Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0017666 Camellia sinensis var. sinensis HOM05D007258 ORTHO05D008852 3.4e-101 371.7 193 100.0
Hma1.2p1_0069F.1_g037420 Hydrangea macrophylla HOM05D007258 ORTHO05D008852 7.7e-77 290.8 193 76.7
Rhsim08G0075900 Rhododendron simsii HOM05D007258 ORTHO05D008852 7.7e-77 290.8 193 81.9
CAN.G497.87 Capsicum annuum HOM05D007258 ORTHO05D008852 1.2e-74 283.5 189 75.1
Nitab4.5_0009044g0050 Nicotiana tabacum HOM05D007258 ORTHO05D008852 2.1e-74 282.7 189 75.1
Lsat_1_v5_gn_4_173160 Lactuca sativa HOM05D007258 ORTHO05D008852 1.1e-72 276.9 191 72.8
QL02p066408 Quercus lobata HOM05D007258 ORTHO05D008852 2.2e-71 272.7 184 75.5
Manes.02G057800 Manihot esculenta HOM05D007258 ORTHO05D008852 2.8e-71 272.3 173 76.9
PGSC0003DMG400001370 Solanum tuberosum HOM05D007258 ORTHO05D008852 3.1e-70 268.9 186 72.6
Sopen02g033890 Solanum pennellii HOM05D007258 ORTHO05D008852 4.1e-70 268.5 175 74.9
ECA232G3790 Erigeron canadensis HOM05D007258 ORTHO05D008852 6.9e-70 267.7 191 70.2
SGA_v2.0_scaffold148G36428 Striga asiatica HOM05D003455 ORTHO05D004165 9.1e-70 267.3 175 76.6
Cc07_g04400 Coffea canephora HOM05D007258 ORTHO05D008852 1.2e-69 266.9 186 74.2
Nn4g23475 Nelumbo nucifera HOM05D007258 ORTHO05D008852 2.6e-69 265.8 186 70.4
Haze_25378 Corylus avellana HOM05D007258 ORTHO05D008852 3.4e-69 265.4 176 75.0
Solyc02g089100.3 Solanum lycopersicum HOM05D007258 ORTHO05D008852 4.5e-69 265.0 170 75.9
HanXRQChr09g0264921 Helianthus annuus HOM05D007258 ORTHO05D008852 5.9e-69 264.6 195 69.2
MELO3C022042.2 Cucumis melo HOM05D007258 ORTHO05D008852 1.0e-68 263.8 176 72.7
CsaV3_5G038620 Cucumis sativus L. HOM05D007258 ORTHO05D008852 2.9e-68 262.3 176 72.7
unitig_32.g11768 Utricularia gibba HOM05D007258 ORTHO05D008852 2.9e-68 262.3 190 69.5
Potri.004G116800 Populus trichocarpa HOM05D007258 ORTHO05D008852 5.0e-68 261.5 175 70.3
Migut.K01261 Erythranthe guttata HOM05D007258 ORTHO05D008852 2.5e-67 259.2 186 69.9
CiPaw.03G085000 Carya illinoinensis HOM05D007258 ORTHO05D008852 5.5e-67 258.1 191 68.6
Cpa.g.sc14.201 Carica papaya HOM05D007258 ORTHO05D008852 7.2e-67 257.7 176 71.0
Sc11g0008720 Simmondsia chinensis HOM05D007258 ORTHO05D008852 7.2e-67 257.7 176 72.2
THA.LOC104802980 Tarenaya hassleriana HOM05D007258 ORTHO05D008852 7.2e-67 257.7 174 72.4
MD17G1063700 Malus domestica HOM05D007258 ORTHO05D008852 9.4e-67 257.3 189 72.0
Aa31LG5G12750 Aethionema arabicum HOM05D007258 ORTHO05D008852 1.6e-66 256.5 173 71.1
CANSAT64G1331 Cannabis sativa HOM05D007258 ORTHO05D008852 2.7e-66 255.8 189 68.8
Thecc.04G103600 Theobroma cacao HOM05D007258 ORTHO05D008852 6.1e-66 254.6 176 69.9
Duzib138G1000 Durio zibethinus HOM05D007258 ORTHO05D008852 7.9e-66 254.2 176 70.5
Gohir.D07G187600 Gossypium hirsutum HOM05D007258 ORTHO05D008852 7.9e-66 254.2 176 69.9
HPP92_001847 Vanilla planifolia HOM05D007258 ORTHO05D008852 7.9e-66 254.2 151 79.5
Sabra04G0070300 Salix brachista HOM05D000830 ORTHO05D008852 1.8e-65 253.1 175 68.6
Thhalv10021265m.g Eutrema salsugineum HOM05D007258 ORTHO05D008852 2.3e-65 252.7 173 70.5
Gorai.001G208500 Gossypium raimondii HOM05D007258 ORTHO05D008852 3.0e-65 252.3 176 69.9
Glyma.13G053500 Glycine max HOM05D007258 ORTHO05D008852 3.9e-65 251.9 191 68.1
