Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017772 Camellia sinensis var. sinensis HOM05D002019 ORTHO05D002150 2.0e-37 158.7 86 100.0
vmacro10845 Vaccinium macrocarpon HOM05D002019 ORTHO05D002150 3.4e-16 88.2 94 61.7
Actinidia39775 Actinidia chinensis HOM05D000606 ORTHO05D002249 3.7e-15 84.7 94 60.6
GSVIVG01015284001 Vitis vinifera HOM05D002019 ORTHO05D002150 4.8e-15 84.3 94 57.4
CSS0008756 Camellia sinensis var. sinensis HOM05D002019 ORTHO05D002150 1.1e-14 83.2 99 60.6
Rhsim05G0041800 Rhododendron simsii HOM05D002019 ORTHO05D002150 1.4e-14 82.8 95 56.8
CiPaw.03G222800 Carya illinoinensis HOM05D002019 ORTHO05D002150 3.8e-12 74.7 78 60.3
Dinv42258 Davidia involucrata HOM05D002019 ORTHO05D002150 3.8e-12 74.7 94 54.3
CSS0002322 Camellia sinensis var. sinensis HOM05D002019 ORTHO05D002150 1.9e-11 72.4 97 57.7
Glyma.05G225900 Glycine max HOM05D002019 ORTHO05D002150 3.3e-11 71.6 96 45.8
Thecc.06G101300 Theobroma cacao HOM05D002019 ORTHO05D002150 3.3e-11 71.6 94 52.1
VMungo0251G1925 Vigna mungo HOM05D002019 ORTHO05D002150 7.2e-11 70.5 95 47.4
Glyma.08G032800 Glycine max HOM05D002019 ORTHO05D002150 9.5e-11 70.1 99 46.5
TAR383G0675 Trochodendron aralioides HOM05D002019 ORTHO05D002150 9.5e-11 70.1 93 49.5
Dinv36721 Davidia involucrata HOM05D002019 ORTHO05D002150 2.1e-10 68.9 79 58.2
Phvul.002G307900 Phaseolus vulgaris HOM05D002019 ORTHO05D002150 3.6e-10 68.2 96 46.9
Glyma.07G125600 Glycine max HOM05D002019 ORTHO05D002150 4.7e-10 67.8 91 47.3
Psat7g017520 Pisum sativum HOM05D002019 ORTHO05D002150 4.7e-10 67.8 88 48.9
Atru.chr7.1480 Acer truncatum HOM05D002019 ORTHO05D002150 6.1e-10 67.4 109 42.2
Psat7g018040 Pisum sativum HOM05D002019 ORTHO05D002150 6.1e-10 67.4 88 48.9
Cfa003163 Carpinus fangiana HOM05D002019 ORTHO05D002150 8.0e-10 67.0 93 48.4
EL10Ac9g21200 Beta vulgaris HOM05D002019 ORTHO05D002150 1.0e-09 66.6 91 50.5
Phvul.004G174600 Phaseolus vulgaris HOM05D002019 ORTHO05D002150 1.8e-09 65.9 95 45.3
Psat7g017480 Pisum sativum HOM05D002019 ORTHO05D002150 2.3e-09 65.5 87 47.1
Cc06_g10620 Coffea canephora HOM05D002019 ORTHO05D002150 3.0e-09 65.1 94 47.9
Haze_25837 Corylus avellana HOM05D002019 ORTHO05D002150 3.0e-09 65.1 95 48.4
Ah.01g017320 Amaranthus hybridus HOM05D002019 ORTHO05D002150 4.0e-09 64.7 91 48.4
Duzib235G0090 Durio zibethinus HOM05D002019 ORTHO05D002150 5.2e-09 64.3 97 46.4
Dinv37969 Davidia involucrata HOM05D002019 ORTHO05D002150 8.9e-09 63.5 94 45.7
Manes.11G032500 Manihot esculenta HOM05D002019 ORTHO05D002150 8.9e-09 63.5 87 51.7
Manes.16G107900 Manihot esculenta HOM05D002019 ORTHO05D002150 8.9e-09 63.5 79 58.2
CiPaw.04G155300 Carya illinoinensis HOM05D002019 ORTHO05D002150 1.2e-08 63.2 78 57.7
Lj4P371T13 Lonicera japonica HOM05D002019 ORTHO05D002150 1.2e-08 63.2 84 51.2
