Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017788 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 1.7e-93 345.9 167 100.0
CSS0004692 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 4.1e-87 324.7 190 86.3
Rhsim09G0141500 Rhododendron simsii HOM05D007308 ORTHO05D009157 1.9e-68 262.7 191 70.2
Hma1.2p1_0457F.1_g156910 Hydrangea macrophylla HOM05D007308 ORTHO05D009157 3.1e-66 255.4 183 68.3
Dinv08592 Davidia involucrata HOM05D007308 ORTHO05D009157 5.8e-65 251.1 188 67.0
vmacro10315 Vaccinium macrocarpon HOM05D007308 ORTHO05D009157 8.4e-64 247.3 187 67.4
TAR623G1715 Trochodendron aralioides HOM05D007308 ORTHO05D009157 2.3e-61 239.2 187 64.2
Lsat_1_v5_gn_3_53161 Lactuca sativa HOM05D007308 ORTHO05D009157 3.0e-61 238.8 190 63.2
MSTRG.27555 Avicennia marina HOM05D007308 ORTHO05D009157 3.3e-60 235.3 190 62.1
GSVIVG01034647001 Vitis vinifera HOM05D007308 ORTHO05D009157 7.4e-60 234.2 190 63.2
CiPaw.13G043100 Carya illinoinensis HOM05D007308 ORTHO05D009157 1.6e-59 233.0 178 65.2
Cc02_g09470 Coffea canephora HOM05D007308 ORTHO05D009157 5.3e-58 228.0 181 62.4
Nn2g14273 Nelumbo nucifera HOM05D007308 ORTHO05D009157 5.3e-58 228.0 182 61.0
Prupe.2G071800 Prunus persica HOM05D007308 ORTHO05D009157 1.2e-57 226.9 189 58.7
THA.LOC104816471 Tarenaya hassleriana HOM05D007308 ORTHO05D009157 2.0e-57 226.1 189 61.9
HanXRQChr05g0147281 Helianthus annuus HOM05D007308 ORTHO05D009157 3.4e-57 225.3 183 61.7
arahy.Tifrunner.gnm1.ann1.ZU0NEU Arachis hypogaea HOM05D007308 ORTHO05D009157 9.9e-57 223.8 180 60.6
Medtr1g090630 Medicago truncatula HOM05D007308 ORTHO05D009157 9.9e-57 223.8 177 62.7
Sabra10G0189200 Salix brachista HOM05D000139 ORTHO05D000103 9.9e-57 223.8 178 64.0
Potri.010G241700 Populus trichocarpa HOM05D007308 ORTHO05D009157 2.2e-56 222.6 176 63.6
Glyma.20G194000 Glycine max HOM05D007308 ORTHO05D009157 4.9e-56 221.5 173 61.3
Lj5g0023307 Lotus japonicus HOM05D007308 ORTHO05D009157 4.9e-56 221.5 169 63.3
Glyma.10G196200 Glycine max HOM05D007308 ORTHO05D009157 6.4e-56 221.1 173 61.3
arahy.Tifrunner.gnm1.ann1.I1QH9V Arachis hypogaea HOM05D007308 ORTHO05D009157 1.4e-55 219.9 183 58.5
TWI15G0952 Tripterygium wilfordii HOM05D007308 ORTHO05D009157 2.4e-55 219.2 183 59.0
Aqoxy1G00692 Aquilegia oxysepala HOM05D007308 ORTHO05D009157 3.2e-55 218.8 172 62.8
QL04p047115 Quercus lobata HOM05D007308 ORTHO05D009157 3.2e-55 218.8 188 60.1
SalBow3G3836 Salvia bowleyana HOM05D007308 ORTHO05D009157 3.2e-55 218.8 190 61.1
CDE02G0914 Ceratophyllum demersum HOM05D007308 ORTHO05D009157 4.2e-55 218.4 174 59.2
ECA232G3668 Erigeron canadensis HOM05D007308 ORTHO05D009157 4.2e-55 218.4 181 61.3
ClCG05G021890 Citrullus lanatus HOM05D007308 ORTHO05D009157 9.3e-55 217.2 182 59.3
MBI17_g22148_MAGBIO Magnolia biondii HOM05D007308 ORTHO05D009157 9.3e-55 217.2 175 61.7
AT5G04830 Arabidopsis thaliana HOM05D007308 ORTHO05D009157 1.6e-54 216.5 174 60.9
Ciclev10016517m.g Citrus clementina HOM05D007308 ORTHO05D009157 1.6e-54 216.5 185 60.0
Lalb_Chr02g0150981 Lupinus albus HOM05D007308 ORTHO05D009157 2.1e-54 216.1 175 61.7
CANSAT56G1109 Cannabis sativa HOM05D007308 ORTHO05D009157 2.7e-54 215.7 174 62.1
