Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017858 Camellia sinensis var. sinensis HOM05D002012 ORTHO05D001992 2.1e-54 215.3 100 100.0
Actinidia30208 Actinidia chinensis HOM05D002012 ORTHO05D001992 1.3e-16 89.7 46 87.0
Nitab4.5_0000343g0100 Nicotiana tabacum HOM05D002012 ORTHO05D001992 3.0e-16 88.6 46 84.8
Peaxi162Scf00127g00035 Petunia axillaris HOM05D002012 ORTHO05D001992 3.0e-16 88.6 46 84.8
vmacro17189 Vaccinium macrocarpon HOM05D002012 ORTHO05D001992 3.9e-16 88.2 46 82.6
CAN.G258.8 Capsicum annuum HOM05D002012 ORTHO05D001992 5.1e-16 87.8 46 82.6
Haze_25988 Corylus avellana HOM05D002012 ORTHO05D001992 6.7e-16 87.4 46 82.6
Haze_25996 Corylus avellana HOM05D002012 ORTHO05D001992 6.7e-16 87.4 46 82.6
Dinv25565 Davidia involucrata HOM05D002012 ORTHO05D001992 6.7e-16 87.4 46 82.6
Sopen07g021140 Solanum pennellii HOM05D002012 ORTHO05D001992 6.7e-16 87.4 46 82.6
CANSAT56G2451 Cannabis sativa HOM05D002012 ORTHO05D001992 1.1e-15 86.7 46 78.3
Dinv42379 Davidia involucrata HOM05D002012 ORTHO05D001992 1.1e-15 86.7 46 82.6
Migut.J00935 Erythranthe guttata HOM05D002012 ORTHO05D001992 1.1e-15 86.7 46 80.4
MD15G1216100 Malus domestica HOM05D002012 ORTHO05D001992 1.1e-15 86.7 46 82.6
SalBow6G4123 Salvia bowleyana HOM05D002012 ORTHO05D001992 1.1e-15 86.7 46 78.3
SGA_v2.0_scaffold91G28092 Striga asiatica HOM05D002012 ORTHO05D001992 1.1e-15 86.7 46 80.4
Cfa003016 Carpinus fangiana HOM05D002012 ORTHO05D001992 1.9e-15 85.9 46 80.4
Nitab4.5_0008382g0010 Nicotiana tabacum HOM05D002012 ORTHO05D001992 2.5e-15 85.5 46 82.6
FAN28G1411 Fragaria x ananassa HOM05D002012 ORTHO05D001992 3.3e-15 85.1 46 80.4
MD00G1142500 Malus domestica HOM05D002012 ORTHO05D001992 4.3e-15 84.7 46 80.4
MD02G1088900 Malus domestica HOM05D002012 ORTHO05D001992 4.3e-15 84.7 46 80.4
Eucgr.C00822 Eucalyptus grandis HOM05D002012 ORTHO05D001992 5.6e-15 84.3 46 78.3
Lj7C686G2 Lonicera japonica HOM05D002012 ORTHO05D001992 5.6e-15 84.3 46 80.4
QL11p000520 Quercus lobata HOM05D002012 ORTHO05D001992 5.6e-15 84.3 46 76.1
TAR636G0107 Trochodendron aralioides HOM05D002012 ORTHO05D001992 5.6e-15 84.3 46 80.4
ClCG11G001450 Citrullus lanatus HOM05D002012 ORTHO05D001992 7.4e-15 84.0 46 78.3
MELO3C004651.2 Cucumis melo HOM05D002012 ORTHO05D001992 7.4e-15 84.0 46 78.3
CsaV3_2G001170 Cucumis sativus L. HOM05D002012 ORTHO05D001992 7.4e-15 84.0 46 78.3
Oeu063415.1 Olea europaea HOM05D002012 ORTHO05D001992 7.4e-15 84.0 45 77.8
Solyc07g041660.4 Solanum lycopersicum HOM05D002012 ORTHO05D001992 7.4e-15 84.0 46 80.4
arahy.Tifrunner.gnm1.ann1.BD8MJQ Arachis hypogaea HOM05D002012 ORTHO05D001992 1.3e-14 83.2 46 80.4
arahy.Tifrunner.gnm1.ann1.H8KNJ8 Arachis hypogaea HOM05D002012 ORTHO05D001992 1.3e-14 83.2 46 80.4
Cc06_g12050 Coffea canephora HOM05D002012 ORTHO05D001992 1.3e-14 83.2 46 76.1
