Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017831 Camellia sinensis var. sinensis HOM05D005763 ORTHO05D005970 2.2e-84 316.2 250 100.0
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 3.9e-65 252.3 229 93.0
Actinidia39003 Actinidia chinensis HOM05D005763 ORTHO05D005970 1.3e-20 104.4 259 34.7
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 2.2e-20 103.6 254 34.3
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 1.6e-18 97.4 256 32.8
Dinv19412 Davidia involucrata HOM05D001309 ORTHO05D005970 6.1e-18 95.5 229 34.1
GSVIVG01023250001 Vitis vinifera HOM05D005763 ORTHO05D005970 4.4e-16 89.4 234 30.8
Dinv19414 Davidia involucrata HOM05D005763 ORTHO05D005970 7.0e-14 82.0 230 28.7
Actinidia01605 Actinidia chinensis HOM05D001309 ORTHO05D005970 1.9e-11 73.9 43 76.7
vmacro01714 Vaccinium macrocarpon HOM05D005763 ORTHO05D005970 2.1e-10 70.5 121 42.1
CiPaw.05G004900 Carya illinoinensis HOM05D005763 ORTHO05D005970 4.7e-10 69.3 230 28.7
vmacro01712 Vaccinium macrocarpon HOM05D005763 ORTHO05D005970 1.0e-09 68.2 229 28.8
CSS0027988 Camellia sinensis var. sinensis HOM05D005763 ORTHO05D005970 1.8e-09 67.4 229 26.6
Oeu023404.2 Olea europaea HOM05D001309 ORTHO05D005970 2.3e-09 67.0 44 68.2
TAR628G0443 Trochodendron aralioides HOM05D005763 ORTHO05D005970 3.0e-09 66.6 245 27.8
MSTRG.16490 Avicennia marina HOM05D005763 ORTHO05D005970 5.2e-09 65.9 232 29.3
Hma1.2p1_0633F.1_g192590 Hydrangea macrophylla HOM05D005763 ORTHO05D005970 6.8e-09 65.5 233 27.9
Gohir.A12G044100 Gossypium hirsutum HOM05D001309 ORTHO05D005970 4.4e-08 62.8 48 60.4
Gohir.D12G043100 Gossypium hirsutum HOM05D001309 ORTHO05D000385 4.4e-08 62.8 48 60.4
Gorai.008G045300 Gossypium raimondii HOM05D001309 ORTHO05D005970 4.4e-08 62.8 48 60.4
Rhsim11G0122700 Rhododendron simsii HOM05D005763 ORTHO05D005970 4.4e-08 62.8 229 27.5
Hma1.2p1_0633F.1_g192600 Hydrangea macrophylla HOM05D005763 ORTHO05D005970 5.7e-08 62.4 229 28.4
Lsat_1_v5_gn_7_76141 Lactuca sativa HOM05D005763 ORTHO05D005970 2.8e-07 60.1 47 57.4
MD09G1027200 Malus domestica HOM05D005763 ORTHO05D005970 2.8e-07 60.1 44 68.2
Nitab4.5_0004106g0020 Nicotiana tabacum HOM05D005763 ORTHO05D005970 4.9e-07 59.3 47 55.3
Thecc.02G018900 Theobroma cacao HOM05D005763 ORTHO05D005970 4.9e-07 59.3 53 54.7
Cfa004488 Carpinus fangiana HOM05D005763 ORTHO05D005970 6.3e-07 58.9 230 28.3
Ciclev10000672m.g Citrus clementina HOM05D005763 ORTHO05D005970 6.3e-07 58.9 45 60.0
Gohir.D01G174600 Gossypium hirsutum HOM05D001309 ORTHO05D000385 6.3e-07 58.9 45 60.0
Gorai.002G216700 Gossypium raimondii HOM05D001309 ORTHO05D000385 6.3e-07 58.9 45 60.0
Nn7g37262 Nelumbo nucifera HOM05D005763 ORTHO05D005970 6.3e-07 58.9 48 56.2
Atru.chr6.496 Acer truncatum HOM05D005763 ORTHO05D005970 8.3e-07 58.5 45 57.8
COL.COLO4_17726 Corchorus olitorius HOM05D001309 ORTHO05D005970 8.3e-07 58.5 43 65.1
Eucgr.I02762 Eucalyptus grandis HOM05D005763 ORTHO05D005970 8.3e-07 58.5 46 58.7
QL02p100429 Quercus lobata HOM05D005763 ORTHO05D005970 8.3e-07 58.5 236 28.0
COL.COLO4_29043 Corchorus olitorius HOM05D005763 ORTHO05D005970 1.8e-06 57.4 40 65.0
ECA236G4930 Erigeron canadensis HOM05D005763 ORTHO05D005970 1.8e-06 57.4 46 56.5
Aqoxy5G02633 Aquilegia oxysepala HOM05D005763 ORTHO05D005970 2.4e-06 57.0 44 61.4
MD15G1435000 Malus domestica HOM05D005763 ORTHO05D005970 2.4e-06 57.0 44 59.1
PSO017G0231 Papaver somniferum HOM05D005763 ORTHO05D005970 2.4e-06 57.0 42 59.5
SGA_v2.0_scaffold304G47918 Striga asiatica HOM05D005763 ORTHO05D005970 2.4e-06 57.0 47 61.7
Gohir.A01G183600 Gossypium hirsutum HOM05D001309 ORTHO05D005970 4.1e-06 56.2 45 57.8
TWI14G0927 Tripterygium wilfordii HOM05D005763 ORTHO05D005970 4.1e-06 56.2 234 25.2
Haze_10045 Corylus avellana HOM05D005763 ORTHO05D005970 5.4e-06 55.8 230 27.0
Sc07g0005120 Simmondsia chinensis HOM05D005763 ORTHO05D005970 5.4e-06 55.8 47 55.3
PSO170G4663 Papaver somniferum HOM05D005763 ORTHO05D005970 7.0e-06 55.5 42 57.1
VMungo0540G0189 Vigna mungo HOM05D005763 ORTHO05D005970 7.0e-06 55.5 44 56.8
Migut.B00776 Erythranthe guttata HOM05D005763 ORTHO05D005970 9.2e-06 55.1 235 27.7
Phvul.006G219000 Phaseolus vulgaris HOM05D005763 ORTHO05D005970 9.2e-06 55.1 44 56.8
Prupe.7G105300 Prunus persica HOM05D005763 ORTHO05D005970 9.2e-06 55.1 44 54.5


User provided reference genes

Program Settings