Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017793 Camellia sinensis var. sinensis HOM05D018914 ORTHO05D017724 2.5e-46 188.3 91 100.0
CSS0000784 Camellia sinensis var. sinensis HOM05D018914 ORTHO05D017724 1.5e-27 125.9 85 74.1
CSS0015509 Camellia sinensis var. sinensis HOM05D018914 ORTHO05D017724 2.6e-27 125.2 87 71.3
CSS0043825 Camellia sinensis var. sinensis HOM05D018914 ORTHO05D017724 7.6e-27 123.6 82 70.7
Rhsim04G0123900 Rhododendron simsii HOM05D000182 ORTHO05D000112 1.1e-20 103.2 70 65.7
Rhsim01G0085300 Rhododendron simsii HOM05D000002 ORTHO05D000047 9.0e-20 100.1 72 59.7
RhsimUnG0237200 Rhododendron simsii HOM05D000002 ORTHO05D013260 1.5e-19 99.4 70 62.9
Rhsim02G0184000 Rhododendron simsii HOM05D010463 ORTHO05D017724 4.5e-19 97.8 67 62.7
CSS0041521 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D017724 5.0e-18 94.4 70 64.3
CSS0006020 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-17 93.2 70 62.9
CSS0004988 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-14 82.8 64 60.9
TWI77G0837 Tripterygium wilfordii HOM05D000002 ORTHO05D013260 9.7e-14 80.1 76 52.6
CSS0043805 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.4e-12 75.5 69 55.1
CSS0009355 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-10 69.7 56 57.1
Rhsim06G0128100 Rhododendron simsii HOM05D000002 ORTHO05D000047 5.0e-10 67.8 58 51.7
CSS0023498 Camellia sinensis var. sinensis HOM05D018914 ORTHO05D013260 3.2e-09 65.1 45 66.7
TAR546G0002 Trochodendron aralioides HOM05D000002 ORTHO05D017724 3.0e-07 58.5 57 42.1
TAR242G0001 Trochodendron aralioides HOM05D018914 ORTHO05D017724 2.6e-06 55.5 67 40.3


User provided reference genes

Program Settings