Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017759 Camellia sinensis var. sinensis HOM05D004819 ORTHO05D005654 6.8e-90 334.0 167 100.0
CSS0032110 Camellia sinensis var. sinensis HOM05D004819 ORTHO05D005654 3.4e-81 305.1 167 93.4
CSS0034063 Camellia sinensis var. sinensis HOM05D004819 ORTHO05D005654 4.8e-67 258.1 166 81.9
Dinv15153 Davidia involucrata HOM05D004819 ORTHO05D005654 2.9e-56 222.2 166 71.1
Oeu052162.4 Olea europaea HOM05D004819 ORTHO05D005654 4.9e-56 221.5 166 68.1
Oeu046577.1 Olea europaea HOM05D004819 ORTHO05D005654 6.4e-56 221.1 166 67.5
SalBow8G2376 Salvia bowleyana HOM05D004819 ORTHO05D005654 8.4e-56 220.7 166 66.3
TAR365G0460 Trochodendron aralioides HOM05D004819 ORTHO05D005654 3.2e-55 218.8 166 69.3
DCAR_030463 Daucus carota HOM05D004819 ORTHO05D005654 4.2e-55 218.4 166 68.7
GSVIVG01034978001 Vitis vinifera HOM05D004819 ORTHO05D005654 9.3e-55 217.2 166 67.5
Haze_01312 Corylus avellana HOM05D004819 ORTHO05D005654 2.1e-54 216.1 166 68.7
Nitab4.5_0000931g0050 Nicotiana tabacum HOM05D004819 ORTHO05D005654 2.7e-54 215.7 166 67.5
Actinidia40384 Actinidia chinensis HOM05D004819 ORTHO05D005654 3.5e-54 215.3 168 69.0
Cfa015302 Carpinus fangiana HOM05D004819 ORTHO05D005654 3.5e-54 215.3 166 68.1
Rhsim04G0240100 Rhododendron simsii HOM05D004819 ORTHO05D005654 3.5e-54 215.3 166 69.3
vmacro08030 Vaccinium macrocarpon HOM05D004819 ORTHO05D005654 4.6e-54 214.9 166 68.7
Migut.G00071 Erythranthe guttata HOM05D004819 ORTHO05D005654 7.9e-54 214.2 166 64.5
Peaxi162Scf00228g00333 Petunia axillaris HOM05D004819 ORTHO05D005654 7.9e-54 214.2 166 66.9
Ciclev10004336m.g Citrus clementina HOM05D004819 ORTHO05D005654 1.8e-53 213.0 166 66.9
Nn2g14951 Nelumbo nucifera HOM05D004819 ORTHO05D005654 3.0e-53 212.2 166 66.9
CiPaw.01G137100 Carya illinoinensis HOM05D004819 ORTHO05D005654 3.9e-53 211.8 166 67.5
Cc03_g00710 Coffea canephora HOM05D004819 ORTHO05D005654 6.7e-53 211.1 166 66.3
Nn4g25546 Nelumbo nucifera HOM05D004819 ORTHO05D005654 8.7e-53 210.7 166 65.7
Atru.chr4.3039 Acer truncatum HOM05D004819 ORTHO05D005654 1.5e-52 209.9 166 64.5
Manes.03G205800 Manihot esculenta HOM05D004819 ORTHO05D005654 1.5e-52 209.9 168 64.9
Sopen01g024570 Solanum pennellii HOM05D004819 ORTHO05D005654 1.9e-52 209.5 166 64.5
PGR004G0637 Punica granatum HOM05D004819 ORTHO05D005654 2.5e-52 209.1 166 66.3
SGA_v2.0_scaffold104G30069 Striga asiatica HOM05D004819 ORTHO05D005654 2.5e-52 209.1 168 63.1
TWI09G1587 Tripterygium wilfordii HOM05D004819 ORTHO05D005654 3.3e-52 208.8 166 65.1
QL06p012610 Quercus lobata HOM05D004819 ORTHO05D005654 4.3e-52 208.4 166 66.3