CiPaw.02G145100 Carya illinoinensis HOM05D002019 ORTHO05D002150 1.5e-08 62.8 97 46.4
Nn8g39043 Nelumbo nucifera HOM05D002019 ORTHO05D002150 1.5e-08 62.8 90 46.7
ClCG08G012070 Citrullus lanatus HOM05D002019 ORTHO05D028946 2.0e-08 62.4 65 50.8
Duzib192G0761 Durio zibethinus HOM05D002019 ORTHO05D002150 2.0e-08 62.4 96 45.8
FvH4_1g06410 Fragaria vesca HOM05D002019 ORTHO05D002150 2.0e-08 62.4 80 53.8
Cpa.g.sc78.30 Carica papaya HOM05D002019 ORTHO05D002150 2.6e-08 62.0 79 55.7
Glyma.01G006000 Glycine max HOM05D002019 ORTHO05D002150 2.6e-08 62.0 92 43.5
Aqoxy7G01383 Aquilegia oxysepala HOM05D002019 ORTHO05D002150 3.4e-08 61.6 100 42.0
Lalb_Chr05g0223301 Lupinus albus HOM05D002019 ORTHO05D002150 4.4e-08 61.2 97 46.4
FAN26G0192 Fragaria x ananassa HOM05D002019 ORTHO05D002150 5.7e-08 60.8 77 54.5
QL05p019670 Quercus lobata HOM05D002019 ORTHO05D002150 5.7e-08 60.8 96 46.9
TPR.G23468 Trifolium pratense HOM05D002019 ORTHO05D002150 5.7e-08 60.8 87 46.0
FAN23G2440 Fragaria x ananassa HOM05D002019 ORTHO05D002150 7.5e-08 60.5 77 54.5
Hund07614 Selenicereus undatus HOM05D002019 ORTHO05D002150 7.5e-08 60.5 39 79.5
CSS0006437 Camellia sinensis var. sinensis HOM05D002019 ORTHO05D002150 9.8e-08 60.1 99 46.5
CSS0034986 Camellia sinensis var. sinensis HOM05D002019 ORTHO05D002150 9.8e-08 60.1 99 46.5
CsaV3_2G030660 Cucumis sativus L. HOM05D002019 ORTHO05D028946 9.8e-08 60.1 65 47.7
FAN28G2283 Fragaria x ananassa HOM05D000606 ORTHO05D002249 9.8e-08 60.1 77 54.5
Psat6g120360 Pisum sativum HOM05D002019 ORTHO05D002150 9.8e-08 60.1 78 50.0
Psat7g017680 Pisum sativum HOM05D002019 ORTHO05D002150 9.8e-08 60.1 87 46.0
COL.COLO4_34724 Corchorus olitorius HOM05D002019 ORTHO05D002150 1.3e-07 59.7 78 50.0
FAN19G1067 Fragaria x ananassa HOM05D002019 ORTHO05D002150 1.3e-07 59.7 80 52.5
Solyc03g121090.4 Solanum lycopersicum HOM05D002019 ORTHO05D002150 1.3e-07 59.7 92 44.6
Sopen03g039920 Solanum pennellii HOM05D002019 ORTHO05D002150 1.3e-07 59.7 92 44.6
VMungo0464G1221 Vigna mungo HOM05D002019 ORTHO05D002150 1.3e-07 59.7 96 43.8
FAN26G2303 Fragaria x ananassa HOM05D002019 ORTHO05D002150 1.7e-07 59.3 66 56.1
Prupe.7G218000 Prunus persica HOM05D002019 ORTHO05D002150 1.7e-07 59.3 84 51.2
Manes.04G135000 Manihot esculenta HOM05D002019 ORTHO05D002150 2.2e-07 58.9 79 53.2
TWI63G0120 Tripterygium wilfordii HOM05D002019 ORTHO05D002150 2.2e-07 58.9 96 49.0
Dinv30427 Davidia involucrata HOM05D002019 ORTHO05D002150 2.8e-07 58.5 82 48.8
Hma1.2p1_0430F.1_g151290 Hydrangea macrophylla HOM05D002019 ORTHO05D002150 2.8e-07 58.5 87 46.0
DCAR_028650 Daucus carota HOM05D002019 ORTHO05D002150 3.7e-07 58.2 86 48.8
Peaxi162Scf00720g10014 Petunia axillaris HOM05D002019 ORTHO05D002150 3.7e-07 58.2 91 45.1
RcHm_v2.0_Chr2g0092151 Rosa chinensis HOM05D002019 ORTHO05D002150 3.7e-07 58.2 77 51.9
