Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017730 Camellia sinensis var. sinensis HOM05D007459 ORTHO05D009234 1.7e-91 339.3 174 100.0
Hma1.2p1_2359F.1_g320593 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 3.2e-66 255.4 174 74.7
Hma1.2p1_0554F.1_g177940 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 4.6e-65 251.5 174 73.6
Dinv44169 Davidia involucrata HOM05D007459 ORTHO05D009234 1.3e-59 233.4 172 69.8
TAR362G1157 Trochodendron aralioides HOM05D007459 ORTHO05D009234 8.2e-54 214.2 174 64.9
Nn1g09730 Nelumbo nucifera HOM05D007459 ORTHO05D009234 2.4e-53 212.6 172 61.6
Haze_01404 Corylus avellana HOM05D007459 ORTHO05D009234 2.6e-52 209.1 174 64.4
QL10p052586 Quercus lobata HOM05D007459 ORTHO05D009234 7.7e-52 207.6 175 62.3
Rhsim09G0013300 Rhododendron simsii HOM05D007459 ORTHO05D009234 1.3e-51 206.8 175 60.6
CiPaw.01G173000 Carya illinoinensis HOM05D007459 ORTHO05D009234 1.7e-51 206.5 175 60.0
Cfa015229 Carpinus fangiana HOM05D007459 ORTHO05D009234 2.9e-51 205.7 175 64.0
Cc03_g12180 Coffea canephora HOM05D007459 ORTHO05D009234 2.9e-51 205.7 179 60.9
Nitab4.5_0013525g0010 Nicotiana tabacum HOM05D007459 ORTHO05D009234 3.8e-51 205.3 174 61.5
vmacro06567 Vaccinium macrocarpon HOM05D007459 ORTHO05D009234 5.0e-51 204.9 177 61.0
Haze_01410 Corylus avellana HOM05D007459 ORTHO05D009234 2.5e-50 202.6 174 63.2
MD04G1047100 Malus domestica HOM05D007459 ORTHO05D009234 7.2e-50 201.1 174 62.1
Lj6A129T18 Lonicera japonica HOM05D007459 ORTHO05D009234 9.4e-50 200.7 173 61.3
Nitab4.5_0002553g0080 Nicotiana tabacum HOM05D007459 ORTHO05D009234 2.7e-49 199.1 172 61.0
MELO3C017778.2 Cucumis melo HOM05D007459 ORTHO05D009234 4.7e-49 198.4 174 60.9
Solyc06g073170.1 Solanum lycopersicum HOM05D007459 ORTHO05D009234 6.1e-49 198.0 172 61.6
RcHm_v2.0_Chr2g0138101 Rosa chinensis HOM05D007459 ORTHO05D009234 8.0e-49 197.6 171 57.9
Ciclev10022478m.g Citrus clementina HOM05D007459 ORTHO05D009234 2.3e-48 196.1 183 57.4
Sopen06g029540 Solanum pennellii HOM05D007459 ORTHO05D009234 3.0e-48 195.7 172 61.0
Prupe.1G201700 Prunus persica HOM05D007459 ORTHO05D009234 3.9e-48 195.3 174 60.9
PGSC0003DMG400027018 Solanum tuberosum HOM05D007459 ORTHO05D009234 1.1e-47 193.7 172 59.9
Thecc.04G171000 Theobroma cacao HOM05D007459 ORTHO05D009234 1.5e-47 193.4 172 57.0
Duzib151G0483 Durio zibethinus HOM05D007459 ORTHO05D009234 3.3e-47 192.2 171 56.7
CANSAT56G1213 Cannabis sativa HOM05D007459 ORTHO05D009234 7.4e-47 191.0 171 56.1
Manes.04G050800 Manihot esculenta HOM05D007459 ORTHO05D009234 7.4e-47 191.0 174 55.2
Sed0000488 Sechium edule HOM05D007459 ORTHO05D009234 9.7e-47 190.7 174 58.0
Peaxi162Scf00180g00063 Petunia axillaris HOM05D007459 ORTHO05D009234 1.3e-46 190.3 172 57.6
PGR142G0909 Punica granatum HOM05D007459 ORTHO05D009234 1.4e-45 186.8 173 59.5
CsaV3_4G002640 Cucumis sativus L. HOM05D007459 ORTHO05D009234 2.4e-45 186.0 167 58.7
AL4G42340 Arabidopsis lyrata HOM05D007459 ORTHO05D009234 3.1e-45 185.7 172 55.2