TWI63G1275 Tripterygium wilfordii HOM05D002012 ORTHO05D001992 1.3e-14 83.2 46 76.1
TAR624G1209 Trochodendron aralioides HOM05D002012 ORTHO05D001992 1.3e-14 83.2 46 78.3
FAN23G2131 Fragaria x ananassa HOM05D002012 ORTHO05D001992 1.6e-14 82.8 46 78.3
FAN26G0159 Fragaria x ananassa HOM05D002012 ORTHO05D001992 1.6e-14 82.8 46 78.3
FAN26G1695 Fragaria x ananassa HOM05D002012 ORTHO05D001992 1.6e-14 82.8 46 78.3
Manes.16G096300 Manihot esculenta HOM05D002012 ORTHO05D001992 1.6e-14 82.8 46 76.1
RcHm_v2.0_Chr2g0094551 Rosa chinensis HOM05D002012 ORTHO05D001992 1.6e-14 82.8 46 78.3
TWI34G1750 Tripterygium wilfordii HOM05D002012 ORTHO05D001992 1.6e-14 82.8 46 73.9
GSVIVG01015094001 Vitis vinifera HOM05D002012 ORTHO05D001992 1.6e-14 82.8 46 78.3
Ciclev10007498m.g Citrus clementina HOM05D002012 ORTHO05D001992 2.1e-14 82.4 46 73.9
Prupe.7G200900 Prunus persica HOM05D002012 ORTHO05D001992 2.8e-14 82.0 46 78.3
Atru.chr7.1695 Acer truncatum HOM05D002012 ORTHO05D001992 3.7e-14 81.6 46 71.7
CiPaw.03G207500 Carya illinoinensis HOM05D002012 ORTHO05D001992 3.7e-14 81.6 46 78.3
CDE06G1025 Ceratophyllum demersum HOM05D002012 ORTHO05D001992 3.7e-14 81.6 46 78.3
DCAR_028322 Daucus carota HOM05D002012 ORTHO05D001992 3.7e-14 81.6 75 54.7
FvH4_1g08450 Fragaria vesca HOM05D002012 ORTHO05D001992 4.8e-14 81.3 46 76.1
FAN19G0643 Fragaria x ananassa HOM05D002012 ORTHO05D001992 4.8e-14 81.3 46 76.1
MBI19_g11833_MAGBIO Magnolia biondii HOM05D002012 ORTHO05D001992 4.8e-14 81.3 47 76.6
Ca_21316_v3 Cicer arietinum L. HOM05D002012 ORTHO05D001992 6.2e-14 80.9 46 76.1
Glyma.17G050100 Glycine max HOM05D002012 ORTHO05D001992 6.2e-14 80.9 46 76.1
Sc08g0008860 Simmondsia chinensis HOM05D002012 ORTHO05D001992 6.2e-14 80.9 46 73.9
Cpa.g.sc28.60 Carica papaya HOM05D002012 ORTHO05D001992 8.1e-14 80.5 45 77.8
Manes.03G039600 Manihot esculenta HOM05D002012 ORTHO05D001992 8.1e-14 80.5 46 76.1
Thecc.09G078800 Theobroma cacao HOM05D002012 ORTHO05D001992 8.1e-14 80.5 46 71.7
MSTRG.26464 Avicennia marina HOM05D002012 ORTHO05D001992 1.1e-13 80.1 46 76.1
BcaB06g26946 Brassica carinata HOM05D002012 ORTHO05D001992 1.1e-13 80.1 46 71.7
Lj6g0020899 Lotus japonicus HOM05D002012 ORTHO05D001992 1.1e-13 80.1 45 75.6
Os02g0777100 Oryza sativa ssp. japonica HOM05D002012 ORTHO05D001992 1.1e-13 80.1 46 73.9
Glyma.13G109600 Glycine max HOM05D002012 ORTHO05D001992 1.4e-13 79.7 47 72.3
Medtr4g125480 Medicago truncatula HOM05D002012 ORTHO05D001992 1.4e-13 79.7 46 76.1
CiPaw.04G144400 Carya illinoinensis HOM05D002012 ORTHO05D001992 1.8e-13 79.3 45 77.8
Nn8g38672 Nelumbo nucifera HOM05D002012 ORTHO05D001992 1.8e-13 79.3 46 73.9
Psat1g133640 Pisum sativum HOM05D002012 ORTHO05D001992 1.8e-13 79.3 46 73.9
VMungo1215G3349 Vigna mungo HOM05D002012 ORTHO05D001992 1.8e-13 79.3 46 73.9