PGSC0003DMG400001205 Solanum tuberosum HOM05D004819 ORTHO05D005654 4.3e-52 208.4 166 64.5
MD16G1152500 Malus domestica HOM05D004819 ORTHO05D005654 5.6e-52 208.0 166 65.7
TWI53G0610 Tripterygium wilfordii HOM05D004819 ORTHO05D005654 5.6e-52 208.0 166 65.7
Aqoxy2G02702 Aquilegia oxysepala HOM05D004819 ORTHO05D005654 7.4e-52 207.6 166 66.3
Prupe.1G115700 Prunus persica HOM05D004819 ORTHO05D005654 1.3e-51 206.8 166 64.5
Solyc01g058730.4 Solanum lycopersicum HOM05D004819 ORTHO05D005654 1.3e-51 206.8 166 65.7
THA.LOC104802608 Tarenaya hassleriana HOM05D004819 ORTHO05D005654 1.3e-51 206.8 166 65.1
MSTRG.10156 Avicennia marina HOM05D004819 ORTHO05D005654 2.1e-51 206.1 166 61.4
CANSAT78G1713 Cannabis sativa HOM05D004819 ORTHO05D005654 3.7e-51 205.3 166 64.5
Gohir.D10G179600 Gossypium hirsutum HOM05D004819 ORTHO05D005654 3.7e-51 205.3 166 65.1
Sc09g0007260 Simmondsia chinensis HOM05D004819 ORTHO05D005654 3.7e-51 205.3 166 62.7
Thecc.04G302500 Theobroma cacao HOM05D004819 ORTHO05D005654 4.8e-51 204.9 166 65.7
Gohir.A10G173100 Gossypium hirsutum HOM05D004819 ORTHO05D005654 6.2e-51 204.5 166 64.5
Gorai.011G200900 Gossypium raimondii HOM05D004819 ORTHO05D005654 6.2e-51 204.5 166 65.1
Ca_21436_v3 Cicer arietinum L. HOM05D004819 ORTHO05D005654 8.2e-51 204.1 166 63.9
FvH4_4g19930 Fragaria vesca HOM05D004819 ORTHO05D005654 8.2e-51 204.1 166 64.5
BcaNung00215 Brassica carinata HOM05D004819 ORTHO05D005654 1.4e-50 203.4 166 63.9
FAN07G2526 Fragaria x ananassa HOM05D004819 ORTHO05D005654 1.8e-50 203.0 166 63.9
FAN12G0990 Fragaria x ananassa HOM05D004819 ORTHO05D005654 1.8e-50 203.0 166 63.9
PSO761G0636 Papaver somniferum HOM05D004819 ORTHO05D005654 2.4e-50 202.6 166 65.1
BcaC09g50317 Brassica carinata HOM05D004819 ORTHO05D005654 3.1e-50 202.2 166 63.3
C01p26720 Brassica napus HOM05D004819 ORTHO05D005654 3.1e-50 202.2 166 63.3
A03p49650 Brassica napus HOM05D004819 ORTHO05D005654 4.0e-50 201.8 166 63.9
BraA03t14064Z Brassica rapa HOM05D004819 ORTHO05D005654 4.0e-50 201.8 166 63.9
Aa31LG10G5910 Aethionema arabicum HOM05D004819 ORTHO05D005654 5.3e-50 201.4 166 64.5
BcaC06g33458 Brassica carinata HOM05D004819 ORTHO05D005654 5.3e-50 201.4 166 63.3
BolC7t45297H Brassica oleracea HOM05D004819 ORTHO05D005654 5.3e-50 201.4 166 63.3
Eucgr.H04055 Eucalyptus grandis HOM05D004819 ORTHO05D005654 5.3e-50 201.4 166 64.5
Duzib212G0926 Durio zibethinus HOM05D004819 ORTHO05D005654 6.9e-50 201.1 166 64.5
Lj3C833T2 Lonicera japonica HOM05D004819 ORTHO05D005654 6.9e-50 201.1 167 64.1
RcHm_v2.0_Chr4g0425571 Rosa chinensis HOM05D004819 ORTHO05D005654 6.9e-50 201.1 166 63.3
A01p21370 Brassica napus HOM05D004819 ORTHO05D005654 9.0e-50 200.7 166 62.7