Psat1g066400 Pisum sativum HOM05D007258 ORTHO05D008852 3.9e-65 251.9 174 73.0
MSTRG.15441 Avicennia marina HOM05D007258 ORTHO05D008852 6.7e-65 251.1 190 68.4
BcaC05g30335 Brassica carinata HOM05D007258 ORTHO05D008852 1.1e-64 250.4 173 70.5
A05p45100 Brassica napus HOM05D007258 ORTHO05D008852 1.1e-64 250.4 173 70.5
C09p75600 Brassica napus HOM05D007258 ORTHO05D008852 1.1e-64 250.4 173 70.5
BolC5t35098H Brassica oleracea HOM05D007258 ORTHO05D008852 1.1e-64 250.4 173 70.5
BraA05t23151Z Brassica rapa HOM05D007258 ORTHO05D008852 1.1e-64 250.4 173 70.5
TPR.G4313 Trifolium pratense HOM05D007258 ORTHO05D008852 1.1e-64 250.4 174 71.8
Ca_20770_v3 Cicer arietinum L. HOM05D000600 ORTHO05D000432 1.5e-64 250.0 157 78.3
Phvul.004G041100 Phaseolus vulgaris HOM05D007258 ORTHO05D008852 1.5e-64 250.0 171 71.3
PGR004G1744 Punica granatum HOM05D007258 ORTHO05D008852 2.0e-64 249.6 172 70.3
VMungo0464G1058 Vigna mungo HOM05D007258 ORTHO05D008852 2.0e-64 249.6 171 70.8
arahy.Tifrunner.gnm1.ann1.GI8EHX Arachis hypogaea HOM05D007258 ORTHO05D008852 2.6e-64 249.2 168 73.8
Ciclev10012686m.g Citrus clementina HOM05D007258 ORTHO05D008852 2.6e-64 249.2 176 69.3
AL3G11470 Arabidopsis lyrata HOM05D007258 ORTHO05D008852 3.3e-64 248.8 173 69.9
CARHR076190 Cardamine hirsuta HOM05D007258 ORTHO05D008852 3.3e-64 248.8 173 68.2
arahy.Tifrunner.gnm1.ann1.TJ02B2 Arachis hypogaea HOM05D007258 ORTHO05D008852 4.4e-64 248.4 168 73.8
AUR62009496 Chenopodium quinoa HOM05D007258 ORTHO05D008852 4.4e-64 248.4 190 66.8
Prupe.3G250800 Prunus persica HOM05D007258 ORTHO05D008852 4.4e-64 248.4 170 71.8
BcaC05g30334 Brassica carinata HOM05D007258 ORTHO05D008852 5.7e-64 248.1 174 70.1
Carub.0003s0134 Capsella rubella HOM05D007258 ORTHO05D008852 5.7e-64 248.1 173 69.9
RcHm_v2.0_Chr2g0165201 Rosa chinensis HOM05D007258 ORTHO05D008852 5.7e-64 248.1 170 70.0
MD17G1063100 Malus domestica HOM05D007258 ORTHO05D008852 7.4e-64 247.7 199 67.3
Sp3g01290 Schrenkiella parvula HOM05D007258 ORTHO05D008852 7.4e-64 247.7 173 69.4
Lalb_Chr21g0318311 Lupinus albus HOM05D007258 ORTHO05D008852 9.7e-64 247.3 170 70.6
Hund16216 Selenicereus undatus HOM05D007258 ORTHO05D008852 1.3e-63 246.9 194 70.6
Glyma.19G033200 Glycine max HOM05D007258 ORTHO05D008852 1.7e-63 246.5 163 74.2
Lj2g0017705 Lotus japonicus HOM05D007258 ORTHO05D008852 4.8e-63 245.0 143 79.7
Medtr6g015855 Medicago truncatula HOM05D007258 ORTHO05D008852 4.8e-63 245.0 172 67.4
GSVIVG01036568001 Vitis vinifera HOM05D007258 ORTHO05D008852 4.8e-63 245.0 176 70.5
AT3G02220 Arabidopsis thaliana HOM05D007258 ORTHO05D008852 8.2e-63 244.2 173 68.8
COL.COLO4_03895 Corchorus olitorius HOM05D007258 ORTHO05D008852 2.4e-62 242.7 137 81.0
Aqoxy3G00517 Aquilegia oxysepala HOM05D007258 ORTHO05D008852 4.1e-62 241.9 196 65.3
Cfa010690 Carpinus fangiana HOM05D007258 ORTHO05D008852 1.2e-61 240.4 136 82.4
Sed0003620 Sechium edule HOM05D007258 ORTHO05D008852 2.0e-61 239.6 186 64.5
Oeu004419.1 Olea europaea HOM05D007258 ORTHO05D008852 5.9e-61 238.0 137 81.0
PSO478G0672 Papaver somniferum HOM05D007258 ORTHO05D008852 7.7e-61 237.7 182 65.9
TWI34G1392 Tripterygium wilfordii HOM05D007258 ORTHO05D008852 1.0e-60 237.3 173 68.2
PSO017G7301 Papaver somniferum HOM05D007258 ORTHO05D008852 1.7e-60 236.5 167 68.3
