Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017868 Camellia sinensis var. sinensis HOM05D004989 ORTHO05D006335 4.1e-212 741.1 368 100.0
CSS0000312 Camellia sinensis var. sinensis HOM05D004989 ORTHO05D006335 4.9e-173 611.3 357 86.8
Dinv38405 Davidia involucrata HOM05D004989 ORTHO05D006335 1.2e-166 590.1 355 84.8
vmacro15315 Vaccinium macrocarpon HOM05D004989 ORTHO05D006335 2.2e-165 585.9 358 84.4
Dinv44490 Davidia involucrata HOM05D004989 ORTHO05D006335 4.3e-161 571.6 356 81.7
Rhsim02G0020900 Rhododendron simsii HOM05D004989 ORTHO05D006335 2.1e-160 569.3 403 74.2
MD16G1186000 Malus domestica HOM05D004989 ORTHO05D006335 3.1e-159 565.5 362 79.8
CiPaw.02G093300 Carya illinoinensis HOM05D004989 ORTHO05D006335 4.0e-159 565.1 358 79.3
Cfa015597 Carpinus fangiana HOM05D004989 ORTHO05D006335 1.2e-158 563.5 363 78.8
Peaxi162Scf00134g02033 Petunia axillaris HOM05D004989 ORTHO05D006335 6.4e-157 557.8 355 79.4
GSVIVG01017902001 Vitis vinifera HOM05D004989 ORTHO05D006335 2.4e-156 555.8 358 80.4
Prupe.1G152800 Prunus persica HOM05D004989 ORTHO05D006335 1.2e-155 553.5 359 79.1
TAR365G0616 Trochodendron aralioides HOM05D004989 ORTHO05D006335 3.0e-154 548.9 363 77.7
QL06p003872 Quercus lobata HOM05D004989 ORTHO05D006335 1.1e-153 547.0 375 75.5
CANSAT78G0752 Cannabis sativa HOM05D004989 ORTHO05D006335 7.3e-153 544.3 369 75.9
RcHm_v2.0_Chr4g0417841 Rosa chinensis HOM05D004989 ORTHO05D006335 7.3e-153 544.3 367 76.6
CAN.G69.27 Capsicum annuum HOM05D004989 ORTHO05D006335 2.4e-151 539.3 321 82.6
VMungo1215G0587 Vigna mungo HOM05D004989 ORTHO05D006335 6.9e-151 537.7 362 75.4
Cc03_g03230 Coffea canephora HOM05D004989 ORTHO05D006335 1.5e-150 536.6 360 74.7
HanXRQChr12g0359311 Helianthus annuus HOM05D004989 ORTHO05D006335 3.4e-150 535.4 359 76.6
Lj6g0002948 Lotus japonicus HOM05D004989 ORTHO05D006335 3.4e-150 535.4 364 74.7
FvH4_4g14760 Fragaria vesca HOM05D004989 ORTHO05D006335 9.9e-150 533.9 367 75.7
Glyma.07G257800 Glycine max HOM05D004989 ORTHO05D006335 9.9e-150 533.9 361 75.3
ECA234G2869 Erigeron canadensis HOM05D004989 ORTHO05D006335 1.3e-149 533.5 327 81.0
Potri.008G203600 Populus trichocarpa HOM05D004989 ORTHO05D006335 8.4e-149 530.8 350 78.3
Solyc01g079860.3 Solanum lycopersicum HOM05D004989 ORTHO05D006335 1.1e-148 530.4 321 81.6
Sopen01g031620 Solanum pennellii HOM05D004989 ORTHO05D006335 1.1e-148 530.4 321 81.3
MSTRG.4001 Avicennia marina HOM05D004989 ORTHO05D006335 2.4e-148 529.3 358 76.5
arahy.Tifrunner.gnm1.ann1.L7AGGG Arachis hypogaea HOM05D004989 ORTHO05D006335 3.2e-148 528.9 370 74.1