MSTRG.19467 Avicennia marina HOM05D002012 ORTHO05D001992 2.4e-13 79.0 46 73.9
BcaC02g09479 Brassica carinata HOM05D002012 ORTHO05D001992 2.4e-13 79.0 46 69.6
A04p09750 Brassica napus HOM05D002012 ORTHO05D001992 2.4e-13 79.0 46 69.6
C04p43250 Brassica napus HOM05D002012 ORTHO05D001992 2.4e-13 79.0 46 69.6
BolC4t25905H Brassica oleracea HOM05D002012 ORTHO05D001992 2.4e-13 79.0 46 69.6
BraA04t16637Z Brassica rapa HOM05D002012 ORTHO05D001992 2.4e-13 79.0 46 69.6
Thhalv10003439m.g Eutrema salsugineum HOM05D002012 ORTHO05D001992 2.4e-13 79.0 46 69.6
Phvul.003G131700 Phaseolus vulgaris HOM05D002012 ORTHO05D001992 2.4e-13 79.0 46 71.7
PGR142G4458 Punica granatum HOM05D002012 ORTHO05D001992 2.4e-13 79.0 46 71.7
Sc08g0009350 Simmondsia chinensis HOM05D002012 ORTHO05D001992 2.4e-13 79.0 46 71.7
Aqoxy7G04080 Aquilegia oxysepala HOM05D002012 ORTHO05D001992 3.1e-13 78.6 46 69.6
COL.COLO4_18109 Corchorus olitorius HOM05D002012 ORTHO05D001992 3.1e-13 78.6 46 69.6
Gohir.A05G033400 Gossypium hirsutum HOM05D002012 ORTHO05D001992 3.1e-13 78.6 46 69.6
Gohir.D05G034900 Gossypium hirsutum HOM05D002012 ORTHO05D001992 3.1e-13 78.6 46 69.6
Gorai.009G035300 Gossypium raimondii HOM05D002012 ORTHO05D001992 3.1e-13 78.6 46 69.6
Duzib168G1258 Durio zibethinus HOM05D002012 ORTHO05D001992 4.0e-13 78.2 46 69.6
PSO135G0920 Papaver somniferum HOM05D002012 ORTHO05D001992 4.0e-13 78.2 45 73.3
THA.LOC104808888 Tarenaya hassleriana HOM05D002012 ORTHO05D001992 4.0e-13 78.2 46 71.7
AL7G44380 Arabidopsis lyrata HOM05D002012 ORTHO05D001992 5.3e-13 77.8 46 67.4
AT5G35560 Arabidopsis thaliana HOM05D002012 ORTHO05D001992 5.3e-13 77.8 46 67.4
Glyma.15G176600 Glycine max HOM05D002012 ORTHO05D001992 5.3e-13 77.8 49 67.3
Lj4g0000518 Lotus japonicus HOM05D002012 ORTHO05D001992 5.3e-13 77.8 46 73.9
Lalb_Chr13g0299491 Lupinus albus HOM05D002012 ORTHO05D001992 5.3e-13 77.8 46 73.9
Potri.006G143000 Populus trichocarpa HOM05D002012 ORTHO05D001992 5.3e-13 77.8 46 71.7
PSO724G0857 Papaver somniferum HOM05D002012 ORTHO05D001992 6.9e-13 77.4 46 69.6
Hund26019 Selenicereus undatus HOM05D002012 ORTHO05D001992 6.9e-13 77.4 46 69.6
DCAR_011951 Daucus carota HOM05D002012 ORTHO05D001992 9.0e-13 77.0 45 73.3
Duzib187G1411 Durio zibethinus HOM05D002012 ORTHO05D001992 9.0e-13 77.0 46 67.4
HanXRQChr12g0354321 Helianthus annuus HOM05D002012 ORTHO05D001992 9.0e-13 77.0 46 69.6
Sabra06G0112000 Salix brachista HOM05D002012 ORTHO05D001992 9.0e-13 77.0 45 73.3
TPR.G9457 Trifolium pratense HOM05D002012 ORTHO05D001992 9.0e-13 77.0 46 71.7
Lalb_Chr11g0074281 Lupinus albus HOM05D002012 ORTHO05D001992 1.2e-12 76.6 46 71.7
Sed0011181 Sechium edule HOM05D002012 ORTHO05D001992 1.2e-12 76.6 46 69.6
VMungo1309G2233 Vigna mungo HOM05D002012 ORTHO05D001992 1.2e-12 76.6 46 71.7
