Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017710 Camellia sinensis var. sinensis HOM05D003299 ORTHO05D003811 6.4e-40 166.8 74 100.0
CSS0049751 Camellia sinensis var. sinensis HOM05D003299 ORTHO05D003811 2.6e-09 65.1 72 51.4
Sabra08G0024500 Salix brachista HOM05D003299 ORTHO05D003811 3.4e-09 64.7 73 52.1
GSVIVG01016235001 Vitis vinifera HOM05D003299 ORTHO05D003811 4.5e-09 64.3 72 50.0
Eucgr.J01067 Eucalyptus grandis HOM05D003299 ORTHO05D003811 5.8e-09 63.9 74 51.4
Hma1.2p1_0438F.1_g153110 Hydrangea macrophylla HOM05D003299 ORTHO05D003811 5.8e-09 63.9 74 50.0
SGA_v2.0_scaffold51G18707 Striga asiatica HOM05D003299 ORTHO05D003811 5.8e-09 63.9 74 51.4
DCAR_019092 Daucus carota HOM05D003299 ORTHO05D003811 7.6e-09 63.5 58 58.6
ECA232G0110 Erigeron canadensis HOM05D003299 ORTHO05D003811 1.3e-08 62.8 60 58.3
Migut.F01723 Erythranthe guttata HOM05D003299 ORTHO05D003811 1.3e-08 62.8 74 50.0
Nitab4.5_0004385g0010 Nicotiana tabacum HOM05D003299 ORTHO05D003811 1.3e-08 62.8 58 55.2
CAN.G321.39 Capsicum annuum HOM05D003299 ORTHO05D003811 1.7e-08 62.4 71 49.3
QL05p048812 Quercus lobata HOM05D003299 ORTHO05D014176 1.7e-08 62.4 79 46.8
Actinidia06742 Actinidia chinensis HOM05D003299 ORTHO05D003811 2.2e-08 62.0 74 51.4
Aqoxy2G01795 Aquilegia oxysepala HOM05D003299 ORTHO05D003811 2.2e-08 62.0 74 48.6
Gohir.A05G294600 Gossypium hirsutum HOM05D003299 ORTHO05D003811 2.2e-08 62.0 74 50.0
QL08p054943 Quercus lobata HOM05D003299 ORTHO05D003811 2.2e-08 62.0 62 54.8
vmacro07125 Vaccinium macrocarpon HOM05D003299 ORTHO05D003811 2.2e-08 62.0 74 50.0
Solyc11g008450.2 Solanum lycopersicum HOM05D003299 ORTHO05D003811 2.9e-08 61.6 72 48.6
Sopen11g004240 Solanum pennellii HOM05D003299 ORTHO05D003811 2.9e-08 61.6 72 48.6
PGSC0003DMG400007425 Solanum tuberosum HOM05D003299 ORTHO05D003811 2.9e-08 61.6 72 48.6
MSTRG.8135 Avicennia marina HOM05D003299 ORTHO05D003811 3.8e-08 61.2 72 48.6
Gohir.D05G295200 Gossypium hirsutum HOM05D003299 ORTHO05D003811 3.8e-08 61.2 72 48.6
Nitab4.5_0004325g0060 Nicotiana tabacum HOM05D003299 ORTHO05D003811 6.5e-08 60.5 56 55.4
Peaxi162Scf00296g00715 Petunia axillaris HOM05D003299 ORTHO05D003811 6.5e-08 60.5 66 50.0
Potri.008G036400 Populus trichocarpa HOM05D003299 ORTHO05D003811 6.5e-08 60.5 72 48.6
Thecc.10G079700 Theobroma cacao HOM05D003299 ORTHO05D003811 8.4e-08 60.1 72 48.6
Gorai.009G311900 Gossypium raimondii HOM05D003299 ORTHO05D003811 1.1e-07 59.7 72 47.2
HanXRQChr09g0246861 Helianthus annuus HOM05D003299 ORTHO05D003811 1.1e-07 59.7 72 48.6
Lsat_1_v5_gn_9_68280 Lactuca sativa HOM05D003299 ORTHO05D003811 1.4e-07 59.3 56 58.9
Rhsim03G0117200 Rhododendron simsii HOM05D003299 ORTHO05D003811 1.9e-07 58.9 58 58.6
TAR623G0928 Trochodendron aralioides HOM05D003299 ORTHO05D003811 3.2e-07 58.2 72 44.4
Atru.chr12.828 Acer truncatum HOM05D003299 ORTHO05D003811 4.2e-07 57.8 69 50.7
CiPaw.01G270000 Carya illinoinensis HOM05D003299 ORTHO05D003811 5.5e-07 57.4 72 47.2
Glyma.02G161200 Glycine max HOM05D003299 ORTHO05D003811 5.5e-07 57.4 68 50.0
Phvul.007G239200 Phaseolus vulgaris HOM05D003299 ORTHO05D003811 5.5e-07 57.4 72 47.2