Thecc.04G224100 Theobroma cacao HOM05D004989 ORTHO05D006335 4.2e-148 528.5 364 73.9
Sed0017941 Sechium edule HOM05D004989 ORTHO05D006335 1.2e-147 526.9 357 74.8
EL10Ac3g05973 Beta vulgaris HOM05D004989 ORTHO05D006335 1.6e-147 526.6 352 73.6
Aqoxy3G00936 Aquilegia oxysepala HOM05D004989 ORTHO05D006335 2.7e-147 525.8 357 75.4
arahy.Tifrunner.gnm1.ann1.8A1ZYN Arachis hypogaea HOM05D004989 ORTHO05D006335 2.7e-147 525.8 370 73.8
Nn1g02182 Nelumbo nucifera HOM05D004989 ORTHO05D006335 2.7e-147 525.8 362 73.2
Lalb_Chr18g0056141 Lupinus albus HOM05D004989 ORTHO05D006335 3.5e-147 525.4 369 73.2
Glyma.17G016200 Glycine max HOM05D004989 ORTHO05D006335 4.6e-147 525.0 359 75.2
Manes.03G183100 Manihot esculenta HOM05D004989 ORTHO05D006335 1.7e-146 523.1 357 75.1
Medtr2g022530 Medicago truncatula HOM05D004989 ORTHO05D006335 1.7e-146 523.1 362 74.0
SalBow2G0224 Salvia bowleyana HOM05D004989 ORTHO05D006335 3.0e-146 522.3 370 73.8
MELO3C006557.2 Cucumis melo HOM05D004989 ORTHO05D006335 4.3e-145 518.5 357 73.4
Ca_00634_v3 Cicer arietinum L. HOM05D004989 ORTHO05D006335 7.3e-145 517.7 368 72.8
CsaV3_3G013610 Cucumis sativus L. HOM05D004989 ORTHO05D006335 1.3e-144 516.9 357 73.7
FAN17G0130 Fragaria x ananassa HOM05D004989 ORTHO05D006335 1.6e-144 516.5 386 71.2
MSTRG.10011 Avicennia marina HOM05D004989 ORTHO05D006335 6.2e-144 514.6 318 81.1
Migut.G00301 Erythranthe guttata HOM05D004989 ORTHO05D006335 6.2e-144 514.6 373 72.9
PSO017G3853 Papaver somniferum HOM05D004989 ORTHO05D006335 6.2e-144 514.6 363 73.8
CARHR193800 Cardamine hirsuta HOM05D004989 ORTHO05D006335 8.1e-144 514.2 353 73.9
COL.COLO4_26626 Corchorus olitorius HOM05D004989 ORTHO05D006335 8.1e-144 514.2 407 65.4
Atru.chr4.2544 Acer truncatum HOM05D004989 ORTHO05D006335 1.1e-143 513.8 326 80.4
MBI14_g28267_MAGBIO Magnolia biondii HOM05D004989 ORTHO05D006335 1.8e-143 513.1 354 75.1
Nitab4.5_0005927g0020 Nicotiana tabacum HOM05D004989 ORTHO05D006335 3.1e-143 512.3 380 71.8
Carub.0006s1748 Capsella rubella HOM05D004989 ORTHO05D006335 6.9e-143 511.1 353 73.1
Aa31LG11G10490 Aethionema arabicum HOM05D004989 ORTHO05D006335 1.5e-142 510.0 352 73.3
BolC3t13560H Brassica oleracea HOM05D004989 ORTHO05D006335 1.5e-142 510.0 366 70.2
AL6G30570 Arabidopsis lyrata HOM05D004989 ORTHO05D006335 2.6e-142 509.2 353 72.8
THA.LOC104818802 Tarenaya hassleriana HOM05D004989 ORTHO05D006335 3.4e-142 508.8 360 70.8
Thhalv10013830m.g Eutrema salsugineum HOM05D004989 ORTHO05D006335 1.3e-141 506.9 353 72.2
Eucgr.B01122 Eucalyptus grandis HOM05D004989 ORTHO05D006335 1.7e-141 506.5 360 71.7
