya illinoinensis HOM05D006438 ORTHO05D007998 3.0e-250 868.6 649 71.8
Cfa003796 Carpinus fangiana HOM05D006438 ORTHO05D007998 1.4e-247 859.8 651 73.4
GSVIVG01027157001 Vitis vinifera HOM05D006438 ORTHO05D007998 1.4e-244 849.7 651 73.7
QL06p050047 Quercus lobata HOM05D006438 ORTHO05D007998 3.5e-243 845.1 652 69.6
Manes.13G078900 Manihot esculenta HOM05D006438 ORTHO05D007998 5.1e-242 841.3 639 70.9
Haze_15664 Corylus avellana HOM05D006438 ORTHO05D007998 8.7e-242 840.5 651 71.9
QL11p022848 Quercus lobata HOM05D006438 ORTHO05D007998 1.9e-241 839.3 652 69.2
Prupe.2G189300 Prunus persica HOM05D006438 ORTHO05D007998 1.1e-239 833.6 649 69.2
DCAR_005393 Daucus carota HOM05D006438 ORTHO05D007998 9.0e-239 830.5 649 68.7
MSTRG.17348 Avicennia marina HOM05D006438 ORTHO05D007998 3.8e-237 825.1 661 67.5
Potri.002G171600 Populus trichocarpa HOM05D006438 ORTHO05D007998 9.4e-236 820.5 651 71.0
TWI59G0942 Tripterygium wilfordii HOM05D006438 ORTHO05D007998 9.4e-236 820.5 655 68.5
Ciclev10019221m.g Citrus clementina HOM05D006438 ORTHO05D007998 2.7e-235 818.9 661 70.7
Duzib138G1266 Durio zibethinus HOM05D006438 ORTHO05D007998 1.4e-234 816.6 673 68.1
Migut.B01878 Erythranthe guttata HOM05D006438 ORTHO05D007998 5.7e-233 811.2 664 66.6
Hund27192 Selenicereus undatus HOM05D006438 ORTHO05D007998 8.2e-232 807.4 672 66.8
Manes.13G077643 Manihot esculenta HOM05D006438 ORTHO05D007998 5.9e-230 801.2 639 68.4
Sc23g0002070 Simmondsia chinensis HOM05D006438 ORTHO05D007998 5.9e-230 801.2 675 66.5
PGSC0003DMG400000230 Solanum tuberosum HOM05D006438 ORTHO05D007998 5.9e-230 801.2 671 65.4
Sabra14G0072800 Salix brachista HOM05D006438 ORTHO05D007998 1.4e-228 796.6 658 68.2
Glyma.03G257800 Glycine max HOM05D006438 ORTHO05D007998 7.2e-228 794.3 645 67.8
Sopen01g039750 Solanum pennellii HOM05D006438 ORTHO05D007998 2.1e-227 792.7 671 65.1
Thecc.01G341800 Theobroma cacao HOM05D006438 ORTHO05D007998 2.1e-227 792.7 678 66.2
Solyc01g096030.4 Solanum lycopersicum HOM05D006438 ORTHO05D007998 7.9e-227 790.8 671 65.3
Glyma.19G256300 Glycine max HOM05D006438 ORTHO05D007998 1.8e-226 789.6 645 67.6
Nitab4.5_0013402g0010 Nicotiana tabacum HOM05D006438 ORTHO05D007998 3.9e-226 788.5 671 65.3
FAN03G1123 Fragaria x ananassa HOM05D006438 ORTHO05D007998 5.1e-226 788.1 652 66.6
Gohir.A08G125100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 1.5e-225 786.6 673 66.1
FvH4_7g16650 Fragaria vesca HOM05D006438 ORTHO05D007998 4.4e-225 785.0 654 66.2
FAN10G0107 Fragaria x ananassa HOM05D006438 ORTHO05D007998 4.4e-225 785.0 654 65.9
Phvul.006G113600 Phaseolus vulgaris HOM05D006438 ORTHO05D007998 5.7e-225 784.6 643 66.4
Peaxi162Scf00786g00012 Petunia axillaris HOM05D006438 ORTHO05D007998 7.4e-225 784.3 671 64.5
CAN.G1415.26 Capsicum annuum HOM05D006438 ORTHO05D007998 4.8e-224 781.6 669 64.7
SalBow3G2635 Salvia bowleyana HOM05D006438 ORTHO05D007998 2.4e-223 779.2 659 64.8
FAN10G3447 Fragaria x ananassa HOM05D006438 ORTHO05D007998 7.0e-223 777.7 652 65.6
MD07G1150500 Malus domestica HOM05D006438 ORTHO05D007998 1.5e-222 776.5 649 65.0
Nitab4.5_0000172g0480 Nicotiana tabacum HOM05D006438 ORTHO05D007998 2.0e-222 776.2 671 64.2
RcHm_v2.0_Chr1g0359811 Rosa chinensis HOM05D006438 ORTHO05D007998 2.6e-222 775.8 665 65.3