EL10Ac2g04457 Beta vulgaris HOM05D007258 ORTHO05D008852 4.7e-58 228.4 219 62.1
FvH4_6g46551 Fragaria vesca HOM05D007258 ORTHO05D008852 6.1e-58 228.0 170 66.5
FAN05G4223 Fragaria x ananassa HOM05D000830 ORTHO05D008852 6.1e-58 228.0 170 66.5
Os01g0763000 Oryza sativa ssp. japonica HOM05D007258 ORTHO05D008852 1.0e-57 227.3 173 62.4
FAN02G1393 Fragaria x ananassa HOM05D000830 ORTHO05D008852 1.8e-57 226.5 164 67.1
CDE07G1188 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 2.6e-56 222.6 185 61.6
Eucgr.L02288 Eucalyptus grandis HOM05D007258 ORTHO05D008852 4.4e-56 221.9 205 56.6
Haze_03284 Corylus avellana HOM05D007258 ORTHO05D008852 5.7e-56 221.5 170 67.6
SEGI_41097 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 7.4e-56 221.1 191 63.9
FAN14G1076 Fragaria x ananassa HOM05D000830 ORTHO05D008852 8.2e-55 217.6 182 61.0
TAR374G0815 Trochodendron aralioides HOM05D007258 ORTHO05D008852 1.4e-54 216.9 163 68.7
Gohir.A07G181100 Gossypium hirsutum HOM05D007258 ORTHO05D008852 2.0e-53 213.0 176 59.1
Zm00001eb152360 Zea mays HOM05D007258 ORTHO05D008852 1.5e-51 206.8 133 66.9
Eucgr.I02051 Eucalyptus grandis HOM05D007258 ORTHO05D008852 3.2e-51 205.7 167 63.5
Haze_14398 Corylus avellana HOM05D000041 ORTHO05D000061 5.5e-51 204.9 149 67.8
MD17G1063300 Malus domestica HOM05D007258 ORTHO05D008852 9.4e-51 204.1 113 78.8
Actinidia17595 Actinidia chinensis HOM05D007258 ORTHO05D008852 4.4e-48 195.3 187 58.3
Nitab4.5_0005120g0080 Nicotiana tabacum HOM05D007258 ORTHO05D008852 3.7e-47 192.2 193 58.5
Pp3c24_10 Physcomitrium patens HOM05D007258 ORTHO05D008852 7.0e-46 188.0 179 53.6
FAN09G2101 Fragaria x ananassa HOM05D000830 ORTHO05D008852 1.5e-43 180.3 147 63.9
CDE04G0513 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 1.2e-40 170.6 139 63.3
MD09G1072600 Malus domestica HOM05D007258 ORTHO05D008852 7.5e-40 167.9 169 51.5
CBR_g1012 Chara braunii HOM05D007258 ORTHO05D008852 1.0e-36 157.5 143 54.5
Atru.BG.153.p Acer truncatum HOM05D007258 ORTHO05D008852 9.5e-35 151.0 82 79.3
AagrBONN_evm.TU.Sc2ySwM_117.3322 Anthoceros agrestis HOM05D007258 ORTHO05D008852 4.0e-33 145.6 153 51.0
vmacro18138 Vaccinium macrocarpon HOM05D007258 ORTHO05D008852 3.5e-29 132.5 108 76.9
ClCG11G004890 Citrullus lanatus HOM05D007258 ORTHO05D008852 1.1e-27 127.5 65 81.5
BcaB03g16148 Brassica carinata HOM05D007258 ORTHO05D008852 6.1e-26 121.7 82 67.1
SEGI_23358 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 1.0e-20 104.4 123 55.3
Actinidia26259 Actinidia chinensis HOM05D007258 ORTHO05D008852 3.9e-20 102.4 94 67.0
Lsat_1_v5_gn_4_141000 Lactuca sativa HOM05D007258 ORTHO05D008852 5.0e-20 102.1 67 68.7
ATR0037G004 Amborella trichopoda HOM05D007258 ORTHO05D008852 4.0e-17 92.4 51 78.4
Lsat_1_v5_gn_7_113001 Lactuca sativa HOM05D007258 ORTHO05D008852 1.2e-16 90.9 62 67.7
ATR0037G029 Amborella trichopoda HOM05D007258 ORTHO05D008852 2.0e-16 90.1 103 56.3
Migut.I00106 Erythranthe guttata HOM05D007258 ORTHO05D008852 1.7e-07 60.5 37 70.3
MCO01G001 Micromonas commoda HOM05D007258 ORTHO05D008852 1.4e-06 57.4 94 34.0
Ah.10g038080 Amaranthus hybridus HOM05D007258 ORTHO05D008852 7.1e-06 55.1 26 88.5


User provided reference genes

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