C04p70510 Brassica napus HOM05D007459 ORTHO05D009234 9.1e-45 184.1 172 54.1
Carub.0004s2600 Capsella rubella HOM05D007459 ORTHO05D009234 1.2e-44 183.7 175 53.1
A04p32820 Brassica napus HOM05D007459 ORTHO05D009234 1.6e-44 183.3 172 54.7
BraA04t18744Z Brassica rapa HOM05D007459 ORTHO05D009234 1.6e-44 183.3 172 54.7
Thhalv10001662m.g Eutrema salsugineum HOM05D007459 ORTHO05D009234 2.6e-44 182.6 172 53.5
BcaC02g07169 Brassica carinata HOM05D007459 ORTHO05D009234 3.5e-44 182.2 172 54.7
BcaC02g07170 Brassica carinata HOM05D007459 ORTHO05D009234 3.5e-44 182.2 172 54.7
BolC4t28553H Brassica oleracea HOM05D007459 ORTHO05D009234 3.5e-44 182.2 172 54.7
THA.LOC104805901 Tarenaya hassleriana HOM05D007459 ORTHO05D009234 3.5e-44 182.2 176 54.5
Actinidia27099 Actinidia chinensis HOM05D007459 ORTHO05D009234 4.5e-44 181.8 145 64.8
Gohir.D02G110600 Gossypium hirsutum HOM05D007459 ORTHO05D009234 5.9e-44 181.4 173 56.6
Gohir.A02G092500 Gossypium hirsutum HOM05D007459 ORTHO05D009234 7.7e-44 181.0 173 56.1
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 1.0e-43 180.6 171 55.0
BcaB06g29324 Brassica carinata HOM05D007459 ORTHO05D009234 1.0e-43 180.6 172 53.5
Potri.007G134400 Populus trichocarpa HOM05D007459 ORTHO05D009234 1.0e-43 180.6 176 52.8
Atru.chr4.1350 Acer truncatum HOM05D007459 ORTHO05D009234 2.2e-43 179.5 176 54.5
Haze_01399 Corylus avellana HOM05D007459 ORTHO05D009234 2.2e-43 179.5 163 60.7
CARHR138660 Cardamine hirsuta HOM05D007459 ORTHO05D009234 2.9e-43 179.1 172 53.5
Gorai.005G125500 Gossypium raimondii HOM05D007459 ORTHO05D009234 2.9e-43 179.1 173 56.1
SGA_v2.0_scaffold25G10994 Striga asiatica HOM05D007459 ORTHO05D009234 5.0e-43 178.3 171 55.0
Sp4g25650 Schrenkiella parvula HOM05D007459 ORTHO05D009234 1.5e-42 176.8 174 52.3
Lsat_1_v5_gn_8_158021 Lactuca sativa HOM05D007459 ORTHO05D009234 5.5e-42 174.9 174 52.9
Lalb_Chr22g0352011 Lupinus albus HOM05D007459 ORTHO05D009234 5.5e-42 174.9 174 54.6
AT2G43540 Arabidopsis thaliana HOM05D007459 ORTHO05D009234 7.2e-42 174.5 171 52.0
COL.COLO4_28394 Corchorus olitorius HOM05D007459 ORTHO05D009234 9.4e-42 174.1 173 53.8
Sabra07G0109100 Salix brachista HOM05D007459 ORTHO05D009234 1.2e-41 173.7 176 50.6
Sc06g0007410 Simmondsia chinensis HOM05D007459 ORTHO05D009234 3.6e-41 172.2 172 54.7
BolC4t28554H Brassica oleracea HOM05D007459 ORTHO05D009234 6.1e-41 171.4 161 54.0
FvH4_6g31340 Fragaria vesca HOM05D007459 ORTHO05D009234 6.1e-41 171.4 171 54.4
FAN14G2685 Fragaria x ananassa HOM05D007459 ORTHO05D009234 6.1e-41 171.4 171 54.4
FAN05G5726 Fragaria x ananassa HOM05D007459 ORTHO05D009234 1.4e-40 170.2 171 54.4
Lj3g0013618 Lotus japonicus HOM05D007459 ORTHO05D009234 1.8e-40 169.9 174 50.6
C04p70520 Brassica napus HOM05D007459 ORTHO05D009234 2.3e-40 169.5 161 54.0
Ca_01236_v3 Cicer arietinum L. HOM05D007459 ORTHO05D009234 3.0e-40 169.1 174 51.1
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 4.0e-40 168.7 164 54.9