Gorai.004G151600 Gossypium raimondii HOM05D006438 ORTHO05D007998 3.8e-221 771.9 664 66.3
Gohir.D08G146100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 5.0e-221 771.5 664 66.0
SGA_v2.0_scaffold5G03022 Striga asiatica HOM05D006438 ORTHO05D007998 1.4e-220 770.0 659 63.7
Lalb_Chr18g0044491 Lupinus albus HOM05D006438 ORTHO05D007998 9.4e-220 767.3 658 65.5
VMungo0540G1767 Vigna mungo HOM05D006438 ORTHO05D007998 8.0e-219 764.2 644 64.0
Cpa.g.sc96.25 Carica papaya HOM05D006438 ORTHO05D007998 1.4e-218 763.5 654 65.4
Lj1g0004073 Lotus japonicus HOM05D006438 ORTHO05D007998 1.4e-218 763.5 657 65.3
Nn1g00253 Nelumbo nucifera HOM05D006438 ORTHO05D007998 1.4e-218 763.5 640 67.0
Nn3g18981 Nelumbo nucifera HOM05D006438 ORTHO05D007998 2.3e-218 762.7 649 65.0
EL10Ac1g00261 Beta vulgaris HOM05D006438 ORTHO05D007998 2.0e-217 759.6 672 63.2
Ah.05g179490 Amaranthus hybridus HOM05D006438 ORTHO05D007998 6.3e-216 754.6 671 65.3
CANSAT56G2224 Cannabis sativa HOM05D006438 ORTHO05D007998 2.4e-215 752.7 655 63.7
AUR62023453 Chenopodium quinoa HOM05D006438 ORTHO05D007998 2.4e-215 752.7 671 62.3
MD01G1082100 Malus domestica HOM05D006438 ORTHO05D007998 3.1e-215 752.3 655 63.4
Ca_09510_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 5.9e-214 748.0 658 64.1
Ca_30059_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 5.9e-214 748.0 658 64.1
FAN01G1234 Fragaria x ananassa HOM05D006438 ORTHO05D007998 8.5e-213 744.2 652 63.7
ClCG06G001260 Citrullus lanatus HOM05D006438 ORTHO05D007998 1.9e-212 743.0 653 65.1
PSO170G3726 Papaver somniferum HOM05D006438 ORTHO05D007998 3.2e-212 742.3 641 62.7
Eucgr.A01924 Eucalyptus grandis HOM05D006438 ORTHO05D007998 1.2e-209 733.8 652 62.3
Actinidia10144 Actinidia chinensis HOM05D006438 ORTHO05D007998 1.3e-208 730.3 470 82.3
HanXRQChr04g0120541 Helianthus annuus HOM05D006438 ORTHO05D007998 1.3e-208 730.3 651 65.7
PSO063G1116 Papaver somniferum HOM05D006438 ORTHO05D007998 4.8e-208 728.4 643 62.4
PGR031G2090 Punica granatum HOM05D006438 ORTHO05D007998 1.8e-207 726.5 652 64.7
MELO3C022408.2 Cucumis melo HOM05D006438 ORTHO05D007998 2.4e-207 726.1 653 64.8
ECA236G2598 Erigeron canadensis HOM05D006438 ORTHO05D007998 4.5e-206 721.8 652 62.7
Potri.014G099300 Populus trichocarpa HOM05D006438 ORTHO05D007998 5.9e-206 721.5 578 69.0
TPR.G4682 Trifolium pratense HOM05D006438 ORTHO05D007998 5.0e-205 718.4 632 63.1
COL.COLO4_06280 Corchorus olitorius HOM05D006438 ORTHO05D007998 1.9e-204 716.5 602 66.4
THA.LOC104817364 Tarenaya hassleriana HOM05D006438 ORTHO05D007998 7.2e-204 714.5 669 61.3
CsaV3_6G007190 Cucumis sativus L. HOM05D006438 ORTHO05D007998 1.6e-203 713.4 653 63.9
arahy.Tifrunner.gnm1.ann1.TZA1ET Arachis hypogaea HOM05D006438 ORTHO05D007998 3.0e-202 709.1 649 61.9
arahy.Tifrunner.gnm1.ann1.QN4XTT Arachis hypogaea HOM05D006438 ORTHO05D007998 4.0e-202 708.8 655 62.0
Sed0005284 Sechium edule HOM05D006438 ORTHO05D007998 2.8e-200 702.6 643 63.6
Psat3g002440 Pisum sativum HOM05D006438 ORTHO05D007998 3.7e-200 702.2 664 60.7
Medtr7g117420 Medicago truncatula HOM05D006438 ORTHO05D007998 4.8e-200 701.8 632 64.2
MBI07_g40678_MAGBIO Magnolia biondii HOM05D006438 ORTHO05D007998 2.0e-193 679.9 661 57.9
Aqoxy5G04279 Aquilegia oxysepala HOM05D006438 ORTHO05D007998 4.4e-193 678.7 652 58.7