Phvul.003G091700 Phaseolus vulgaris HOM05D004989 ORTHO05D006335 1.7e-141 506.5 319 78.4
BcaB01g05136 Brassica carinata HOM05D004989 ORTHO05D006335 3.8e-141 505.4 366 69.7
AUR62026218 Chenopodium quinoa HOM05D004989 ORTHO05D006335 3.8e-141 505.4 343 73.5
Sp6g25210 Schrenkiella parvula HOM05D004989 ORTHO05D006335 4.9e-141 505.0 353 71.7
AT5G19150 Arabidopsis thaliana HOM05D004989 ORTHO05D006335 1.4e-140 503.4 361 71.7
BcaB01g04874 Brassica carinata HOM05D004989 ORTHO05D006335 1.4e-140 503.4 353 72.0
RcHm_v2.0_Chr0c32g0501661 Rosa chinensis HOM05D004989 ORTHO05D006335 1.4e-140 503.4 355 75.2
PGSC0003DMG400009024 Solanum tuberosum HOM05D004989 ORTHO05D006335 1.4e-140 503.4 292 84.9
Gorai.005G041000 Gossypium raimondii HOM05D004989 ORTHO05D006335 1.9e-140 503.1 360 72.2
Gohir.D02G037100 Gossypium hirsutum HOM05D004989 ORTHO05D006335 7.1e-140 501.1 360 71.9
Sabra08G0157900 Salix brachista HOM05D004989 ORTHO05D006335 7.1e-140 501.1 386 69.7
Actinidia36991 Actinidia chinensis HOM05D004989 ORTHO05D006335 1.6e-139 500.0 348 75.0
Gohir.A02G029300 Gossypium hirsutum HOM05D004989 ORTHO05D006335 1.6e-139 500.0 360 71.9
BraA03t10257Z Brassica rapa HOM05D004989 ORTHO05D006335 2.7e-139 499.2 366 69.4
CDE07G1289 Ceratophyllum demersum HOM05D004989 ORTHO05D006335 4.6e-139 498.4 358 71.2
FAN22G1009 Fragaria x ananassa HOM05D004989 ORTHO05D006335 3.9e-138 495.4 384 69.3
C03p10950 Brassica napus HOM05D004989 ORTHO05D006335 6.7e-138 494.6 375 66.7
Nitab4.5_0000630g0050 Nicotiana tabacum HOM05D004989 ORTHO05D006335 8.7e-138 494.2 290 84.5
A03p09380 Brassica napus HOM05D004989 ORTHO05D006335 1.1e-137 493.8 344 72.7
RcHm_v2.0_Chr0c32g0501471 Rosa chinensis HOM05D004989 ORTHO05D006335 2.5e-137 492.7 364 71.4
Ah.07g202120 Amaranthus hybridus HOM05D004989 ORTHO05D006335 4.3e-137 491.9 352 70.5
Hund12013 Selenicereus undatus HOM05D004989 ORTHO05D006335 5.6e-137 491.5 319 73.7
Oeu042787.2 Olea europaea HOM05D004989 ORTHO05D006335 9.6e-137 490.7 426 63.4
unitig_736.g22488 Utricularia gibba HOM05D004989 ORTHO05D006335 4.8e-136 488.4 364 69.2
PSO478G2898 Papaver somniferum HOM05D004989 ORTHO05D006335 6.2e-136 488.0 312 78.5
HPP92_005520 Vanilla planifolia HOM05D004989 ORTHO05D006335 1.4e-135 486.9 361 70.6
BraA02t05485Z Brassica rapa HOM05D004989 ORTHO05D006335 1.8e-135 486.5 320 75.3
Haze_00947 Corylus avellana HOM05D004989 ORTHO05D006335 6.9e-135 484.6 355 71.5
ATR0743G104 Amborella trichopoda HOM05D004989 ORTHO05D006335 3.4e-134 482.3 349 69.6
C03p10960 Brassica napus HOM05D004989 ORTHO05D006335 7.6e-134 481.1 352 68.8
BcaC03g13646 Brassica carinata HOM05D004989 ORTHO05D006335 2.2e-133 479.6 320 74.4