Duzib160G0479 Durio zibethinus HOM05D002019 ORTHO05D002150 4.9e-07 57.8 78 46.2
Peaxi162Scf00298g00073 Petunia axillaris HOM05D002019 ORTHO05D002150 4.9e-07 57.8 97 43.3
MELO3C011125.2 Cucumis melo HOM05D002019 ORTHO05D028946 6.3e-07 57.4 65 46.2
Haze_15857 Corylus avellana HOM05D002019 ORTHO05D002150 8.3e-07 57.0 74 52.7
CiPaw.01G230600 Carya illinoinensis HOM05D002019 ORTHO05D002150 1.1e-06 56.6 73 52.1
Medtr6g090460 Medicago truncatula HOM05D002019 ORTHO05D002150 1.4e-06 56.2 95 43.2
Nn6g35346 Nelumbo nucifera HOM05D002019 ORTHO05D002150 1.4e-06 56.2 82 48.8
Nitab4.5_0004673g0030 Nicotiana tabacum HOM05D002019 ORTHO05D002150 1.4e-06 56.2 94 44.7
PGSC0003DMG400002524 Solanum tuberosum HOM05D002019 ORTHO05D002150 1.4e-06 56.2 73 50.7
TPR.G33508 Trifolium pratense HOM05D002019 ORTHO05D002150 1.4e-06 56.2 96 42.7
Lsat_1_v5_gn_8_86961 Lactuca sativa HOM05D002019 ORTHO05D002150 1.8e-06 55.8 87 42.5
Sc12g0010130 Simmondsia chinensis HOM05D002019 ORTHO05D002150 1.8e-06 55.8 89 43.8
BcaB05g22285 Brassica carinata HOM05D002019 ORTHO05D002150 2.4e-06 55.5 81 48.1
Lj2g0020183 Lotus japonicus HOM05D002019 ORTHO05D002150 2.4e-06 55.5 95 42.1
Hund00702 Selenicereus undatus HOM05D002019 ORTHO05D002150 2.4e-06 55.5 93 46.2
CsaV3_1G039920 Cucumis sativus L. HOM05D002019 ORTHO05D002150 3.1e-06 55.1 76 48.7
Psat7g017640 Pisum sativum HOM05D002019 ORTHO05D002150 3.1e-06 55.1 73 49.3
BcaB01g04407 Brassica carinata HOM05D002019 ORTHO05D002150 4.1e-06 54.7 83 49.4
MELO3C015423.2 Cucumis melo HOM05D002019 ORTHO05D002150 4.1e-06 54.7 76 48.7
Lj4g0009291 Lotus japonicus HOM05D002019 ORTHO05D002150 4.1e-06 54.7 73 47.9
Manes.03G027900 Manihot esculenta HOM05D002019 ORTHO05D002150 4.1e-06 54.7 89 44.9
Medtr8g102350 Medicago truncatula HOM05D002019 ORTHO05D002150 4.1e-06 54.7 68 51.5
SalBow2G0787 Salvia bowleyana HOM05D002019 ORTHO05D002150 4.1e-06 54.7 73 46.6
Sed0009773 Sechium edule HOM05D002019 ORTHO05D002150 4.1e-06 54.7 89 43.8
CSS0029504 Camellia sinensis var. sinensis HOM05D002019 ORTHO05D002150 5.4e-06 54.3 100 40.0
Duzib150G0515 Durio zibethinus HOM05D002019 ORTHO05D002150 5.4e-06 54.3 79 50.6
Nitab4.5_0004969g0050 Nicotiana tabacum HOM05D002019 ORTHO05D002150 5.4e-06 54.3 76 47.4
CAN.G1143.19 Capsicum annuum HOM05D002019 ORTHO05D002150 7.0e-06 53.9 73 47.9
ECA234G2222 Erigeron canadensis HOM05D002019 ORTHO05D002150 7.0e-06 53.9 73 46.6
Thhalv10014792m.g Eutrema salsugineum HOM05D002019 ORTHO05D002150 7.0e-06 53.9 83 51.8
Oeu060671.1 Olea europaea HOM05D002019 ORTHO05D002150 7.0e-06 53.9 73 46.6
Actinidia39130 Actinidia chinensis HOM05D002019 ORTHO05D002150 9.2e-06 53.5 99 43.4
C03p15590 Brassica napus HOM05D002019 ORTHO05D002150 9.2e-06 53.5 81 51.9
BolC3t13996H Brassica oleracea HOM05D002019 ORTHO05D002150 9.2e-06 53.5 81 51.9


User provided reference genes

Program Settings