Migut.F00856 Erythranthe guttata HOM05D007308 ORTHO05D009157 2.7e-54 215.7 189 58.2
PGR044G1814 Punica granatum HOM05D007308 ORTHO05D009157 2.7e-54 215.7 187 57.2
Thecc.10G116800 Theobroma cacao HOM05D007308 ORTHO05D009157 3.5e-54 215.3 192 59.4
CsaV3_5G035250 Cucumis sativus L. HOM05D007308 ORTHO05D009157 7.9e-54 214.2 182 58.8
AL6G14490 Arabidopsis lyrata HOM05D007308 ORTHO05D009157 1.3e-53 213.4 187 57.8
Lj3C924T9 Lonicera japonica HOM05D007308 ORTHO05D009157 1.3e-53 213.4 219 52.5
Gohir.D13G010000 Gossypium hirsutum HOM05D007308 ORTHO05D009157 1.8e-53 213.0 170 61.2
Eucgr.J00279 Eucalyptus grandis HOM05D007308 ORTHO05D009157 3.0e-53 212.2 178 61.2
Hund06794 Selenicereus undatus HOM05D007308 ORTHO05D009157 3.0e-53 212.2 180 60.0
Sabra08G0011300 Salix brachista HOM05D007308 ORTHO05D009157 5.1e-53 211.5 180 57.8
BcaB01g05916 Brassica carinata HOM05D007308 ORTHO05D009157 8.7e-53 210.7 179 60.3
C03p02230 Brassica napus HOM05D007308 ORTHO05D009157 8.7e-53 210.7 179 60.3
BolC3t12774H Brassica oleracea HOM05D007308 ORTHO05D009157 8.7e-53 210.7 179 60.3
Sed0002245 Sechium edule HOM05D007308 ORTHO05D009157 1.1e-52 210.3 179 58.1
Duzib106G1839 Durio zibethinus HOM05D007308 ORTHO05D009157 1.5e-52 209.9 180 60.0
Gorai.013G010700 Gossypium raimondii HOM05D007308 ORTHO05D009157 1.5e-52 209.9 170 60.6
Haze_03470 Corylus avellana HOM05D007308 ORTHO05D009157 1.9e-52 209.5 187 58.3
Gohir.A13G009300 Gossypium hirsutum HOM05D007308 ORTHO05D009157 1.9e-52 209.5 170 60.6
Carub.0006s0371 Capsella rubella HOM05D007308 ORTHO05D009157 2.5e-52 209.1 166 61.4
VMungo0720G2616 Vigna mungo HOM05D007308 ORTHO05D009157 2.5e-52 209.1 174 59.2
Sc20g0001110 Simmondsia chinensis HOM05D007308 ORTHO05D009157 3.3e-52 208.8 173 60.7
Sed0004755 Sechium edule HOM05D007308 ORTHO05D009157 5.6e-52 208.0 169 60.4
Phvul.007G138800 Phaseolus vulgaris HOM05D007308 ORTHO05D009157 2.1e-51 206.1 175 57.7
Sp6g38000 Schrenkiella parvula HOM05D007308 ORTHO05D009157 2.1e-51 206.1 155 63.9
Nitab4.5_0001047g0020 Nicotiana tabacum HOM05D007308 ORTHO05D009157 2.8e-51 205.7 179 59.2
PGSC0003DMG400001980 Solanum tuberosum HOM05D007308 ORTHO05D009157 3.7e-51 205.3 176 60.8
PSO339G2601 Papaver somniferum HOM05D007308 ORTHO05D009157 8.2e-51 204.1 161 60.2
Thhalv10014751m.g Eutrema salsugineum HOM05D007308 ORTHO05D009157 1.1e-50 203.8 155 64.5
Peaxi162Scf00725g00524 Petunia axillaris HOM05D007308 ORTHO05D009157 1.8e-50 203.0 179 59.2
Aa31LG11G5650 Aethionema arabicum HOM05D007308 ORTHO05D009157 2.4e-50 202.6 154 63.6
CARHR208450 Cardamine hirsuta HOM05D007308 ORTHO05D009157 2.4e-50 202.6 176 57.4
A10p31380 Brassica napus HOM05D007308 ORTHO05D009157 3.1e-50 202.2 157 62.4
Zm00001eb362380 Zea mays HOM05D007308 ORTHO05D009157 3.1e-50 202.2 155 60.6
BcaC06g32190 Brassica carinata HOM05D007308 ORTHO05D009157 4.0e-50 201.8 157 62.4
PSO384G3587 Papaver somniferum HOM05D007308 ORTHO05D009157 5.3e-50 201.4 161 59.0
SGA_v2.0_scaffold272G46352 Striga asiatica HOM05D007308 ORTHO05D009157 5.3e-50 201.4 252 46.0
Lalb_Chr21g0312841 Lupinus albus HOM05D007308 ORTHO05D009157 6.9e-50 201.1 154 62.3
