Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017864 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000378 1.2e-29 132.5 67 100.0
CSS0017121 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000378 3.1e-17 91.3 66 71.2
CSS0025611 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.5e-16 89.0 66 69.7
CSS0026872 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.5e-16 89.0 66 69.7
CSS0035253 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.5e-16 89.0 66 69.7
CSS0045803 Camellia sinensis var. sinensis HOM05D000691 ORTHO05D000378 9.9e-16 86.3 66 68.2
CSS0004285 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.9e-15 84.0 63 68.3
CSS0026792 Camellia sinensis var. sinensis HOM05D000691 ORTHO05D000378 6.4e-15 83.6 66 65.2
QL01p005990 Quercus lobata HOM05D000004 ORTHO05D000002 2.8e-10 68.2 66 54.5
QL04p041450 Quercus lobata HOM05D000004 ORTHO05D000002 2.8e-10 68.2 66 54.5
QL05p055474 Quercus lobata HOM05D000004 ORTHO05D000002 2.8e-10 68.2 66 54.5
QL93p1800_0008 Quercus lobata HOM05D000004 ORTHO05D000002 2.8e-10 68.2 66 54.5
QL05p016549 Quercus lobata HOM05D000004 ORTHO05D000002 6.2e-10 67.0 66 54.5
Lj4P131T15 Lonicera japonica HOM05D000691 ORTHO05D000378 1.2e-08 62.8 65 49.2
Lj2C116T7 Lonicera japonica HOM05D000691 ORTHO05D000378 2.2e-07 58.5 65 47.7
Sopen09g025530 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-07 58.5 58 48.3
Sopen11g022600 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-07 58.5 58 48.3
Sopen12g017890 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-07 58.5 58 48.3
Sopen07g017800 Solanum pennellii HOM05D000004 ORTHO05D000002 2.9e-07 58.2 58 48.3
Lj3C273T2 Lonicera japonica HOM05D000691 ORTHO05D000378 4.9e-07 57.4 62 46.8
Lj4C714G8 Lonicera japonica HOM05D000691 ORTHO05D000378 4.9e-07 57.4 65 46.2
Sopen00g002900 Solanum pennellii HOM05D000004 ORTHO05D000002 4.9e-07 57.4 58 48.3
Sopen02g010330 Solanum pennellii HOM05D000004 ORTHO05D000002 4.9e-07 57.4 58 48.3
Sopen02g012390 Solanum pennellii HOM05D000004 ORTHO05D000002 4.9e-07 57.4 58 48.3
Sopen03g033370 Solanum pennellii HOM05D000004 ORTHO05D000002 4.9e-07 57.4 58 48.3
Sopen04g014160 Solanum pennellii HOM05D000004 ORTHO05D000002 4.9e-07 57.4 58 48.3
Sopen05g012140 Solanum pennellii HOM05D000004 ORTHO05D000002 4.9e-07 57.4 58 48.3
Sopen05g026540 Solanum pennellii HOM05D000004 ORTHO05D000002 4.9e-07 57.4 58 48.3
Sopen05g028570 Solanum pennellii HOM05D000004 ORTHO05D000002 4.9e-07 57.4 58 48.3
Sopen06g010510 Solanum pennellii HOM05D000004 ORTHO05D000002 4.9e-07 57.4 58 48.3
Sopen07g011130 Solanum pennellii HOM05D000004 ORTHO05D000002 4.9e-07 57.4 58 48.3
Sopen07g025250 Solanum pennellii HOM05D000004 ORTHO05D000002 4.9e-07 57.4 58 48.3
Sopen08g019200 Solanum pennellii HOM05D000004 ORTHO05D000002 4.9e-07 57.4 58 48.3
Sopen09g023470 Solanum pennellii HOM05D000004 ORTHO05D000002 4.9e-07 57.4 58 48.3
Sopen10g005990 Solanum pennellii HOM05D000004 ORTHO05D000002 4.9e-07 57.4 58 48.3
Sopen11g013950 Solanum pennellii HOM05D000004 ORTHO05D000002 4.9e-07 57.4 58 48.3
Sopen12g024530 Solanum pennellii HOM05D000004 ORTHO05D000002 4.9e-07 57.4 58 48.3
Sopen04g014770 Solanum pennellii HOM05D000004 ORTHO05D000002 6.5e-07 57.0 58 46.6
CSS0000763 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.4e-07 56.6 64 43.8
AUR62013145 Chenopodium quinoa HOM05D001385 ORTHO05D000378 8.4e-07 56.6 58 41.4
CSS0024510 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.4e-06 55.8 61 44.3
CSS0040213 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.4e-06 55.8 64 43.8
Sopen04g020730 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-06 55.8 58 48.3
Sopen05g021280 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-06 55.8 58 44.8
Sopen07g016960 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-06 55.8 58 46.6
Sopen08g015530 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-06 55.8 58 46.6
AUR62039452 Chenopodium quinoa HOM05D000691 ORTHO05D000378 2.5e-06 55.1 58 39.7
Sopen01g023070 Solanum pennellii HOM05D000004 ORTHO05D000002 2.5e-06 55.1 58 46.6
Sopen05g023350 Solanum pennellii HOM05D000004 ORTHO05D000002 3.2e-06 54.7 58 44.8
AUR62014576 Chenopodium quinoa HOM05D000004 ORTHO05D000378 4.2e-06 54.3 58 41.4
Sopen01g013630 Solanum pennellii HOM05D000004 ORTHO05D000002 4.2e-06 54.3 58 46.6
AUR62006162 Chenopodium quinoa HOM05D000394 ORTHO05D000299 7.1e-06 53.5 58 39.7
AUR62010243 Chenopodium quinoa HOM05D000187 ORTHO05D000378 7.1e-06 53.5 58 39.7
AUR62011365 Chenopodium quinoa HOM05D000021 ORTHO05D000010 7.1e-06 53.5 58 39.7
AUR62015945 Chenopodium quinoa HOM05D000252 ORTHO05D000378 7.1e-06 53.5 58 39.7
AUR62028639 Chenopodium quinoa HOM05D000691 ORTHO05D000378 7.1e-06 53.5 58 39.7
AUR62031208 Chenopodium quinoa HOM05D000691 ORTHO05D000378 7.1e-06 53.5 60 41.7
AUR62036964 Chenopodium quinoa HOM05D000030 ORTHO05D000378 7.1e-06 53.5 58 39.7
AUR62041848 Chenopodium quinoa HOM05D004398 ORTHO05D005268 7.1e-06 53.5 58 39.7
Sopen05g015410 Solanum pennellii HOM05D000004 ORTHO05D000002 7.1e-06 53.5 58 46.6
Sopen11g021550 Solanum pennellii HOM05D000004 ORTHO05D000002 7.1e-06 53.5 58 44.8
CSS0045028 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.3e-06 53.1 64 42.2


User provided reference genes

Program Settings