Lsat_1_v5_gn_7_1020 Lactuca sativa HOM05D006438 ORTHO05D007998 7.0e-191 671.4 667 60.4
Aa31LG10G15790 Aethionema arabicum HOM05D006438 ORTHO05D007998 1.2e-190 670.6 653 58.0
AUR62004500 Chenopodium quinoa HOM05D006438 ORTHO05D007998 2.0e-190 669.8 657 58.4
AL5G44360 Arabidopsis lyrata HOM05D006438 ORTHO05D007998 1.1e-188 664.1 685 56.9
Thhalv10005821m.g Eutrema salsugineum HOM05D006438 ORTHO05D007998 2.6e-185 652.9 675 55.4
Sp5g01570 Schrenkiella parvula HOM05D006438 ORTHO05D007998 6.4e-184 648.3 683 55.1
AT3G61800 Arabidopsis thaliana HOM05D006438 ORTHO05D007998 4.1e-183 645.6 684 55.3
Carub.0005s2854 Capsella rubella HOM05D006438 ORTHO05D007998 7.0e-183 644.8 683 54.5
ATR0602G124 Amborella trichopoda HOM05D006438 ORTHO05D007998 6.0e-182 641.7 664 55.9
CARHR172130 Cardamine hirsuta HOM05D006438 ORTHO05D007998 6.8e-178 628.2 689 54.0
BolC6t37959H Brassica oleracea HOM05D006438 ORTHO05D007998 2.6e-177 626.3 678 54.6
BraA07t30216Z Brassica rapa HOM05D006438 ORTHO05D007998 8.3e-176 621.3 682 54.3
C06p27980 Brassica napus HOM05D006438 ORTHO05D007998 1.9e-175 620.2 678 53.8
A07p25760 Brassica napus HOM05D006438 ORTHO05D007998 1.6e-174 617.1 682 53.8
HPP92_008818 Vanilla planifolia HOM05D006438 ORTHO05D007998 4.6e-174 615.5 685 52.7
unitig_37.g12626 Utricularia gibba HOM05D006438 ORTHO05D007998 2.8e-171 606.3 622 56.8
Dinv35119 Davidia involucrata HOM05D006438 ORTHO05D007998 2.4e-151 540.0 652 52.1
SEGI_11798 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 3.0e-133 479.9 684 44.3
Cc10_g13840 Coffea canephora HOM05D006438 ORTHO05D007998 1.5e-132 477.6 373 74.0
BcaC08g45166 Brassica carinata HOM05D006438 ORTHO05D007998 6.5e-128 462.2 560 49.5
Mapoly0002s0048 Marchantia polymorpha HOM05D006438 ORTHO05D007998 5.5e-127 459.1 674 42.6
Zm00001eb378420 Zea mays HOM05D006438 ORTHO05D007998 1.8e-125 454.1 626 46.0
Pp3c3_31410 Physcomitrium patens HOM05D006438 ORTHO05D007998 3.1e-122 443.4 686 40.7
Atru.chr5.676 Acer truncatum HOM05D006438 ORTHO05D007998 1.4e-114 417.9 310 74.2
SMO365G0083 Selaginella moellendorffii HOM05D006438 ORTHO05D007998 5.1e-109 399.4 642 39.7
BcaC08g45168 Brassica carinata HOM05D006438 ORTHO05D007998 1.4e-101 374.8 320 64.1
CDE08G0794 Ceratophyllum demersum HOM05D006438 ORTHO05D007998 1.8e-98 364.4 333 59.2
SHI13317 Sapria himalayana HOM05D006438 ORTHO05D007998 2.2e-96 357.5 336 59.5
Atru.chr5.675 Acer truncatum HOM05D006438 ORTHO05D007998 1.7e-88 331.3 244 70.9
AagrBONN_evm.TU.Sc2ySwM_368.299 Anthoceros agrestis HOM05D006438 ORTHO05D007998 3.7e-75 287.0 598 33.1
BcaC08g45167 Brassica carinata HOM05D006438 ORTHO05D007998 1.4e-58 231.9 245 55.1
C08p42400 Brassica napus HOM05D006438 ORTHO05D007998 1.1e-45 189.1 321 42.4
BraA06t25827Z Brassica rapa HOM05D006438 ORTHO05D007998 2.9e-43 181.0 261 46.4
SEGI_17110 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 1.0e-40 172.6 224 45.1
Sabra02G0141200 Salix brachista HOM05D006438 ORTHO05D007998 2.1e-30 138.3 356 31.5
SEGI_37113 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 7.1e-18 96.7 178 34.3
Zm00001eb167390 Zea mays HOM05D006438 ORTHO05D007998 5.7e-15 87.0 90 54.4
Aa31sc496G10 Aethionema arabicum HOM05D006438 ORTHO05D007998 1.5e-12 79.0 120 42.5


User provided reference genes

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