HanXRQChr14g0433791 Helianthus annuus HOM05D007459 ORTHO05D009234 5.2e-40 168.3 174 51.1
TWI38G0757 Tripterygium wilfordii HOM05D007459 ORTHO05D009234 8.8e-40 167.5 161 53.4
Migut.N03078 Erythranthe guttata HOM05D007459 ORTHO05D009234 1.5e-39 166.8 171 54.4
unitig_85.g27223 Utricularia gibba HOM05D007459 ORTHO05D009234 5.7e-39 164.9 174 48.9
TPR.G6565 Trifolium pratense HOM05D007459 ORTHO05D009234 1.3e-38 163.7 172 50.6
TPR.G13012 Trifolium pratense HOM05D007459 ORTHO05D009234 4.8e-38 161.8 174 49.4
Medtr2g099440 Medicago truncatula HOM05D007459 ORTHO05D009234 4.5e-36 155.2 174 47.7
Psat5g291760 Pisum sativum HOM05D007459 ORTHO05D009234 1.0e-35 154.1 174 50.6
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 1.3e-35 153.7 146 54.1
HPP92_004524 Vanilla planifolia HOM05D007459 ORTHO05D009234 5.0e-35 151.8 171 49.1
Phvul.005G155700 Phaseolus vulgaris HOM05D007459 ORTHO05D009234 1.9e-34 149.8 170 48.8
DCAR_028411 Daucus carota HOM05D007459 ORTHO05D009234 3.2e-34 149.1 170 49.4
Glyma.13G346600 Glycine max HOM05D007459 ORTHO05D009234 4.0e-32 142.1 167 49.7
AUR62023818 Chenopodium quinoa HOM05D007459 ORTHO05D009234 6.8e-32 141.4 172 48.8
EL10Ac3g06032 Beta vulgaris HOM05D007459 ORTHO05D009234 2.0e-31 139.8 172 46.5
AUR62002368 Chenopodium quinoa HOM05D007459 ORTHO05D009234 5.7e-31 138.3 172 47.1
ATR0743G068 Amborella trichopoda HOM05D007459 ORTHO05D009234 9.8e-31 137.5 174 45.4
Os04g0495300 Oryza sativa ssp. japonica HOM05D007459 ORTHO05D009234 9.8e-31 137.5 171 45.0
ClCG07G015090 Citrullus lanatus HOM05D007459 ORTHO05D009234 1.3e-30 137.1 174 47.1
CDE09G0571 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 2.8e-30 136.0 143 48.3
HPP92_004533 Vanilla planifolia HOM05D007459 ORTHO05D009234 3.8e-27 125.6 134 51.5
Zm00001eb078650 Zea mays HOM05D007459 ORTHO05D009234 3.3e-26 122.5 171 42.7
Duzib151G0582 Durio zibethinus HOM05D007459 ORTHO05D009234 6.1e-25 118.2 123 47.2
Ah.07g202500 Amaranthus hybridus HOM05D007459 ORTHO05D009234 1.8e-24 116.7 172 44.2
Eucgr.L02147 Eucalyptus grandis HOM05D007459 ORTHO05D009234 1.7e-22 110.2 152 45.4
EL10Ac9g22812 Beta vulgaris HOM05D007459 ORTHO05D009234 1.6e-20 103.6 154 43.5
EL10Ac4g10228 Beta vulgaris HOM05D007459 ORTHO05D009234 1.1e-18 97.4 143 38.5
EL10Ac5g11171 Beta vulgaris HOM05D007459 ORTHO05D009234 3.6e-17 92.4 120 45.8
Pp3c17_9330 Physcomitrium patens HOM05D007459 ORTHO05D009234 2.3e-11 73.2 179 31.3
EL10Ac6g13927 Beta vulgaris HOM05D000045 ORTHO05D010054 5.0e-11 72.0 71 53.5
Mapoly0038s0008 Marchantia polymorpha HOM05D007459 ORTHO05D009234 8.6e-11 71.2 179 28.5
Pp3c3_12780 Physcomitrium patens HOM05D007459 ORTHO05D009234 9.5e-10 67.8 175 29.7
SEGI_40343 Sequoiadendron giganteum HOM05D007459 ORTHO05D009234 9.5e-10 67.8 136 32.4
ECA238G4467 Erigeron canadensis HOM05D007459 ORTHO05D009234 8.9e-08 61.2 74 47.3
EL10Ac3g06136 Beta vulgaris HOM05D007459 ORTHO05D009234 4.4e-07 58.9 79 41.8


User provided reference genes

Program Settings