C07p47720 Brassica napus HOM05D004819 ORTHO05D005654 9.0e-50 200.7 166 62.7
BolC1t02613H Brassica oleracea HOM05D004819 ORTHO05D005654 9.0e-50 200.7 166 62.7
BraA01t02042Z Brassica rapa HOM05D004819 ORTHO05D005654 9.0e-50 200.7 166 62.7
PSO210G2958 Papaver somniferum HOM05D004819 ORTHO05D005654 9.0e-50 200.7 166 64.5
BcaC06g32994 Brassica carinata HOM05D004819 ORTHO05D005654 1.2e-49 200.3 166 62.7
ClCG05G006610 Citrullus lanatus HOM05D004819 ORTHO05D005654 1.2e-49 200.3 166 63.9
Glyma.07G238900 Glycine max HOM05D004819 ORTHO05D005654 1.2e-49 200.3 166 63.9
TPR.G25430 Trifolium pratense HOM05D004819 ORTHO05D005654 1.5e-49 199.9 166 62.0
AT4G16180 Arabidopsis thaliana HOM05D004819 ORTHO05D005654 2.0e-49 199.5 166 62.7
Sp7g14690 Schrenkiella parvula HOM05D004819 ORTHO05D005654 2.0e-49 199.5 166 62.0
Phvul.003G115600 Phaseolus vulgaris HOM05D004819 ORTHO05D005654 2.6e-49 199.1 166 63.3
Lj4g0007943 Lotus japonicus HOM05D004819 ORTHO05D005654 4.5e-49 198.4 166 62.0
MELO3C006720.2 Cucumis melo HOM05D004819 ORTHO05D005654 5.8e-49 198.0 166 62.7
Lalb_Chr07g0182051 Lupinus albus HOM05D004819 ORTHO05D005654 5.8e-49 198.0 166 61.4
VMungo1215G1911 Vigna mungo HOM05D004819 ORTHO05D005654 5.8e-49 198.0 166 63.3
Carub.0007s2536 Capsella rubella HOM05D004819 ORTHO05D005654 7.6e-49 197.6 166 61.4
Thhalv10024420m.g Eutrema salsugineum HOM05D004819 ORTHO05D005654 7.6e-49 197.6 166 62.0
AL7G38910 Arabidopsis lyrata HOM05D004819 ORTHO05D005654 1.3e-48 196.8 166 62.0
CARHR222550 Cardamine hirsuta HOM05D004819 ORTHO05D005654 2.9e-48 195.7 166 60.2
CsaV3_3G015230 Cucumis sativus L. HOM05D004819 ORTHO05D005654 2.9e-48 195.7 166 62.0
arahy.Tifrunner.gnm1.ann1.HD9JLY Arachis hypogaea HOM05D004819 ORTHO05D005654 3.8e-48 195.3 166 62.0
CDE02G0522 Ceratophyllum demersum HOM05D004819 ORTHO05D005654 3.8e-48 195.3 168 61.3
ATR0693G033 Amborella trichopoda HOM05D004819 ORTHO05D005654 6.5e-48 194.5 166 62.0
Glyma.17G034800 Glycine max HOM05D004819 ORTHO05D005654 6.5e-48 194.5 166 62.0
arahy.Tifrunner.gnm1.ann1.ZA4S8T Arachis hypogaea HOM05D004819 ORTHO05D005654 8.4e-48 194.1 166 61.4
Sed0001798 Sechium edule HOM05D004819 ORTHO05D005654 1.1e-47 193.7 166 62.7
AUR62016223 Chenopodium quinoa HOM05D004819 ORTHO05D005654 5.5e-47 191.4 166 60.2
Sed0007022 Sechium edule HOM05D004819 ORTHO05D005654 7.1e-47 191.0 166 60.8
Potri.010G146800 Populus trichocarpa HOM05D004819 ORTHO05D005654 9.3e-47 190.7 166 60.2
AUR62039265 Chenopodium quinoa HOM05D004819 ORTHO05D005654 1.2e-46 190.3 166 59.6
Psat4g022840 Pisum sativum HOM05D004819 ORTHO05D005654 1.2e-46 190.3 166 59.0
HanXRQChr02g0048601 Helianthus annuus HOM05D004819 ORTHO05D005654 2.1e-46 189.5 166 59.6