HPP92_005473 Vanilla planifolia HOM05D007308 ORTHO05D009157 6.9e-50 201.1 159 61.6
ATR0772G202 Amborella trichopoda HOM05D007308 ORTHO05D009157 9.0e-50 200.7 174 56.3
A03p01870 Brassica napus HOM05D007308 ORTHO05D009157 9.0e-50 200.7 179 58.1
BraA03t09557Z Brassica rapa HOM05D007308 ORTHO05D009157 9.0e-50 200.7 179 58.1
MD07G1062000 Malus domestica HOM05D007308 ORTHO05D009157 9.0e-50 200.7 194 54.6
C09p72050 Brassica napus HOM05D007308 ORTHO05D009157 1.5e-49 199.9 157 61.8
unitig_32.g11899 Utricularia gibba HOM05D007308 ORTHO05D009157 1.5e-49 199.9 176 57.4
BraA10t45184Z Brassica rapa HOM05D007308 ORTHO05D009157 2.6e-49 199.1 165 59.4
BolC9t59950H Brassica oleracea HOM05D007308 ORTHO05D009157 3.4e-49 198.7 165 59.4
Os01g0965900 Oryza sativa ssp. japonica HOM05D007308 ORTHO05D009157 5.8e-49 198.0 160 60.0
PGR044G1810 Punica granatum HOM05D007308 ORTHO05D009157 7.6e-49 197.6 190 52.1
SMO143G0271 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 1.1e-42 177.2 151 57.0
Pp3c19_15880 Physcomitrium patens HOM05D007308 ORTHO05D009157 1.8e-42 176.4 156 54.5
Actinidia34730 Actinidia chinensis HOM05D000139 ORTHO05D000103 1.5e-41 173.3 132 68.9
Pp3c14_20980 Physcomitrium patens HOM05D007308 ORTHO05D009157 3.4e-41 172.2 152 53.3
Mapoly0021s0141 Marchantia polymorpha HOM05D007308 ORTHO05D009157 4.5e-41 171.8 151 55.0
Solyc11g006505.1 Solanum lycopersicum HOM05D007308 ORTHO05D009157 4.5e-41 171.8 149 59.1
AagrBONN_evm.TU.Sc2ySwM_344.2550 Anthoceros agrestis HOM05D007308 ORTHO05D009157 1.0e-40 170.6 180 48.3
MELO3C012339.2 Cucumis melo HOM05D007308 ORTHO05D009157 1.7e-40 169.9 141 61.0
Sopen11g002410 Solanum pennellii HOM05D007308 ORTHO05D009157 5.0e-40 168.3 134 62.7
CiPaw.14G034600 Carya illinoinensis HOM05D007308 ORTHO05D009157 1.6e-38 163.3 199 48.2
SEGI_14438 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 1.4e-37 160.2 188 47.3
SMO265G0003 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 1.8e-37 159.8 151 53.6
Manes.10G060700 Manihot esculenta HOM05D007308 ORTHO05D009157 2.6e-33 146.0 120 60.0
RcHm_v2.0_Chr1g0331851 Rosa chinensis HOM05D007308 ORTHO05D009157 2.9e-32 142.5 132 55.3
SEGI_29808 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 8.5e-32 141.0 132 57.6
Atru.BG.262.p Acer truncatum HOM05D007308 ORTHO05D009157 3.6e-30 135.6 80 82.5
Potri.008G017701 Populus trichocarpa HOM05D007308 ORTHO05D009157 4.7e-30 135.2 109 59.6
Pp3c1_28520 Physcomitrium patens HOM05D007308 ORTHO05D009157 8.2e-27 124.4 119 51.3
BcaNung05151 Brassica carinata HOM05D007308 ORTHO05D009157 2.1e-22 109.8 189 39.7
CBR_g30213 Chara braunii HOM05D007308 ORTHO05D009157 3.5e-17 92.4 131 38.2
Pp3c2_31450 Physcomitrium patens HOM05D007308 ORTHO05D009157 1.7e-11 73.6 57 52.6
PGSC0003DMG400007605 Solanum tuberosum HOM05D000011 ORTHO05D000018 2.8e-11 72.8 45 68.9
Sopen11g002430 Solanum pennellii HOM05D000011 ORTHO05D000018 7.7e-09 64.7 45 64.4
PGSC0003DMG402001979 Solanum tuberosum HOM05D000011 ORTHO05D000018 1.7e-08 63.5 41 65.9


User provided reference genes

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