BolC2t06940H Brassica oleracea HOM05D004989 ORTHO05D006335 2.2e-133 479.6 320 74.4
BcaB05g23373 Brassica carinata HOM05D004989 ORTHO05D006335 2.9e-133 479.2 320 74.7
TWI73G0966 Tripterygium wilfordii HOM05D004989 ORTHO05D006335 3.8e-133 478.8 366 68.6
Zm00001eb168810 Zea mays HOM05D004989 ORTHO05D006335 3.5e-131 472.2 326 71.5
RcHm_v2.0_Chr3g0483801 Rosa chinensis HOM05D004989 ORTHO05D006335 4.6e-131 471.9 283 84.1
Os11g0276300 Oryza sativa ssp. japonica HOM05D004989 ORTHO05D006335 6.0e-131 471.5 319 72.7
A02p05270 Brassica napus HOM05D004989 ORTHO05D006335 5.1e-130 468.4 307 75.6
Ciclev10005119m.g Citrus clementina HOM05D004989 ORTHO05D006335 5.1e-130 468.4 299 78.3
Sc13g0004100 Simmondsia chinensis HOM05D004989 ORTHO05D006335 2.5e-129 466.1 306 76.5
C02p10390 Brassica napus HOM05D004989 ORTHO05D006335 1.3e-128 463.8 310 74.5
Lj6g0017812 Lotus japonicus HOM05D004989 ORTHO05D006335 6.2e-128 461.5 321 72.9
Hma1.2p1_2553F.1_g324330 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 2.5e-124 449.5 256 88.3
Lj6A574T37 Lonicera japonica HOM05D004989 ORTHO05D006335 1.6e-120 436.8 245 87.3
Psat1g182800 Pisum sativum HOM05D004989 ORTHO05D006335 1.1e-119 434.1 262 82.4
C03p10910 Brassica napus HOM05D004989 ORTHO05D006335 3.0e-106 389.4 258 74.4
Mapoly0063s0079 Marchantia polymorpha HOM05D004989 ORTHO05D006335 1.7e-104 383.6 320 59.4
PGR142G2933 Punica granatum HOM05D004989 ORTHO05D006335 2.8e-104 382.9 363 58.1
SMO361G0104 Selaginella moellendorffii HOM05D004989 ORTHO05D006335 1.2e-102 377.5 306 62.1
C03p10860 Brassica napus HOM05D004989 ORTHO05D006335 5.0e-101 372.1 347 58.8
Duzib151G0886 Durio zibethinus HOM05D004989 ORTHO05D006335 7.2e-100 368.2 363 56.2
CBR_g26053 Chara braunii HOM05D004989 ORTHO05D006335 9.4e-100 367.9 337 55.2
ClCG05G005360 Citrullus lanatus HOM05D004989 ORTHO05D006335 3.9e-98 362.5 244 74.2
SHI00391 Sapria himalayana HOM05D004989 ORTHO05D006335 3.9e-98 362.5 294 65.0
BcaB01g05294 Brassica carinata HOM05D004989 ORTHO05D006335 5.7e-97 358.6 360 56.1
HPP92_005588 Vanilla planifolia HOM05D004989 ORTHO05D006335 3.7e-96 355.9 294 65.3
SGA_v2.0_scaffold39G15320 Striga asiatica HOM05D004989 ORTHO05D006335 2.7e-91 339.7 197 85.8
Pp3c8_1650 Physcomitrium patens HOM05D004989 ORTHO05D006335 1.2e-86 324.3 284 58.8
AagrBONN_evm.TU.Sc2ySwM_344.1251 Anthoceros agrestis HOM05D004989 ORTHO05D006335 2.9e-85 319.7 323 52.3
FAN07G2774 Fragaria x ananassa HOM05D004989 ORTHO05D006335 7.2e-84 315.1 274 62.8
arahy.Tifrunner.gnm1.ann1.BS3LH0 Arachis hypogaea HOM05D004989 ORTHO05D006335 2.3e-82 310.1 370 49.7