ECA233G5711 Erigeron canadensis HOM05D004819 ORTHO05D005654 3.5e-46 188.7 167 59.9
Lsat_1_v5_gn_6_1101 Lactuca sativa HOM05D004819 ORTHO05D005654 4.6e-46 188.3 166 59.0
Sabra10G0113000 Salix brachista HOM05D004819 ORTHO05D005654 4.6e-46 188.3 166 59.0
Ah.05g176730 Amaranthus hybridus HOM05D004819 ORTHO05D005654 7.9e-46 187.6 166 58.4
Manes.15G000800 Manihot esculenta HOM05D004819 ORTHO05D005654 1.0e-45 187.2 169 60.4
Hund03132 Selenicereus undatus HOM05D004819 ORTHO05D005654 4.3e-44 181.8 167 58.1
EL10Ac3g05522 Beta vulgaris HOM05D004819 ORTHO05D005654 9.7e-44 180.6 166 56.6
Zm00001eb014900 Zea mays HOM05D004819 ORTHO05D005654 4.1e-42 175.3 166 57.2
Cpa.g.sc9.47 Carica papaya HOM05D004819 ORTHO05D005654 5.3e-42 174.9 167 58.7
SHI00126 Sapria himalayana HOM05D004819 ORTHO05D005654 5.9e-41 171.4 165 55.2
COL.COLO4_34600 Corchorus olitorius HOM05D004819 ORTHO05D005654 7.6e-41 171.0 166 56.6
HanXRQChr11g0353871 Helianthus annuus HOM05D004819 ORTHO05D005654 1.4e-39 166.8 166 55.4
Eucgr.H04185 Eucalyptus grandis HOM05D004819 ORTHO05D005654 1.2e-38 163.7 166 55.4
Lsat_1_v5_gn_1_41600 Lactuca sativa HOM05D004819 ORTHO05D005654 3.6e-38 162.2 169 53.8
Nitab4.5_0000177g0090 Nicotiana tabacum HOM05D004819 ORTHO05D005654 9.7e-36 154.1 166 51.2
Mapoly0066s0100 Marchantia polymorpha HOM05D004819 ORTHO05D005654 1.6e-30 136.7 170 45.9
EL10Ac4g08939 Beta vulgaris HOM05D004819 ORTHO05D005654 3.9e-29 132.1 89 69.7
Rhsim05G0134500 Rhododendron simsii HOM05D004819 ORTHO05D005654 2.6e-28 129.4 77 83.1
AagrBONN_evm.TU.Sc2ySwM_362.583 Anthoceros agrestis HOM05D004819 ORTHO05D005654 6.5e-24 114.8 167 41.9
Pp3c16_6520 Physcomitrium patens HOM05D004819 ORTHO05D005654 2.5e-23 112.8 172 39.0
SMO298G0056 Selaginella moellendorffii HOM05D004819 ORTHO05D005654 4.2e-23 112.1 170 43.5
Pp3c5_14560 Physcomitrium patens HOM05D004819 ORTHO05D005654 3.6e-22 109.0 171 36.3
Nn2g14956 Nelumbo nucifera HOM05D004819 ORTHO05D005654 1.0e-21 107.5 105 56.2
Sabra15G0067600 Salix brachista HOM05D004819 ORTHO05D005654 6.3e-19 98.2 110 50.9
unitig_88.g27704 Utricularia gibba HOM05D002812 ORTHO05D005654 2.2e-16 89.7 107 45.8
SEGI_30135 Sequoiadendron giganteum HOM05D004819 ORTHO05D005654 5.0e-16 88.6 107 48.6
CBR_g61507 Chara braunii HOM05D004819 ORTHO05D005654 1.2e-14 84.0 89 46.1
HPP92_005424 Vanilla planifolia HOM05D004819 ORTHO05D005654 5.2e-13 78.6 89 51.7
PGSC0003DMG402014601 Solanum tuberosum HOM05D004819 ORTHO05D005654 4.4e-12 75.5 52 65.4
MCO15G339 Micromonas commoda HOM05D004819 ORTHO05D005654 3.7e-11 72.4 95 38.9


User provided reference genes

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