RcHm_v2.0_Chr1g0362831 Rosa chinensis HOM05D003299 ORTHO05D003811 5.5e-07 57.4 72 47.2
TWI63G0314 Tripterygium wilfordii HOM05D003299 ORTHO05D003811 5.5e-07 57.4 74 47.3
Medtr1g050322 Medicago truncatula HOM05D003299 ORTHO05D003811 7.1e-07 57.0 72 47.2
Psat6g094000 Pisum sativum HOM05D003299 ORTHO05D003811 9.3e-07 56.6 72 47.2
Duzib114G0224 Durio zibethinus HOM05D003299 ORTHO05D003811 1.2e-06 56.2 58 55.2
MD01G1104800 Malus domestica HOM05D003299 ORTHO05D003811 1.2e-06 56.2 72 45.8
Ciclev10032804m.g Citrus clementina HOM05D003299 ORTHO05D003811 1.6e-06 55.8 74 47.3
PSO339G5755 Papaver somniferum HOM05D003299 ORTHO05D003811 1.6e-06 55.8 74 44.6
ATR0680G138 Amborella trichopoda HOM05D003299 ORTHO05D003811 2.1e-06 55.5 58 53.4
Dinv31216 Davidia involucrata HOM05D003299 ORTHO05D003811 2.1e-06 55.5 58 53.4
Lj6g0007833 Lotus japonicus HOM05D003299 ORTHO05D003811 2.1e-06 55.5 73 47.9
HPP92_020760 Vanilla planifolia HOM05D003299 ORTHO05D003811 2.1e-06 55.5 74 44.6
arahy.Tifrunner.gnm1.ann1.A87VPW Arachis hypogaea HOM05D003299 ORTHO05D003811 2.7e-06 55.1 72 44.4
arahy.Tifrunner.gnm1.ann1.JYTW4X Arachis hypogaea HOM05D003299 ORTHO05D003811 2.7e-06 55.1 72 44.4
CARHR209020 Cardamine hirsuta HOM05D003299 ORTHO05D003811 2.7e-06 55.1 58 53.4
Thhalv10014762m.g Eutrema salsugineum HOM05D003299 ORTHO05D003811 2.7e-06 55.1 58 53.4
FAN03G3169 Fragaria x ananassa HOM05D003299 ORTHO05D003811 2.7e-06 55.1 72 45.8
SMO265G0009 Selaginella moellendorffii HOM05D003299 ORTHO05D003811 2.7e-06 55.1 63 44.4
Haze_16847 Corylus avellana HOM05D003299 ORTHO05D003811 3.5e-06 54.7 56 53.6
Nn2g13758 Nelumbo nucifera HOM05D003299 ORTHO05D003811 3.5e-06 54.7 55 54.5
PSO801G0679 Papaver somniferum HOM05D003299 ORTHO05D003811 3.5e-06 54.7 74 44.6
Cc02_g11050 Coffea canephora HOM05D003299 ORTHO05D003811 4.6e-06 54.3 56 55.4
Lsat_1_v5_gn_5_164480 Lactuca sativa HOM05D003299 ORTHO05D003811 4.6e-06 54.3 74 40.5
Nn2g11556 Nelumbo nucifera HOM05D003299 ORTHO05D003811 4.6e-06 54.3 74 43.2
SMO296G0030 Selaginella moellendorffii HOM05D003299 ORTHO05D003811 4.6e-06 54.3 58 51.7
SGA_v2.0_scaffold105G30497 Striga asiatica HOM05D003299 ORTHO05D003811 4.6e-06 54.3 75 42.7
unitig_578.g16265 Utricularia gibba HOM05D003299 ORTHO05D003811 4.6e-06 54.3 60 50.0
FAN01G0418 Fragaria x ananassa HOM05D003299 ORTHO05D003811 6.0e-06 53.9 72 44.4
FAN10G1005 Fragaria x ananassa HOM05D003299 ORTHO05D003811 6.0e-06 53.9 72 44.4
FAN10G4229 Fragaria x ananassa HOM05D003299 ORTHO05D003811 6.0e-06 53.9 72 44.4
Lalb_Chr21g0313761 Lupinus albus HOM05D003299 ORTHO05D003811 6.0e-06 53.9 72 45.8
Os02g0819200 Oryza sativa ssp. japonica HOM05D003299 ORTHO05D003811 6.0e-06 53.9 72 45.8
A10p31900 Brassica napus HOM05D003299 ORTHO05D003811 7.9e-06 53.5 65 47.7
C09p72610 Brassica napus HOM05D003299 ORTHO05D003811 7.9e-06 53.5 65 47.7
Sp6g38490 Schrenkiella parvula HOM05D003299 ORTHO05D003811 7.9e-06 53.5 58 50.0
THA.LOC104816424 Tarenaya hassleriana HOM05D003299 ORTHO05D003811 7.9e-06 53.5 74 45.9


User provided reference genes

Program Settings