Hma1.2p1_2553F.1_g324320 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 5.7e-81 305.4 199 79.9
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 1.2e-75 287.7 177 80.2
arahy.Tifrunner.gnm1.ann1.J5ZRE9 Arachis hypogaea HOM05D004989 ORTHO05D006335 1.2e-73 281.2 190 73.2
arahy.Tifrunner.gnm1.ann1.HR1U72 Arachis hypogaea HOM05D004989 ORTHO05D006335 5.4e-71 272.3 189 72.5
Cre06.g250500 Chlamydomonas reinhardtii HOM05D004989 ORTHO05D006335 1.9e-68 263.8 334 40.7
Ca_00654_v3 Cicer arietinum L. HOM05D004989 ORTHO05D006335 9.5e-68 261.5 199 71.9
Cpa.g.sc147.7 Carica papaya HOM05D004989 ORTHO05D006335 7.0e-63 245.4 181 69.6
SEGI_35556 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 3.5e-62 243.0 200 64.0
TPR.G30683 Trifolium pratense HOM05D004989 ORTHO05D006335 4.6e-62 242.7 165 75.2
Hma1.2p1_0995F.1_g245810 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 6.6e-61 238.8 170 75.3
MCO05G313 Micromonas commoda HOM05D004989 ORTHO05D006335 6.6e-61 238.8 342 39.8
PRCOL_00001617 Prasinoderma coloniale HOM05D004989 ORTHO05D006335 7.5e-57 225.3 355 39.4
Hund03167 Selenicereus undatus HOM05D004989 ORTHO05D006335 2.8e-51 206.8 121 79.3
Cfa024379 Carpinus fangiana HOM05D004989 ORTHO05D006335 1.8e-50 204.1 286 39.2
Atru.chr4.2545 Acer truncatum HOM05D004989 ORTHO05D006335 8.9e-50 201.8 164 64.6
SEGI_27897 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 3.4e-49 199.9 125 76.8
Haze_26760 Corylus avellana HOM05D004980 ORTHO05D006505 6.4e-48 195.7 257 42.0
SEGI_07547 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 6.4e-48 195.7 126 73.8
Cre05.g234664 Chlamydomonas reinhardtii HOM05D004989 ORTHO05D006335 2.7e-46 190.3 367 34.9
Actinidia08511 Actinidia chinensis HOM05D004989 ORTHO05D006335 1.1e-39 168.3 321 38.0
SEGI_12399 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 3.5e-38 163.3 129 65.1
Atru.chr4.2547 Acer truncatum HOM05D004989 ORTHO05D000586 4.7e-35 152.9 121 62.0
Cfa015379 Carpinus fangiana HOM05D000407 ORTHO05D002981 6.4e-32 142.5 164 53.7
Cpa.g.sc147.5 Carica papaya HOM05D004989 ORTHO05D006335 2.3e-29 134.0 95 70.5
Cpa.g.sc147.6 Carica papaya HOM05D004989 ORTHO05D006335 8.1e-27 125.6 69 84.1
TPR.G30666 Trifolium pratense HOM05D004989 ORTHO05D006335 2.4e-26 124.0 87 70.1
CBR_g19747 Chara braunii HOM05D000409 ORTHO05D000184 4.3e-20 103.2 87 58.6
AUR62026378 Chenopodium quinoa HOM05D004989 ORTHO05D006335 3.1e-18 97.1 72 62.5
FAN07G1160 Fragaria x ananassa HOM05D004989 ORTHO05D006335 8.2e-11 72.4 45 75.6


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