Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017779 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 0.0e+00 1820.8 1006 100.0
CSS0024032 Camellia sinensis var. sinensis HOM05D000522 ORTHO05D000565 3.2e-251 872.5 888 59.8
CSS0044261 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 2.7e-242 842.8 921 57.4
CSS0023448 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 5.2e-52 210.7 325 43.7
CSS0045249 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 3.5e-40 171.4 321 39.6
CSS0043933 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 4.6e-40 171.0 315 40.0
CSS0041689 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 1.3e-34 152.9 300 37.3
CSS0017543 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 2.3e-31 142.1 274 38.7
CSS0021727 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 1.0e-26 126.7 316 35.4
CSS0020511 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 4.2e-25 121.3 320 33.8
CSS0038691 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 3.5e-24 118.2 96 57.3
CSS0019933 Camellia sinensis var. sinensis HOM05D013673 ORTHO05D015012 1.3e-21 109.8 308 33.1
vmacro21029 Vaccinium macrocarpon HOM05D001320 ORTHO05D002136 4.1e-12 78.2 141 31.9
CSS0008446 Camellia sinensis var. sinensis HOM05D016663 ORTHO05D111536 9.1e-12 77.0 90 50.0
CSS0023411 Camellia sinensis var. sinensis HOM05D016663 ORTHO05D113304 1.1e-09 70.1 119 41.2
Nitab4.5_0006587g0010 Nicotiana tabacum HOM05D008778 ORTHO05D003639 3.2e-09 68.6 277 26.7
CSS0004461 Camellia sinensis var. sinensis HOM05D016663 ORTHO05D111774 9.4e-09 67.0 64 57.8
Peaxi162Scf00820g00119 Petunia axillaris HOM05D008778 ORTHO05D003639 2.1e-08 65.9 142 33.1
Nitab4.5_0000663g0010 Nicotiana tabacum HOM05D008778 ORTHO05D003639 7.9e-08 63.9 159 31.4
CSS0045457 Camellia sinensis var. sinensis HOM05D016663 ORTHO05D113126 1.0e-07 63.5 57 59.6
Peaxi162Scf00169g01112 Petunia axillaris HOM05D008778 ORTHO05D003639 1.4e-07 63.2 158 32.9
Nitab4.5_0001698g0060 Nicotiana tabacum HOM05D008778 ORTHO05D003639 1.1e-06 60.1 153 30.7
CSS0011154 Camellia sinensis var. sinensis HOM05D016663 ORTHO05D110065 7.4e-06 57.4 64 53.1


User provided reference genes

Program Settings