TPR.G28669 Trifolium pratense HOM05D002012 ORTHO05D001992 1.5e-12 76.3 46 71.7
ECA234G2093 Erigeron canadensis HOM05D002012 ORTHO05D001992 2.0e-12 75.9 46 67.4
Medtr2g041470 Medicago truncatula HOM05D002012 ORTHO05D001992 2.0e-12 75.9 46 67.4
Psat4g017920 Pisum sativum HOM05D002012 ORTHO05D001992 2.0e-12 75.9 46 67.4
Sp7g06790 Schrenkiella parvula HOM05D002012 ORTHO05D001992 2.0e-12 75.9 46 65.2
arahy.Tifrunner.gnm1.ann1.I4CWBG Arachis hypogaea HOM05D002012 ORTHO05D001992 2.6e-12 75.5 46 71.7
arahy.Tifrunner.gnm1.ann1.TG362X Arachis hypogaea HOM05D002012 ORTHO05D001992 2.6e-12 75.5 46 71.7
Glyma.09G068800 Glycine max HOM05D002012 ORTHO05D001992 3.4e-12 75.1 45 71.1
Aa31LG9G5250 Aethionema arabicum HOM05D002012 ORTHO05D001992 4.5e-12 74.7 46 63.0
HPP92_007985 Vanilla planifolia HOM05D002012 ORTHO05D001992 4.5e-12 74.7 46 67.4
Ca_26331_v3 Cicer arietinum L. HOM05D002012 ORTHO05D001992 5.8e-12 74.3 46 67.4
Phvul.009G227900 Phaseolus vulgaris HOM05D002012 ORTHO05D001992 5.8e-12 74.3 46 69.6
ATR0598G305 Amborella trichopoda HOM05D002012 ORTHO05D001992 7.6e-12 73.9 45 73.3
Sed0014285 Sechium edule HOM05D002012 ORTHO05D001992 7.6e-12 73.9 46 65.2
Zm00001eb193170 Zea mays HOM05D002012 ORTHO05D001992 7.6e-12 73.9 46 67.4
HanXRQChr10g0319671 Helianthus annuus HOM05D002012 ORTHO05D001992 1.0e-11 73.6 46 65.2
unitig_21.g20983 Utricularia gibba HOM05D002012 ORTHO05D001992 1.0e-11 73.6 46 67.4
EL10Ac8g19105 Beta vulgaris HOM05D002012 ORTHO05D001992 1.7e-11 72.8 46 63.0
AUR62028982 Chenopodium quinoa HOM05D002012 ORTHO05D001992 1.7e-11 72.8 45 66.7
Lj9C280T7 Lonicera japonica HOM05D002012 ORTHO05D001992 1.7e-11 72.8 46 67.4
Lsat_1_v5_gn_5_141180 Lactuca sativa HOM05D002012 ORTHO05D001992 2.9e-11 72.0 46 63.0
Ah.09g231410 Amaranthus hybridus HOM05D002012 ORTHO05D001992 3.8e-11 71.6 46 63.0
AUR62025192 Chenopodium quinoa HOM05D002012 ORTHO05D001992 1.4e-10 69.7 45 64.4
ECA236G1251 Erigeron canadensis HOM05D002012 ORTHO05D001992 1.9e-10 69.3 46 60.9
Hund08733 Selenicereus undatus HOM05D002012 ORTHO05D001992 5.5e-10 67.8 46 60.9
HanXRQChr06g0178161 Helianthus annuus HOM05D002012 ORTHO05D001992 7.1e-10 67.4 46 54.3
Lsat_1_v5_gn_8_86401 Lactuca sativa HOM05D002012 ORTHO05D001992 7.1e-10 67.4 46 54.3
Lalb_Chr07g0181121 Lupinus albus HOM05D002012 ORTHO05D001992 7.1e-10 67.4 46 65.2
EL10Ac3g06349 Beta vulgaris HOM05D001385 ORTHO05D001992 3.5e-09 65.1 45 60.0
SEGI_10065 Sequoiadendron giganteum HOM05D002012 ORTHO05D001992 3.9e-08 61.6 45 57.8
CDE07G0836 Ceratophyllum demersum HOM05D002012 ORTHO05D001992 5.1e-08 61.2 46 65.2
MBI07_g21078_MAGBIO Magnolia biondii HOM05D002012 ORTHO05D001992 4.8e-06 54.7 45 44.4


User provided reference genes

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